Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I22
         (507 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    23   2.4  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    22   4.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   5.6  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 366 LTVIDDPKYKRTLYKLCNNNIVTFKKLLEGNDDGVMRND 482
           +T+ +  K  + L K+C+    T K+LL+G   G    D
Sbjct: 27  MTIEEAKKTIKNLRKVCSKKNDTPKELLDGQFRGEFPQD 65


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 366 LTVIDDPKYKRTLYKLCNNNIVTFKKLLEGNDDGVMRND 482
           +T+ +  K  + L K+C+    T K+LL+G   G    D
Sbjct: 1   MTIEELKKTIKNLRKVCSKKNDTPKELLDGQFRGEFPQD 39


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 42  DCDTLRQRTADAILPM 89
           DCDTL  R  +   P+
Sbjct: 570 DCDTLEYRNGEVTTPL 585


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,956
Number of Sequences: 438
Number of extensions: 2793
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)