Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I21
(459 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical pr... 36 0.011
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 34 0.043
Z75541-6|CAA99857.2| 644|Caenorhabditis elegans Hypothetical pr... 34 0.057
AF440800-1|AAL28139.1| 644|Caenorhabditis elegans transcription... 34 0.057
Z93239-2|CAB07529.2| 1218|Caenorhabditis elegans Hypothetical pr... 31 0.30
Z69660-2|CAD57697.1| 1218|Caenorhabditis elegans Hypothetical pr... 31 0.30
Z75545-6|CAA99888.3| 649|Caenorhabditis elegans Hypothetical pr... 30 0.93
AL008986-2|CAA15621.3| 649|Caenorhabditis elegans Hypothetical ... 30 0.93
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 29 1.6
AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical ... 28 2.8
U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical pr... 28 3.8
U53139-4|AAK18931.2| 369|Caenorhabditis elegans Serpentine rece... 27 5.0
Z93378-3|CAB07585.3| 749|Caenorhabditis elegans Hypothetical pr... 27 6.6
U67947-2|AAB07558.1| 204|Caenorhabditis elegans Hypothetical pr... 27 6.6
AL132876-8|CAD21660.1| 829|Caenorhabditis elegans Hypothetical ... 27 6.6
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 27 6.6
Z78539-1|CAB01727.1| 350|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical p... 27 8.7
AC006662-6|AAF39892.1| 274|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical
protein K07C5.3 protein.
Length = 493
Score = 36.3 bits (80), Expect = 0.011
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 6 EETPKRVKKECDYGDKCYRKNPAHFREYSHP 98
EE P ++ C YG+KCYRKN H + HP
Sbjct: 462 EECPPDMEA-CRYGEKCYRKNKDHLDSFWHP 491
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 34.3 bits (75), Expect = 0.043
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +3
Query: 183 AEQLDVIVEKKLYEPALKEE-ANSSKQLT-VAIQKGNSNSGTTSNLIETAKVEQINTQKT 356
A ++VEKK+ +PA+KE+ A K+ T + +S +S+ E++ + ++ +
Sbjct: 180 ARTAPIVVEKKIEKPAVKEQKARKKKEKTPTPTESSFESSSDSSSTSESSTSSESSSSAS 239
Query: 357 GHNALSKIATKVSEVNRNENKVSRNRGESS 446
+ SK ++VS + +K S ++ S
Sbjct: 240 ESESESKSESQVSSSKTSTSKASSSKAYGS 269
>Z75541-6|CAA99857.2| 644|Caenorhabditis elegans Hypothetical
protein F52B5.5a protein.
Length = 644
Score = 33.9 bits (74), Expect = 0.057
Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +3
Query: 153 EKYSLQRVMIAEQLDVIVEKKLYEPALKEEANSSKQLTVAIQKGNSN--SGTTSNLIETA 326
+KY RV E+ +++EK+ E +++ +++ ++ + S S T + +
Sbjct: 131 QKYEYLRVRTEEEQQLVIEKRARERFIRKSMKIAEETALSYENDGSRELSETMTQKVTQM 190
Query: 327 KVEQINTQKTGHNALSKIATKV-SEVNRNEN 416
+ N G++ S +A +V S++N NE+
Sbjct: 191 DFTETNVPFDGNDESSNLAVRVQSDMNLNED 221
>AF440800-1|AAL28139.1| 644|Caenorhabditis elegans transcription
factor CEP-1 protein.
Length = 644
Score = 33.9 bits (74), Expect = 0.057
Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +3
Query: 153 EKYSLQRVMIAEQLDVIVEKKLYEPALKEEANSSKQLTVAIQKGNSN--SGTTSNLIETA 326
+KY RV E+ +++EK+ E +++ +++ ++ + S S T + +
Sbjct: 131 QKYEYLRVRTEEEQQLVIEKRARERFIRKSMKIAEETALSYENDGSRELSETMTQKVTQM 190
Query: 327 KVEQINTQKTGHNALSKIATKV-SEVNRNEN 416
+ N G++ S +A +V S++N NE+
Sbjct: 191 DFTETNVPFDGNDESSNLAVRVQSDMNLNED 221
>Z93239-2|CAB07529.2| 1218|Caenorhabditis elegans Hypothetical
protein H03A11.2 protein.
Length = 1218
Score = 31.5 bits (68), Expect = 0.30
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = +3
Query: 267 VAIQKGNSNSGTTSNLIETAKVEQINTQKTGHNALSKIATKVSEVNRNENKVSRNRGE 440
+A K NSNSGT+ I+ AKV Q +K G N K+ EVN N N RN +
Sbjct: 201 IAELKDNSNSGTS---IDNAKV-QTRAEKNGTNNQQH---KLIEVNVNRNYSPRNNSQ 251
>Z69660-2|CAD57697.1| 1218|Caenorhabditis elegans Hypothetical
protein H03A11.2 protein.
Length = 1218
Score = 31.5 bits (68), Expect = 0.30
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = +3
Query: 267 VAIQKGNSNSGTTSNLIETAKVEQINTQKTGHNALSKIATKVSEVNRNENKVSRNRGE 440
+A K NSNSGT+ I+ AKV Q +K G N K+ EVN N N RN +
Sbjct: 201 IAELKDNSNSGTS---IDNAKV-QTRAEKNGTNNQQH---KLIEVNVNRNYSPRNNSQ 251
>Z75545-6|CAA99888.3| 649|Caenorhabditis elegans Hypothetical
protein H37N21.1 protein.
Length = 649
Score = 29.9 bits (64), Expect = 0.93
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +3
Query: 189 QLDVIVEKKLYEPALKEEANSSKQLTVAIQKGNSNSGTTSNLIETAKVEQINT---QKTG 359
+++V +E + L E +QLT +I KG++ T NLI + Q+++ +K
Sbjct: 525 EINVHIENEEMSIVLLLEDQMHRQLTTSINKGDNPETLTENLITHGFMCQLDSEGVEKAI 584
Query: 360 HNALSKIATKVSE-VNRNENKVSRNRGES 443
A A +++E V EN+ S S
Sbjct: 585 AVAFDIRAARIAEGVQEEENETSTRESNS 613
>AL008986-2|CAA15621.3| 649|Caenorhabditis elegans Hypothetical
protein H37N21.1 protein.
Length = 649
Score = 29.9 bits (64), Expect = 0.93
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +3
Query: 189 QLDVIVEKKLYEPALKEEANSSKQLTVAIQKGNSNSGTTSNLIETAKVEQINT---QKTG 359
+++V +E + L E +QLT +I KG++ T NLI + Q+++ +K
Sbjct: 525 EINVHIENEEMSIVLLLEDQMHRQLTTSINKGDNPETLTENLITHGFMCQLDSEGVEKAI 584
Query: 360 HNALSKIATKVSE-VNRNENKVSRNRGES 443
A A +++E V EN+ S S
Sbjct: 585 AVAFDIRAARIAEGVQEEENETSTRESNS 613
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/67 (23%), Positives = 36/67 (53%)
Frame = +3
Query: 231 LKEEANSSKQLTVAIQKGNSNSGTTSNLIETAKVEQINTQKTGHNALSKIATKVSEVNRN 410
+ E + +L++ +++ + +N I+ K +Q+N + + N LS +S++NR
Sbjct: 967 ITELVQTRDELSLELRRAHDTCHNKNNQIDELK-KQLNQKISEVNKLSSKIEALSQLNRT 1025
Query: 411 ENKVSRN 431
N+ +RN
Sbjct: 1026 YNEENRN 1032
>AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical
protein Y53G8AL.1 protein.
Length = 704
Score = 28.3 bits (60), Expect = 2.8
Identities = 30/125 (24%), Positives = 52/125 (41%)
Frame = +3
Query: 69 PAHFREYSHPHLEAILDLYDGSGAYPIPEKYSLQRVMIAEQLDVIVEKKLYEPALKEEAN 248
PA E P + + LDL + + IPE + + AE L+ +VE L++
Sbjct: 278 PAQNPEIDLPEVPS-LDLEETTENPEIPEISTPREEDSAENLENLVENSEKSEILEDLEE 336
Query: 249 SSKQLTVAIQKGNSNSGTTSNLIETAKVEQINTQKTGHNALSKIATKVSEVNRNENKVSR 428
+SK LT + + G +L E +E N + N + K+ + N ++
Sbjct: 337 NSKNLT----ENSEKPGILEDLAENPDLEASNPEFDAEN--DEEHAKIVQSTENAQNLTE 390
Query: 429 NRGES 443
N +S
Sbjct: 391 NDEKS 395
>U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical
protein F57C12.2 protein.
Length = 556
Score = 27.9 bits (59), Expect = 3.8
Identities = 30/109 (27%), Positives = 54/109 (49%)
Frame = +3
Query: 105 EAILDLYDGSGAYPIPEKYSLQRVMIAEQLDVIVEKKLYEPALKEEANSSKQLTVAIQKG 284
+A++ Y+ + +K S+ ++ A Q + +EK+ E L E+ NS K V
Sbjct: 28 KALIQKYNEANLKVENQKKSITQLHGAIQ-KLKMEKQNLETQLSEK-NSPKTPNVT---E 82
Query: 285 NSNSGTTSNLIETAKVEQINTQKTGHNALSKIATKVSEVNRNENKVSRN 431
N S + + AK + I QK N L++ T++ E +N N++S+N
Sbjct: 83 NMWSLEYESKLSDAKTK-IENQKKEINKLNEKVTQLKEEQQNSNQLSKN 130
>U53139-4|AAK18931.2| 369|Caenorhabditis elegans Serpentine
receptor, class w protein67 protein.
Length = 369
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 231 LKEEANSSKQLTVAIQKGNSNSGT 302
LK ++S ++++VA++KGN NS T
Sbjct: 251 LKVASDSKRKISVAMRKGNENSKT 274
>Z93378-3|CAB07585.3| 749|Caenorhabditis elegans Hypothetical
protein F19H8.4 protein.
Length = 749
Score = 27.1 bits (57), Expect = 6.6
Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +3
Query: 144 PIPEKYSLQRVMIAEQLDVIVEKKLYEPALKEEANSSKQLTVAIQKGNSNSGTTSNLIET 323
P +K S+++V E + + K+L P E ++ + +K +S++ NL+E
Sbjct: 131 PKLKKLSIKKV---EAMRKALPKELQFPTATEVPKIRNEVKIQARKVDSHNSEKKNLLEK 187
Query: 324 AKVEQINTQKTGHNALSKIATK--VSEVNRNENKV 422
+ + +K +SKI ++ ++ +NE +V
Sbjct: 188 KRKDLAIARKMHKLKISKILSEDHSEKMKKNERRV 222
>U67947-2|AAB07558.1| 204|Caenorhabditis elegans Hypothetical
protein H03E18.2 protein.
Length = 204
Score = 27.1 bits (57), Expect = 6.6
Identities = 19/71 (26%), Positives = 29/71 (40%)
Frame = -3
Query: 382 AIFDSALCPVFCVFICSTFAVSIRLLVVPLFEFPF*MATVNCFELFASSFKAGSYNFFST 203
AI+ + VF +++ + P MA CF LF + A +FF
Sbjct: 79 AIWPIVTVTIALVFSYFSYSTHSSTSLKPYIAHHIVMAISYCFCLFLFAMFAWKQHFFVE 138
Query: 202 MTSSCSAIMTL 170
+ S CS+ TL
Sbjct: 139 ILSFCSSFSTL 149
>AL132876-8|CAD21660.1| 829|Caenorhabditis elegans Hypothetical
protein Y105E8A.9 protein.
Length = 829
Score = 27.1 bits (57), Expect = 6.6
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 99 HLEAILDLYDGSGAYPIPEKYS--LQRVMIAEQLDVIVEKKLYEPALKEEANSSKQLTVA 272
HL+ ++ + +G Y E S +Q + EQL +LY A K+ N+ L VA
Sbjct: 440 HLDTMITVLRLAGKYVPDEVVSCMIQMISANEQLQSYAVSQLYHAAQKDAINAQPLLQVA 499
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 168 EDCISPE*GMLHYHHINLVLLPDADDCTLENG 73
ED IS + + YH +N L+ + D C L+NG
Sbjct: 39 EDAISDQ---VQYHSMNPSLVEECDLCVLDNG 67
>Z78539-1|CAB01727.1| 350|Caenorhabditis elegans Hypothetical
protein C31E10.1 protein.
Length = 350
Score = 26.6 bits (56), Expect = 8.7
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = -2
Query: 68 ILSITFISVIALLFHSFRCF 9
I +ITF+S+ +++F F+C+
Sbjct: 220 IYTITFVSIFSVIFCGFKCY 239
>Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 26.6 bits (56), Expect = 8.7
Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 159 YSLQRVMIAEQLDVIVEKKLYEPALKEEANSSKQLTVAIQKGN-SNSGTTSNLIETAKVE 335
Y + + E+ +V +P +E S ++ V N + GTTS+ + T K
Sbjct: 178 YEDEMRLFIEKTGHLVTNVFADPFDSDERKSRTEMWVEASTENLAEGGTTSDDVPTEKEL 237
Query: 336 QINTQKTGHNALSKIATKVSEVNRNENK 419
+++ + A S + T E+N +++
Sbjct: 238 ELDMENNDILAESVVGTGTGELNDEKDE 265
>Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 26.6 bits (56), Expect = 8.7
Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 159 YSLQRVMIAEQLDVIVEKKLYEPALKEEANSSKQLTVAIQKGN-SNSGTTSNLIETAKVE 335
Y + + E+ +V +P +E S ++ V N + GTTS+ + T K
Sbjct: 178 YEDEMRLFIEKTGHLVTNVFADPFDSDERKSRTEMWVEASTENLAEGGTTSDDVPTEKEL 237
Query: 336 QINTQKTGHNALSKIATKVSEVNRNENK 419
+++ + A S + T E+N +++
Sbjct: 238 ELDMENNDILAESVVGTGTGELNDEKDE 265
>AC006662-6|AAF39892.1| 274|Caenorhabditis elegans Hypothetical
protein H23L24.1 protein.
Length = 274
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 356 CFLCIYLFYLCSFYK 312
C+ C+YLF LCSF K
Sbjct: 40 CY-CVYLFQLCSFLK 53
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,905,288
Number of Sequences: 27780
Number of extensions: 197986
Number of successful extensions: 680
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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