Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I24
         (455 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    27   0.083
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    25   0.34 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   1.8  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   4.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     20   9.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    20   9.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           20   9.5  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    20   9.5  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 27.1 bits (57), Expect = 0.083
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 197 YPPRLPPTSKPTEDIGPSESADTTTEKI 280
           YPPR PP  +P+    P  ++D+   ++
Sbjct: 29  YPPRCPPIYEPSCQYSPVSNSDSENSEV 56


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 25.0 bits (52), Expect = 0.34
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +3

Query: 144 FHQCHHLTMNKKQLYESRIRHVYHQHQNPQKTLVLVNQ 257
           F   ++L + K+ ++E RIR +Y+Q   P   + + +Q
Sbjct: 38  FGSFYNLVIRKEHIFE-RIRTIYNQFSTPYVGIYIFHQ 74


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 239 CLLWVLMLVVDVA 201
           C LWVL+L+ ++A
Sbjct: 176 CYLWVLILICNIA 188


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 204 HVYHQHQNPQ 233
           H+Y  H NPQ
Sbjct: 89  HIYDMHHNPQ 98


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 57  CYYTMLIQEIIPDLLYHFLREEYLN 131
           C YT+LI+  I +L    +   +LN
Sbjct: 181 CSYTVLIRNKISNLNTSLIHSTHLN 205


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 12/48 (25%), Positives = 19/48 (39%)
 Frame = +2

Query: 194 SYPPRLPPTSKPTEDIGPSESADTTTEKIIIVYPIDQAPPLSITESTN 337
           S PP    +++PT    P++     T    + YP      +S T   N
Sbjct: 329 SPPPPYQISAQPTPSQSPNQIYQPVTNLTNLTYPSYYNQDVSCTHYQN 376


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 357  CCFC*TPFV 331
            C FC TPF+
Sbjct: 1056 CAFCDTPFI 1064


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +3

Query: 183 LYESRIRHVYHQHQN 227
           + + ++++ YH HQN
Sbjct: 55  IQQQQLQYGYHNHQN 69


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +3

Query: 183 LYESRIRHVYHQHQN 227
           + + ++++ YH HQN
Sbjct: 55  IQQQQLQYGYHNHQN 69


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +3

Query: 183 LYESRIRHVYHQHQN 227
           + + ++++ YH HQN
Sbjct: 55  IQQQQLQYGYHNHQN 69


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +3

Query: 183 LYESRIRHVYHQHQN 227
           + + ++++ YH HQN
Sbjct: 55  IQQQQLQYGYHNHQN 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,299
Number of Sequences: 336
Number of extensions: 2030
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)