Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I22
         (507 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       24   2.6  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   4.5  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   5.9  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   5.9  
AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical prote...    23   5.9  

>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 225 DELNDECRVFDQNERYNVYLEETLWTRECAEKIIRNYN 338
           DE++DE   FD+N     Y++ T    E A+K +   N
Sbjct: 158 DEIDDENPKFDKNIDDKEYVDPTKIKEELAKKKMEAMN 195


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 24   AVVIEDDCDTLRQRTADAIL 83
            A  I+ +CD  RQRT  +I+
Sbjct: 1407 AEAIDSECDLQRQRTQQSII 1426


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 502 LILGLIRSFLMTPSSLPSSSFLN 434
           ++ GL RSF   P  +P+S  +N
Sbjct: 478 VLFGLKRSFTPGPDGIPASVLIN 500


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 292  PYGPGNALKKSSGIIMGVKVSPV 360
            P GP NA   S   ++  KV PV
Sbjct: 1332 PMGPANAAPSSPAGVLVAKVPPV 1354


>AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical protein
           protein.
          Length = 92

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 357 CFVLTVIDDPKYKRTLYKL 413
           C VL+V D+P  +R + KL
Sbjct: 50  CIVLSVADEPSPERKVQKL 68


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,898
Number of Sequences: 2352
Number of extensions: 8808
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)