BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_I20 (497 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_05_0279 - 23794964-23795111,23795486-23795634,23796120-237962... 81 6e-16 01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731... 79 2e-15 07_01_0849 + 6896930-6896996,6897453-6897474,6897615-6897690,689... 77 6e-15 07_01_1199 + 11391638-11391718,11393477-11393590,11393690-113938... 61 6e-10 01_05_0105 - 18155135-18155297,18155379-18155515,18155621-181557... 38 0.003 12_02_0123 - 13930138-13932471 30 0.90 06_03_0465 + 21049412-21049878,21049947-21050790,21050994-210511... 28 3.6 04_04_0962 + 29728983-29729034,29729622-29731369,29731656-297317... 27 6.3 03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384... 27 6.3 >05_05_0279 - 23794964-23795111,23795486-23795634,23796120-23796221, 23796309-23796384,23796578-23796588 Length = 161 Score = 80.6 bits (190), Expect = 6e-16 Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 1/101 (0%) Frame = +1 Query: 28 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 207 +K LC +SG KIYPG G ++ D + F F NSKC+ R P K+TWT +YR++ K Sbjct: 3 LKTELCRFSGQKIYPGKGIRFIRADSQVFLFANSKCKRYFHNRLKPAKLTWTAMYRKQHK 62 Query: 208 KG-QEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 327 K E IVGASL I KR KPEV Sbjct: 63 KDIHAEAVKKRRRTTKKPYSRSIVGASLEVIQKKRAEKPEV 103 >01_06_1123 + 34671365-34671883,34672366-34672625,34673045-34673143, 34673237-34675178,34675588-34675658,34676158-34676307, 34676963-34677038,34677131-34677232,34677707-34677855, 34678214-34678364 Length = 1172 Score = 79.0 bits (186), Expect = 2e-15 Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Frame = +1 Query: 40 LCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKG-Q 216 LC +SG KIYPG G ++ D + F F NSKC+ R P K+TWT +YR++ KK Sbjct: 1017 LCRFSGQKIYPGKGIRFIRADSQVFLFANSKCKRYFHNRLKPAKLTWTAMYRKQHKKDIH 1076 Query: 217 EEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 327 E IVGA+L I KR+ KPEV Sbjct: 1077 AEAVKKRRRTTKKPYSRSIVGATLEVIQKKRSEKPEV 1113 >07_01_0849 + 6896930-6896996,6897453-6897474,6897615-6897690, 6897775-6897876,6898156-6898304,6898637-6898784 Length = 187 Score = 77.4 bits (182), Expect = 6e-15 Identities = 41/103 (39%), Positives = 53/103 (51%), Gaps = 1/103 (0%) Frame = +1 Query: 22 VKMKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRK 201 +K+ LC +SG KIYPG G ++ D + F F NSKC+ R P K+TWT +YR++ Sbjct: 27 LKVWTELCRFSGAKIYPGKGIRFIRADSQVFLFSNSKCKRYFHNRLKPAKLTWTAMYRKQ 86 Query: 202 FKKG-QEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 327 KK E IVGA+L I KR KPEV Sbjct: 87 HKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEV 129 >07_01_1199 + 11391638-11391718,11393477-11393590,11393690-11393826, 11393905-11394064 Length = 163 Score = 60.9 bits (141), Expect = 6e-10 Identities = 26/56 (46%), Positives = 32/56 (57%) Frame = +1 Query: 28 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 195 M++ C + +YPGHG V+ D K F F SKC M+RNPRKV WT YR Sbjct: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYR 56 >01_05_0105 - 18155135-18155297,18155379-18155515,18155621-18155734, 18155768-18155806,18156838-18156993 Length = 202 Score = 38.3 bits (85), Expect = 0.003 Identities = 16/28 (57%), Positives = 17/28 (60%) Frame = +1 Query: 112 FTFLNSKCEAAHLMRRNPRKVTWTVLYR 195 F F SKC M+RNPRKV WT YR Sbjct: 67 FRFCRSKCHKNFKMKRNPRKVKWTKAYR 94 >12_02_0123 - 13930138-13932471 Length = 777 Score = 30.3 bits (65), Expect = 0.90 Identities = 22/71 (30%), Positives = 35/71 (49%) Frame = +1 Query: 10 SFRGVKMKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVL 189 +F GV+M+ C G+K+ G+T V G + ++++K RR P WTV+ Sbjct: 130 TFGGVRMEDSGCVAGGFKV----GRTTV---GHSLVYVSTKAPVK--ARRTP----WTVV 176 Query: 190 YRRKFKKGQEE 222 YR G+ E Sbjct: 177 YRTDLADGKTE 187 >06_03_0465 + 21049412-21049878,21049947-21050790,21050994-21051121, 21051232-21051247 Length = 484 Score = 28.3 bits (60), Expect = 3.6 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = -1 Query: 353 IACSLCAFLTSGFMLRLAMMSLSEAPTIARWNFCVLLVRF 234 ++C L A + SGF + M S A +A WN + V++ Sbjct: 181 LSCKLLAPVLSGFFISFVSMEAS-AAALAAWNLAAVWVQY 219 >04_04_0962 + 29728983-29729034,29729622-29731369,29731656-29731742, 29732035-29732199,29732437-29732526,29732863-29733027, 29733124-29733418,29733550-29733764,29733879-29733947, 29734107-29734184,29734466-29734529,29734658-29734897, 29734985-29735124 Length = 1135 Score = 27.5 bits (58), Expect = 6.3 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -2 Query: 262 GTFVSFLYVSWPVLLLGPF*IYVCI 188 GT + YVSWPVL++ I +CI Sbjct: 742 GTILIISYVSWPVLIIFIPSILICI 766 >03_02_0740 - 10836752-10837052,10837756-10837814,10837901-10838476, 10839965-10841686,10841776-10842173,10842264-10842318, 10842989-10843048,10843444-10843540,10844885-10844955, 10845029-10845109,10846054-10846124,10847951-10848119, 10848521-10848683,10848752-10848942,10849037-10849168 Length = 1381 Score = 27.5 bits (58), Expect = 6.3 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -1 Query: 371 CSFAALIACSLCAFLTSGFMLRL 303 CSF+ L C+ CAFL S L+L Sbjct: 108 CSFSYLTYCANCAFLVSTVSLQL 130 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,255,262 Number of Sequences: 37544 Number of extensions: 224775 Number of successful extensions: 548 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 532 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 545 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1047416480 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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