Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I23
(437 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45038| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.31
SB_57159| Best HMM Match : PI-PLC-X (HMM E-Value=0) 31 0.31
SB_19649| Best HMM Match : Keratin_B2 (HMM E-Value=0.082) 30 0.73
SB_399| Best HMM Match : Glycos_transf_2 (HMM E-Value=0.96) 29 1.3
SB_40249| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0) 28 2.9
SB_40155| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_40119| Best HMM Match : PA (HMM E-Value=4.3e-14) 27 6.8
SB_58733| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_49264| Best HMM Match : Ank (HMM E-Value=3.7e-22) 27 8.9
SB_48433| Best HMM Match : Ion_trans (HMM E-Value=6.1e-26) 27 8.9
SB_44567| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 27 8.9
SB_24504| Best HMM Match : INCENP_ARK-bind (HMM E-Value=9.9) 27 8.9
SB_8501| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_45038| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 31.5 bits (68), Expect = 0.31
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 41 KRDSQCDKNNNFVEVKAKYGKGKTSSI-SVDSSFAPHDSTLQIKANSPSAEKFKKLE 208
K S + N N KAK KG+TSS+ ++DSSF + T + N E+ ++LE
Sbjct: 356 KEKSLKEANENLWRDKAKLQKGRTSSVHAMDSSF-QQEVTRLVTENVDLREQVERLE 411
>SB_57159| Best HMM Match : PI-PLC-X (HMM E-Value=0)
Length = 1289
Score = 31.5 bits (68), Expect = 0.31
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 164 IKANSPSA-EKFKKLELNIRSKNPSPDTYSNSIIMDADGRVYKSESTIVLSKAHPVLDLQ 340
++ N P+ E+F + ELN + N + + I+D D K E+ LS ++ LD +
Sbjct: 386 VRKNPPARLEEFSEFELNSTASNSESENVKETAIIDDDIEEKKDEN---LSISNFSLDNE 442
Query: 341 YVNPE 355
Y++P+
Sbjct: 443 YISPK 447
>SB_19649| Best HMM Match : Keratin_B2 (HMM E-Value=0.082)
Length = 279
Score = 30.3 bits (65), Expect = 0.73
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 38 YKRDSQCDKNNNFVEVKAKYGKGKTSSISVDSSFAP--HDSTLQIKANSPSAEKFKKLEL 211
Y+R SQ KN ++ AKY S + S P + +T ++ N S ++ K +
Sbjct: 205 YQRTSQVSKNQPSIKQPAKYQTTSQVSNNQPSIKQPAKYQTTSEVPNNKTSIKQKAKYQT 264
Query: 212 NIRSKNPSPDT 244
N PDT
Sbjct: 265 TSLESNEQPDT 275
>SB_399| Best HMM Match : Glycos_transf_2 (HMM E-Value=0.96)
Length = 488
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -2
Query: 436 IVHFEFNFALGRTERTTFHVDSAGLVSFGINVLQIQNRMSLREYDGGFGFI 284
+VHF+FN L R R D G+V L R L ++ G F+
Sbjct: 246 LVHFDFNARLERQIRMISDTDHVGVVGGAFRNLTGHWRCCLEQFSGAMRFL 296
>SB_40249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 297 PPSYSLRLIRFWICNTLIPKLTSPAES 377
PP Y++ F +C+ IPK++SPA +
Sbjct: 107 PPGYTISANDFRLCDKDIPKISSPAST 133
>SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1478
Score = 28.3 bits (60), Expect = 2.9
Identities = 21/77 (27%), Positives = 31/77 (40%)
Frame = +2
Query: 41 KRDSQCDKNNNFVEVKAKYGKGKTSSISVDSSFAPHDSTLQIKANSPSAEKFKKLELNIR 220
K QC N F + K K S S D++L K PS+ L +R
Sbjct: 473 KEARQCQLGNTFPDQKIKLVSRSEESGKRRSRSLDRDTSLTNKKKRPSS-----LPSRVR 527
Query: 221 SKNPSPDTYSNSIIMDA 271
+K+ SP T + ++A
Sbjct: 528 NKSASPSTRKAKVSLEA 544
>SB_40155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -2
Query: 436 IVHFEFNFALGRTERTTFHVDSAGLVSFGINVLQIQNRMSLREYDGGFGFI-DTSISVHY 260
+VHF+FN L R R D G+V L R+ R+ G F ++ HY
Sbjct: 357 LVHFDFNARLERQIRMISDTDHVGVVGGAFRNLTGHWRVGCRQ-SGMFNYVLSFQEGYHY 415
Query: 259 NR 254
+R
Sbjct: 416 SR 417
>SB_40119| Best HMM Match : PA (HMM E-Value=4.3e-14)
Length = 328
Score = 27.1 bits (57), Expect = 6.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 173 NSPSAEKFKKLELNIRSKNPSPDTYSNSIIMDADGRV 283
N +K +K++ ++ P PD + +M+ADGRV
Sbjct: 27 NDYGFDKVEKVKYDVLLSYPDPDKPNTVKLMNADGRV 63
>SB_58733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2060
Score = 27.1 bits (57), Expect = 6.8
Identities = 17/79 (21%), Positives = 34/79 (43%)
Frame = +2
Query: 125 VDSSFAPHDSTLQIKANSPSAEKFKKLELNIRSKNPSPDTYSNSIIMDADGRVYKSESTI 304
+ S F ++ A +PS ++ ++ SP + + + G YK +
Sbjct: 1187 ITSDFEVFRDSVVTTAYAPSRLRYYVADIRYDESPTSP--FPSPSVAPTFGDYYKDRYGV 1244
Query: 305 VLSKAHPVLDLQYVNPETN 361
LS+ P+LD+ +V+ N
Sbjct: 1245 DLSRDQPLLDVDHVSSRLN 1263
>SB_49264| Best HMM Match : Ank (HMM E-Value=3.7e-22)
Length = 775
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 352 GINVLQIQNRMSLREYDGGFGFIDTSISVH 263
G+ +L+++N LR YD + ++SVH
Sbjct: 739 GLPLLEVKNATGLRPYDVAASLANETVSVH 768
>SB_48433| Best HMM Match : Ion_trans (HMM E-Value=6.1e-26)
Length = 1344
Score = 26.6 bits (56), Expect = 8.9
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 190 EIQETRIKHSLKESISRHIQQFYY 261
E+ + +K++LK ++ RHI+ YY
Sbjct: 77 EVAKQDVKNALKGTVERHIEILYY 100
>SB_44567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 332 PEPDEP*RVRWWIRIYRHV 276
PE DE R + W+RI RHV
Sbjct: 644 PEEDEVLRKKLWLRIARHV 662
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 26.6 bits (56), Expect = 8.9
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 3/118 (2%)
Frame = +2
Query: 83 VKAKYGKGKTSSISVDSSFAPH---DSTLQIKANSPSAEKFKKLELNIRSKNPSPDTYSN 253
++++ KG + +P ST ++K ++ + +I S P S+
Sbjct: 2297 LRSRKSKGSVEKVDKTEGGSPKTVLSSTFEVKGKGLGSQPESR---SIPSSPPFASPKSS 2353
Query: 254 SIIMDADGRVYKSESTIVLSKAHPVLDLQYVNPETNKPSRIYVKGSSLSSTQGKIELK 427
S++ +S +T LS+ V LQ P+T KP R + S L T ++K
Sbjct: 2354 SVMQQPRKMSSRSLAT-ALSEGVIVTPLQPSPPDTPKPKRTTHRRSLLKMTSSDEKVK 2410
>SB_24504| Best HMM Match : INCENP_ARK-bind (HMM E-Value=9.9)
Length = 190
Score = 26.6 bits (56), Expect = 8.9
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 128 DSSFAPHDSTLQIKANSPSAEKFKKLELNIRSKNPSPDTYSNSIIMDADGRVYKSESTI 304
DSS + DS + ++ ++E KK + SK PSPDT ++ + K E+TI
Sbjct: 20 DSSSSDSDSENDKEHDTDNSEVTKKQLHSPESKLPSPDTLFATVGRPSFLATTKEENTI 78
>SB_8501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 543
Score = 26.6 bits (56), Expect = 8.9
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +2
Query: 44 RDSQCDKNNNFVEVKAKYGKGKTSSISVDSSFAPHDSTLQIKANSPSAEKFKKLELNIRS 223
R+ D N N E G+ + ++ V S+ + K P+ E EL++ S
Sbjct: 188 RNLNADSNAN--EASQSQGQKRPLTLPVKQEA---QSSSKRKKEDPNMEWSSDSELSVAS 242
Query: 224 KNPSPDTYSNSIIMDADGRV 283
PSP +S I+ GR+
Sbjct: 243 PAPSPSQHSVPDIVSLQGRL 262
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,407,512
Number of Sequences: 59808
Number of extensions: 256515
Number of successful extensions: 738
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 847047381
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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