Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I19
(493 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 24 0.86
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 23 1.1
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 23 2.0
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 2.0
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 2.0
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 2.0
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 6.1
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 21 6.1
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 21 8.0
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 21 8.0
AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory recept... 21 8.0
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 23.8 bits (49), Expect = 0.86
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 256 KNFSDSLNSNRRADID 209
KNF+DS SNR +ID
Sbjct: 415 KNFNDSPESNRSNEID 430
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 23.4 bits (48), Expect = 1.1
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 377 RHLEPSLPTSTLQELGELYEQYCQ 306
RH E + ++ELG ++ YC+
Sbjct: 290 RHPESNPSERVMRELGRIFRAYCR 313
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 22.6 bits (46), Expect = 2.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 327 ALRAILPDDLQK*EGVTPLRLRPPKILVTVLTPTGERI 214
+L +I+ + K G T +R+RPPK+ TP G R+
Sbjct: 64 SLASIIDEAATKVHGTT-VRVRPPKVYP---TPYGGRL 97
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.6 bits (46), Expect = 2.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 327 ALRAILPDDLQK*EGVTPLRLRPPKILVTVLTPTGERI 214
+L +I+ + K G T +R+RPPK+ TP G R+
Sbjct: 378 SLASIIDEAATKVHGTT-VRVRPPKVYP---TPYGGRL 411
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 2.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 327 ALRAILPDDLQK*EGVTPLRLRPPKILVTVLTPTGERI 214
+L +I+ + K G T +R+RPPK+ TP G R+
Sbjct: 611 SLASIIDEAATKVHGTT-VRVRPPKVYP---TPYGGRL 644
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.6 bits (46), Expect = 2.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 327 ALRAILPDDLQK*EGVTPLRLRPPKILVTVLTPTGERI 214
+L +I+ + K G T +R+RPPK+ TP G R+
Sbjct: 611 SLASIIDEAATKVHGTT-VRVRPPKVYP---TPYGGRL 644
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.0 bits (42), Expect = 6.1
Identities = 10/46 (21%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 166 VIGSQFLETSCLYQVHMIWNLHFADLFQ-VSGYSFDDFVLFNILHC 32
++ S F+ T ++ + + + +Q ++ Y F +FN++HC
Sbjct: 493 IVRSVFVTTYLMFDYCTVLRVQRFNNYQSLAHYLRVFFTVFNVVHC 538
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 21.0 bits (42), Expect = 6.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 277 TIAFATTKNFSDSLNSNRRADIDVTQYSSTAYIKP 173
T + T + SDS S+ D ++ S+ +YIKP
Sbjct: 125 TASRETKSSESDSGASSADPDDELRSSSAFSYIKP 159
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 20.6 bits (41), Expect = 8.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 256 KNFSDSLNSNRRADIDVTQYSSTAY 182
K SDS N+N + + + QY + A+
Sbjct: 456 KEESDSNNNNNKEEGNSCQYCNIAF 480
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 20.6 bits (41), Expect = 8.0
Identities = 6/22 (27%), Positives = 15/22 (68%)
Frame = -3
Query: 365 PSLPTSTLQELGELYEQYCQMI 300
P+LP +++ G + ++ CQ++
Sbjct: 129 PTLPVTSIHLRGAIGQRSCQVV 150
>AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory receptor
candidate 22 protein.
Length = 301
Score = 20.6 bits (41), Expect = 8.0
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 150 NWLPMTLIGFMYAVL 194
NW P +IG M + L
Sbjct: 91 NWYPRLIIGIMNSTL 105
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,333
Number of Sequences: 336
Number of extensions: 2375
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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