Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I22
         (507 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0BU22 Cluster: Chromosome undetermined scaffold_128, w...    34   2.1  
UniRef50_Q73L23 Cluster: Putative uncharacterized protein; n=1; ...    33   3.7  
UniRef50_Q7NBS7 Cluster: SpoT; n=1; Mycoplasma gallisepticum|Rep...    33   4.9  
UniRef50_O66532 Cluster: NADH dehydrogenase; n=2; Aquifex|Rep: N...    33   4.9  
UniRef50_A2X023 Cluster: Putative uncharacterized protein; n=9; ...    33   4.9  
UniRef50_Q7RP32 Cluster: Putative uncharacterized protein PY0162...    33   4.9  
UniRef50_O96219 Cluster: Putative uncharacterized protein PFB063...    32   6.5  
UniRef50_Q2CE67 Cluster: Transcriptional regulator, AraC family ...    32   8.6  
UniRef50_A4B379 Cluster: Putative DNA polymerase related protein...    32   8.6  

>UniRef50_A0BU22 Cluster: Chromosome undetermined scaffold_128,
           whole genome shotgun sequence; n=14; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_128,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 2965

 Score = 33.9 bits (74), Expect = 2.1
 Identities = 20/84 (23%), Positives = 36/84 (42%)
 Frame = +3

Query: 201 YKAEVCIADELNDECRVFDQNERYNVYLEETLWTRECAEKIIRNYNGSESLTCFVLTVID 380
           Y+ ++ + D LND C++ +     N+ L+ET+ T+    K+  N N            I 
Sbjct: 148 YQRQIIMYDILNDNCQIINYQSSTNLELKETIITQGGEFKLQLNQNDESKQFAQYPGRIS 207

Query: 381 DPKYKRTLYKLCNNNIVTFKKLLE 452
             +Y      +  N +  FK  +E
Sbjct: 208 KAEYNFDKNNVVFNTVKEFKNFIE 231


>UniRef50_Q73L23 Cluster: Putative uncharacterized protein; n=1;
           Treponema denticola|Rep: Putative uncharacterized
           protein - Treponema denticola
          Length = 227

 Score = 33.1 bits (72), Expect = 3.7
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +1

Query: 244 VEYSTKTNGTMYI*KKPYGPGNALKKSSGIIMGVKVSPVLY 366
           +E   K  GT YI K  YGP N +K  +  + G K+S   Y
Sbjct: 164 IESFLKKEGTEYISKYEYGPENKIKSKTDFVNGNKISYTEY 204


>UniRef50_Q7NBS7 Cluster: SpoT; n=1; Mycoplasma gallisepticum|Rep:
           SpoT - Mycoplasma gallisepticum
          Length = 723

 Score = 32.7 bits (71), Expect = 4.9
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +3

Query: 327 RNYNGSESLTCFVLTVIDDPKYKRTLYKL-CNNNIVTFKKLLEGND 461
           +NY+ S S+T   L    DPK    L K+ C+N+ + F KLLE  D
Sbjct: 409 KNYSLSSSVTALELAYRVDPKQFIFLDKIMCSNDNILFDKLLEDGD 454


>UniRef50_O66532 Cluster: NADH dehydrogenase; n=2; Aquifex|Rep: NADH
           dehydrogenase - Aquifex aeolicus
          Length = 315

 Score = 32.7 bits (71), Expect = 4.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 351 LTCFVLTVIDDPKYKRTLYKLCNNNIVTFKKLL 449
           + C     + +P+  R +Y+LC   +VTFK+LL
Sbjct: 191 VACAYAEALKNPETDRKIYELCGTKVVTFKELL 223


>UniRef50_A2X023 Cluster: Putative uncharacterized protein; n=9;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 556

 Score = 32.7 bits (71), Expect = 4.9
 Identities = 16/71 (22%), Positives = 37/71 (52%)
 Frame = +3

Query: 279 YLEETLWTRECAEKIIRNYNGSESLTCFVLTVIDDPKYKRTLYKLCNNNIVTFKKLLEGN 458
           Y +  +W+R       ++++   ++    + V+D+ +Y   L K+CN+   T ++LL G+
Sbjct: 348 YWKANIWSRPIPAGSWKDWHRECTVDVTDIAVVDNVRYSELLPKICNDPEETLRRLLTGH 407

Query: 459 DDGVMRNDLIN 491
               M  ++I+
Sbjct: 408 PTLGMDGNVIS 418


>UniRef50_Q7RP32 Cluster: Putative uncharacterized protein PY01629;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY01629 - Plasmodium yoelii
           yoelii
          Length = 382

 Score = 32.7 bits (71), Expect = 4.9
 Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
 Frame = +3

Query: 9   LFAMIAVVIEDDCDTLRQRTADAILP-----MLQAKSRVTPSKCSEMFREYVEQCXXXXX 173
           L++ +  ++ D+ + +R +T  AI+      +L   + +    C+E F  Y+        
Sbjct: 106 LYSCLIFMLNDENEAIRYQTKIAIIHFMKKNVLNISNNIKDITCTEFFLYYIS-LYYNKI 164

Query: 174 XXXXXXXXXYKAEVCIADELN-DECRVFDQNERYNVYLEETL 296
                    Y+ + CI D L  +  ++FDQ E+YN+Y+   L
Sbjct: 165 AAYMLNFCIYQVKNCINDSLYYNPPKLFDQ-EKYNLYINNIL 205


>UniRef50_O96219 Cluster: Putative uncharacterized protein PFB0630c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFB0630c - Plasmodium falciparum
           (isolate 3D7)
          Length = 1166

 Score = 32.3 bits (70), Expect = 6.5
 Identities = 18/71 (25%), Positives = 32/71 (45%)
 Frame = +3

Query: 225 DELNDECRVFDQNERYNVYLEETLWTRECAEKIIRNYNGSESLTCFVLTVIDDPKYKRTL 404
           +E ND+ +  DQ E+ NV++++     E  EK +  Y        + L+ +D+ K     
Sbjct: 678 EEKNDQEKKNDQEEKNNVHIDKQEKINENVEKTLNLYQKYSLYNLYDLSKLDESKVVDFF 737

Query: 405 YKLCNNNIVTF 437
           Y     N + F
Sbjct: 738 YDNEKENFINF 748


>UniRef50_Q2CE67 Cluster: Transcriptional regulator, AraC family
           protein; n=3; Rhodobacteraceae|Rep: Transcriptional
           regulator, AraC family protein - Oceanicola granulosus
           HTCC2516
          Length = 274

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 295 YGPGNALKKSSGIIMGVKVSPVLY*QLLMIPN 390
           YGP N +   +G + G++V   +Y Q+L IPN
Sbjct: 60  YGPNNLIFLPAGTMYGMEVGSTVYAQILTIPN 91


>UniRef50_A4B379 Cluster: Putative DNA polymerase related protein;
           n=2; Alteromonadales|Rep: Putative DNA polymerase
           related protein - Alteromonas macleodii 'Deep ecotype'
          Length = 265

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -3

Query: 379 SITVSTKQVRLSLPL*FLMIFSAHSLVHRVSSRYTL-YRSFWSNT 248
           SITV+T Q R ++P   LM+F  ++L H  + R+ L YR  W  T
Sbjct: 51  SITVTTPQKRHAIPKSVLMLFK-YALCHSDAHRFALCYRVLWRVT 94


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,509,858
Number of Sequences: 1657284
Number of extensions: 7749258
Number of successful extensions: 20482
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20481
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)