Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I22
         (507 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   4.8  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   6.3  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.4  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -3

Query: 331 FLMIFSAHSLVHRVSSRYTLYRSFWSNTR 245
           FL+++ + +LV   + +   Y   WS  R
Sbjct: 9   FLLVYFSGALVSATTDKVVCYWGTWSTYR 37


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 423 YYCTVCTKSFYIWDH 379
           Y C +C K+F   DH
Sbjct: 108 YSCDICGKAFRRQDH 122


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 405 YKLCNNNIVTFKKLLEGNDDGV 470
           ++L NNN     K+ +  DD V
Sbjct: 104 WRLLNNNFQQIDKIFKTRDDRV 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,957
Number of Sequences: 336
Number of extensions: 2123
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)