Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J02
(420 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 84 6e-17
AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 84 6e-17
AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 84 6e-17
BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 36 0.017
AE014297-4130|AAF56715.1| 448|Drosophila melanogaster CG13972-P... 31 0.47
BT001868-1|AAN71638.1| 538|Drosophila melanogaster SD03344p pro... 30 1.4
AY061209-1|AAL28757.1| 538|Drosophila melanogaster LD15705p pro... 30 1.4
AE014297-3719|AAZ52545.1| 538|Drosophila melanogaster CG33095-P... 30 1.4
AE014297-3718|AAF56400.2| 538|Drosophila melanogaster CG33095-P... 30 1.4
AE014134-1522|AAF52682.1| 226|Drosophila melanogaster CG13087-P... 30 1.4
>X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal
protein protein.
Length = 239
Score = 84.2 bits (199), Expect = 6e-17
Identities = 45/100 (45%), Positives = 59/100 (59%)
Frame = +2
Query: 119 LPTVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFQRAEQYVKEYRIEERDEIR 298
LP VPES + LK+ + ++KE RAE+Y EY E+ EI+
Sbjct: 1 LPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREIK 60
Query: 299 LARQARNRGNYYVPGEAKLAFVIRIRGVNQVSAKVRTVLQ 418
L R A+ R +YVP EAKLAFV+RIRG+N+V+ KVR VLQ
Sbjct: 61 LRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQ 100
>AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p
protein.
Length = 252
Score = 84.2 bits (199), Expect = 6e-17
Identities = 45/100 (45%), Positives = 59/100 (59%)
Frame = +2
Query: 119 LPTVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFQRAEQYVKEYRIEERDEIR 298
LP VPES + LK+ + ++KE RAE+Y EY E+ EI+
Sbjct: 14 LPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREIK 73
Query: 299 LARQARNRGNYYVPGEAKLAFVIRIRGVNQVSAKVRTVLQ 418
L R A+ R +YVP EAKLAFV+RIRG+N+V+ KVR VLQ
Sbjct: 74 LRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQ 113
>AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA
protein.
Length = 252
Score = 84.2 bits (199), Expect = 6e-17
Identities = 45/100 (45%), Positives = 59/100 (59%)
Frame = +2
Query: 119 LPTVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFQRAEQYVKEYRIEERDEIR 298
LP VPES + LK+ + ++KE RAE+Y EY E+ EI+
Sbjct: 14 LPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREIK 73
Query: 299 LARQARNRGNYYVPGEAKLAFVIRIRGVNQVSAKVRTVLQ 418
L R A+ R +YVP EAKLAFV+RIRG+N+V+ KVR VLQ
Sbjct: 74 LRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQ 113
>BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p
protein.
Length = 227
Score = 36.3 bits (80), Expect = 0.017
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = -3
Query: 418 LQYRAYLG*YLVDTTNTDDKC*FSFTGHIIIATVTSLSCQSDFITLLDAVFFDILFGS 245
LQ A LG +LVDT +TDDK F GH+ + + + Q D V +L G+
Sbjct: 84 LQNLADLGSHLVDTADTDDKGQFGLGGHVELVALLGQATQLDLALFRLDVLILVLLGA 141
>AE014297-4130|AAF56715.1| 448|Drosophila melanogaster CG13972-PA
protein.
Length = 448
Score = 31.5 bits (68), Expect = 0.47
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +2
Query: 188 QITLKRRSASIKKRKEIFQRAEQYVKEYRIEERDEIRL 301
++ + + ++K KEI++ YV+EYR ++ +E RL
Sbjct: 367 ELRILEQKKLLQKHKEIYEERMTYVQEYRAQKEEEQRL 404
>BT001868-1|AAN71638.1| 538|Drosophila melanogaster SD03344p
protein.
Length = 538
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 RHSELAVFRSHSRGVPLPLRRGKKSFREP---NNMSKNTASRSVMKSDWQDRLVTVAIIM 335
RHS L++ +PL +RR + REP N+S + + R+V K D V A ++
Sbjct: 422 RHSSLSIPTQSKDELPLNIRRLSEQIREPPLEKNISLSLSDRNVSKIPTSDG-VGEAHLV 480
Query: 336 CPVKLN 353
P K++
Sbjct: 481 APHKMD 486
>AY061209-1|AAL28757.1| 538|Drosophila melanogaster LD15705p
protein.
Length = 538
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 RHSELAVFRSHSRGVPLPLRRGKKSFREP---NNMSKNTASRSVMKSDWQDRLVTVAIIM 335
RHS L++ +PL +RR + REP N+S + + R+V K D V A ++
Sbjct: 422 RHSSLSIPTQSKDELPLNIRRLSEQIREPPLEKNISLSLSDRNVSKIPTSDG-VGEAHLV 480
Query: 336 CPVKLN 353
P K++
Sbjct: 481 APHKMD 486
>AE014297-3719|AAZ52545.1| 538|Drosophila melanogaster CG33095-PB,
isoform B protein.
Length = 538
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 RHSELAVFRSHSRGVPLPLRRGKKSFREP---NNMSKNTASRSVMKSDWQDRLVTVAIIM 335
RHS L++ +PL +RR + REP N+S + + R+V K D V A ++
Sbjct: 422 RHSSLSIPTQSKDELPLNIRRLSEQIREPPLEKNISLSLSDRNVSKIPTSDG-VGEAHLV 480
Query: 336 CPVKLN 353
P K++
Sbjct: 481 APHKMD 486
>AE014297-3718|AAF56400.2| 538|Drosophila melanogaster CG33095-PA,
isoform A protein.
Length = 538
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 RHSELAVFRSHSRGVPLPLRRGKKSFREP---NNMSKNTASRSVMKSDWQDRLVTVAIIM 335
RHS L++ +PL +RR + REP N+S + + R+V K D V A ++
Sbjct: 422 RHSSLSIPTQSKDELPLNIRRLSEQIREPPLEKNISLSLSDRNVSKIPTSDG-VGEAHLV 480
Query: 336 CPVKLN 353
P K++
Sbjct: 481 APHKMD 486
>AE014134-1522|AAF52682.1| 226|Drosophila melanogaster CG13087-PA
protein.
Length = 226
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 126 LFPNQS*STVKGGRHSELAVFRSHSRGVPLPLRRGKKS 239
L P+Q+ + GRH L +S SRG+ L+R K S
Sbjct: 2 LLPDQTYADYDVGRHQLLTYHKSRSRGLKSKLQRSKSS 39
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,038,200
Number of Sequences: 53049
Number of extensions: 380131
Number of successful extensions: 893
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -