Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I24
(455 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g10620.1 68414.m01204 protein kinase family protein contains ... 32 0.16
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 32 0.21
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 29 1.1
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 29 1.1
At2g36560.1 68415.m04484 DNA-binding protein-related contains Pf... 29 1.5
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 28 2.6
At3g26120.1 68416.m03257 RNA-binding protein, putative similar t... 28 2.6
At4g22753.1 68417.m03284 sterol desaturase family protein simila... 28 3.4
At5g67640.1 68418.m08528 expressed protein ; expression support... 27 4.5
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 27 4.5
At4g29440.1 68417.m04203 expressed protein contains Pfam profil... 27 4.5
At4g02900.1 68417.m00392 early-responsive to dehydration protein... 27 6.0
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 27 6.0
At1g55600.1 68414.m06364 WRKY family transcription factor simila... 27 6.0
At4g37650.1 68417.m05325 short-root transcription factor (SHR) 27 7.9
At4g22756.1 68417.m03285 sterol desaturase family protein simila... 27 7.9
At3g45860.1 68416.m04963 receptor-like protein kinase, putative ... 27 7.9
At1g47240.1 68414.m05230 NRAMP metal ion transporter 2, putative... 27 7.9
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 32.3 bits (70), Expect = 0.16
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 194 SYPPRLPPTSKPTEDIGPSESADTTTEKIIIVYPIDQAPPLSITESTNGVQQ 349
S PP + P P + P +S T ++I +P Q PP S+ + V Q
Sbjct: 85 SPPPSITPPPSPPQPQPPPQSTPTGDSPVVIPFPKPQLPPPSLFPPPSLVNQ 136
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 31.9 bits (69), Expect = 0.21
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +2
Query: 194 SYPPRLPPTSKPTEDIGPSESADTTTEKIIIVYPI----DQAPPLSITESTNGVQQKQQI 361
S PP PP+S P + PS S + P PPLS++ S+
Sbjct: 66 SSPPPPPPSSSPLSSLSPSLSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSS 125
Query: 362 PMYNSIPASQSSGFQS 409
P+ + P+S SS + +
Sbjct: 126 PLSSLSPSSSSSTYSN 141
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 194 SYPPRLPPTSKPTEDIGPSESADTTTEKIIIVY 292
S PP PP+S P + PS S+ T + + + Y
Sbjct: 115 SSPPPPPPSSSPLSSLSPSSSSSTYSNQTNLDY 147
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 29.5 bits (63), Expect = 1.1
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Frame = +2
Query: 161 PDDEQETIIRISYPPRLPPTSKP-TEDIGPSESA--DTTTEKIIIVYPIDQAPPLSITES 331
P Q I I+ P + P + P P ++ +++ + P PP ++T S
Sbjct: 1909 PQPRQPLISNIAPTPSVTPATNPGLRSPAPHLNSYRPSSSTPVATATPTSSVPPQALTYS 1968
Query: 332 TNGVQQKQQIPMYNSIPASQSSGFQSIN 415
+QQ+Q+ S+ SSG QS N
Sbjct: 1969 AVSIQQQQEQQPQQSL----SSGLQSNN 1992
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 29.5 bits (63), Expect = 1.1
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Frame = +2
Query: 161 PDDEQETIIRISYPPRLPPTSKP-TEDIGPSESA--DTTTEKIIIVYPIDQAPPLSITES 331
P Q I I+ P + P + P P ++ +++ + P PP ++T S
Sbjct: 1909 PQPRQPLISNIAPTPSVTPATNPGLRSPAPHLNSYRPSSSTPVATATPTSSVPPQALTYS 1968
Query: 332 TNGVQQKQQIPMYNSIPASQSSGFQSIN 415
+QQ+Q+ S+ SSG QS N
Sbjct: 1969 AVSIQQQQEQQPQQSL----SSGLQSNN 1992
>At2g36560.1 68415.m04484 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 574
Score = 29.1 bits (62), Expect = 1.5
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +2
Query: 215 PTSKPTEDIGPSESADTTTEKIIIVYPIDQAPPLSITESTNG-VQQKQQI-PMYNSIPAS 388
P +P E +GPS S +E PP ++ S+ G VQ I P ++
Sbjct: 339 PVQQP-EMVGPSHSQKRNSESNRTTVVFSATPPNTLASSSTGQVQGPDMIGPSHSQEKKD 397
Query: 389 QSSGFQSINRPXAP 430
+S+ ++ P AP
Sbjct: 398 ESNNAMAVFSPTAP 411
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 215 PTSKPTEDIGPSESADTTTEKIIIVYPIDQAPPLSITESTNG-VQQKQQI-PMYNSIPAS 388
P +P E +GPS S +E + + PP ++ S+ G VQQ + + P ++ S
Sbjct: 257 PVQQP-EMVGPSHSQKRNSESNRTMVVLSATPPNTLASSSTGPVQQPEMVGPSHSQKRNS 315
Query: 389 QSS 397
+S+
Sbjct: 316 ESN 318
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 215 PTSKPTEDIGPSESADTTTEKIIIVYPIDQAPPLSITESTNG-VQQKQQI-PMYNSIPAS 388
P +P E +GPS S +E + + PP ++ S+ G VQQ + + P ++ S
Sbjct: 298 PVQQP-EMVGPSHSQKRNSESNKTMVVLSATPPNTLASSSTGPVQQPEMVGPSHSQKRNS 356
Query: 389 QSS 397
+S+
Sbjct: 357 ESN 359
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding protein,
C-terminal domain
Length = 1060
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 102 YHFLREEYLNHLSLFHQCHHLTMNKKQLYESRIRHVYHQHQNPQKTL 242
Y L + L H + C HL +N+ + I +Y H P+K L
Sbjct: 999 YRKLTVQNLKHELTKYDCGHLLLNRGHQNKKEILALYEAHVLPKKAL 1045
>At3g26120.1 68416.m03257 RNA-binding protein, putative similar to
GB:AAC39463 from [Zea mays], PF00076 RNA recognition
motif (2 copies)
Length = 615
Score = 28.3 bits (60), Expect = 2.6
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Frame = +2
Query: 200 PPRLPPTSKPTE-DIGPSESADTTTEKI-----IIVYPIDQAPPLSITESTNGVQQKQQI 361
PP+LPP P+ + P+E T I + P Q PP NGV Q++
Sbjct: 38 PPQLPPPLPPSSYGLSPTEPRVFTFFNIPPHPMMFSPPPPQPPPPPPRPCFNGVSAAQRL 97
Query: 362 PMYNSIPASQSS 397
P+ ++ P S
Sbjct: 98 PLPSNTPTRSLS 109
>At4g22753.1 68417.m03284 sterol desaturase family protein similar
to sterol 4-alpha-methyl-oxidase GI:16973471 from
[Arabidopsis thaliana]; contains Pfam profile PF01598:
Sterol desaturase
Length = 291
Score = 27.9 bits (59), Expect = 3.4
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 75 IQEIIPDLLYHFLREEYLNHLSLFHQCHHLTMNKKQLYESRIRHVYHQHQNP 230
+ EI+ L+ +FL E+Y N+ H M+ K YE +I ++H++ +P
Sbjct: 121 LMEIVAQLVVYFLIEDYTNYWI------HRWMHCKWGYE-KIHRIHHEYTSP 165
>At5g67640.1 68418.m08528 expressed protein ; expression supported
by MPSS
Length = 201
Score = 27.5 bits (58), Expect = 4.5
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 176 ETIIRISYPPRLPPTSKPTEDIGPSESADTTTEKIIIVYPIDQAPPLSITESTNG 340
E +++ YPP PP+S P+ P E D + ++ P D L I S +G
Sbjct: 13 EALLQTLYPPSSPPSS-PSYSPPPVEVVDNEPFDVSLINPEDY---LKIDSSNHG 63
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical
to cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 27.5 bits (58), Expect = 4.5
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 215 PTSKPTEDIG---PSESADTTTEKIIIVYPIDQAPPLSITESTNGVQQKQQIPMYNSIPA 385
P K ED PS +A+ +T + +V PI++ PP + + + Q+ + N A
Sbjct: 498 PLRKHCEDASRVLPS-NAENSTNSLPVVKPINELPPKDVKQILQSPKMSPQLVLTNKHVA 556
Query: 386 SQ 391
Q
Sbjct: 557 GQ 558
>At4g29440.1 68417.m04203 expressed protein contains Pfam profile:
PF03398 eukaryotic protein of unknown function, DUF292
Length = 1090
Score = 27.5 bits (58), Expect = 4.5
Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +2
Query: 200 PPRLPPTSKPTEDIGPSESADTTTEKIIIVYPIDQAPPLSITESTNGVQQKQQIPMYNSI 379
PP+L P KP S S+ + K P +PP + + +Q+ +S+
Sbjct: 956 PPKLVPKEKPAAKQRGSASSLSFLPKTDKASPDQDSPPKLLPKEKPAAKQQGSATSSSSL 1015
Query: 380 PASQS-SGFQSINRPXAPERK 439
P ++ S ++ PE K
Sbjct: 1016 PKTEKISHYRESPSKLTPEAK 1036
>At4g02900.1 68417.m00392 early-responsive to dehydration
protein-related / ERD protein-related similar to ERD4
protein (early-responsive to dehydration stress)
[Arabidopsis thaliana] GI:15375406; contains Pfam
profile PF02714: Domain of unknown function DUF221
Length = 785
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 126 LNHLSLFHQCHHLTMNKKQLYESRIRHVYHQHQNPQKTLVLV 251
+ ++ F C+ L M K + R+RH+ + + P + VLV
Sbjct: 162 MTYVITFWTCYILYMEYKAVANMRLRHLAAESRRPDQLTVLV 203
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 27.1 bits (57), Expect = 6.0
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 200 PPRLPPTSKPTEDIGPSESAD--TTTEKIII 286
PP LPP+S P+ S S+D T T+ ++I
Sbjct: 51 PPLLPPSSNPSPPSNNSSSSDKKTITKAVLI 81
>At1g55600.1 68414.m06364 WRKY family transcription factor similar
to SPF1 protein GI:484261 from [Ipomoea batatas];
contains Pfam profile: PF03106 WRKY DNA -binding domain
Length = 485
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 200 PPRLPPTSKPTEDIGPSESADTTTEKI-IIVYPIDQAPPLSITESTNGVQQKQQIPMYNS 376
PP PP+S E++ P S T + + + I P + + E++ + Q + P N+
Sbjct: 404 PPTPPPSSYTPEEMRPFSSLATEIDLTEVYMTGISMLPNIPVYENSGFMYQNDE-PTMNA 462
Query: 377 IP 382
+P
Sbjct: 463 MP 464
>At4g37650.1 68417.m05325 short-root transcription factor (SHR)
Length = 531
Score = 26.6 bits (56), Expect = 7.9
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 150 QCHHLTMNKKQLYESRIRHVYHQHQNP 230
+C + M+++ L S H +H H NP
Sbjct: 53 ECFNFFMDEEDLSSSSSHHNHHNHNNP 79
>At4g22756.1 68417.m03285 sterol desaturase family protein similar
to sterol 4-alpha-methyl-oxidase GI:16973471 from
[Arabidopsis thaliana]; contains Pfam profile PF01598:
Sterol desaturase
Length = 299
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 81 EIIPDLLYHFLREEYLNHLSLFHQCHHLTMNKKQLYESRIRHVYHQHQNP 230
EI+ L+ +FL E+Y N+ H+ H K YE + H++H++ P
Sbjct: 127 EIVAQLVVYFLVEDYTNY--WVHRFFHC----KWGYE-KFHHIHHEYTAP 169
>At3g45860.1 68416.m04963 receptor-like protein kinase, putative
similar to receptor-like protein kinase 4 (gi:13506745),
5 (gi:13506747), and 6 (gi:13506749) from Arabidopsis
thaliana; contains Pfam protein kinase domain PF00069
Length = 676
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 176 ETIIRISYPPRLPPTSKPTEDI 241
ET R S PP LPP S P + +
Sbjct: 249 ETATRSSSPPSLPPRSTPQQQL 270
>At1g47240.1 68414.m05230 NRAMP metal ion transporter 2, putative
(NRAMP2) similar to metal transporter Nramp3
[Arabidopsis thaliana] gi|6468012|gb|AAF13278; member of
the natural resistance-associated macrophage protein
(NRAMP) metal transporter family, PMID:11500563
Length = 530
Score = 26.6 bits (56), Expect = 7.9
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 200 PPRLPPTSKPTEDIGPSESADTTTEKIIIV 289
PP P S P+ D SE+A T EKI+IV
Sbjct: 18 PPPPPSQSLPSTD-SESEAAFETNEKILIV 46
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,638,351
Number of Sequences: 28952
Number of extensions: 159914
Number of successful extensions: 529
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 752336160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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