Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I16
(490 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 211 5e-54
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 162 3e-39
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 131 4e-34
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 144 9e-34
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 132 5e-30
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 130 1e-29
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 126 3e-28
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 122 6e-27
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 117 1e-25
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 115 5e-25
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 113 2e-24
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 106 2e-22
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 103 3e-21
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 101 1e-20
UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1; Encepha... 73 3e-12
UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 68 1e-10
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 65 7e-10
UniRef50_A3DMS7 Cluster: 30S ribosomal protein S24e; n=1; Staphy... 60 3e-08
UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1; Thermo... 58 1e-07
UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=... 55 1e-06
UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1; Methan... 54 2e-06
UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1; Archae... 53 3e-06
UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2; Desulf... 52 5e-06
UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1; Caldiv... 52 9e-06
UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1; Nanoar... 50 2e-05
UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3; Methan... 50 3e-05
UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5; Euryar... 46 3e-04
UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3; Sulfol... 46 5e-04
UniRef50_Q6L0P8 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 45 0.001
UniRef50_P19953 Cluster: 30S ribosomal protein S24e; n=6; Haloba... 44 0.002
UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1; ... 42 0.006
UniRef50_A7I4V3 Cluster: SSU ribosomal protein S24E; n=1; Candid... 40 0.022
UniRef50_P54032 Cluster: 30S ribosomal protein S24e; n=1; Methan... 40 0.022
UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.030
UniRef50_Q2FS46 Cluster: 30S ribosomal protein S24e; n=1; Methan... 38 0.091
UniRef50_A2SR72 Cluster: Ribosomal protein S24e; n=2; Methanomic... 38 0.091
UniRef50_A1RWA8 Cluster: Putative uncharacterized protein; n=1; ... 34 2.0
UniRef50_A7CXX0 Cluster: Binding-protein-dependent transport sys... 33 2.6
UniRef50_Q08FF6 Cluster: Putative uncharacterized protein; n=2; ... 33 3.4
UniRef50_Q9VT48 Cluster: CG8177-PA, isoform A; n=13; Diptera|Rep... 33 3.4
UniRef50_Q5CJF6 Cluster: Delta-COP; n=2; Cryptosporidium|Rep: De... 33 3.4
UniRef50_Q895J6 Cluster: MgpA protein; n=7; Clostridium|Rep: Mgp... 33 4.5
UniRef50_A4AT05 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q5KEJ5 Cluster: Alfa-L-rhamnosidase, putative; n=2; Fil... 33 4.5
UniRef50_Q5AX29 Cluster: Putative uncharacterized protein; n=5; ... 33 4.5
UniRef50_Q8PYD4 Cluster: Glutathione-regulated potassium-efflux ... 33 4.5
UniRef50_Q4JAR5 Cluster: Membrane protein; n=1; Sulfolobus acido... 33 4.5
UniRef50_Q14QN3 Cluster: Hypothetical abc transporter permease c... 32 6.0
UniRef50_A4LBQ0 Cluster: ABC transporter, permease protein; n=9;... 32 6.0
UniRef50_Q3DYC9 Cluster: Alpha-L-rhamnosidase; n=6; Bacteria|Rep... 32 7.9
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 211 bits (516), Expect = 5e-54
Identities = 98/115 (85%), Positives = 106/115 (92%)
Frame = +2
Query: 74 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 253
TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FG
Sbjct: 6 TIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFG 65
Query: 254 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 418
GGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 66 GGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 162 bits (394), Expect = 3e-39
Identities = 77/115 (66%), Positives = 94/115 (81%), Gaps = 1/115 (0%)
Frame = +2
Query: 74 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVFGFKTNF 250
TIRTR FMTNRLLARKQ V DVLHPG+ VSK E++EKLA+MY+V P+ +F F F+T+F
Sbjct: 7 TIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCFKFRTHF 66
Query: 251 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 415
GGGKS+G+ LIYDT++ AKKFEPK+RL R+GL K +RKQ KERKNR KK+RG
Sbjct: 67 GGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIRG 121
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 131 bits (316), Expect(2) = 4e-34
Identities = 60/89 (67%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = +2
Query: 74 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 250
T+RTRKFMTNRLL+RKQ V +VLHPG+ VSK +++EKLAK+Y+V + +FVF F+T+F
Sbjct: 11 TLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHF 70
Query: 251 GGGKSTGFALIYDTLDLAKKFEPKHRLAR 337
GGGKSTGF LIYD LD AKK+EPK+RL R
Sbjct: 71 GGGKSTGFGLIYDNLDAAKKYEPKYRLIR 99
Score = 35.9 bits (79), Expect(2) = 4e-34
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 338 HGLYEKKRPTRKQRKERKNRMKKVRG 415
+GL K +RKQ KERKNR KK+RG
Sbjct: 128 NGLATKVEKSRKQMKERKNRAKKIRG 153
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 144 bits (349), Expect = 9e-34
Identities = 66/112 (58%), Positives = 87/112 (77%)
Frame = +2
Query: 62 GNXXTIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFK 241
G+ IRTRKFM+NRLL R+QMV D+LHPG+ +S +IRE+LAK YK +PD+VF FGF+
Sbjct: 2 GDNVLIRTRKFMSNRLLFRRQMVVDILHPGRCVLSLKDIRERLAKTYKTSPDMVFAFGFR 61
Query: 242 TNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 397
T+FGGGKSTGFAL+YD+LD AKKFEP++RL R + P R++ +ER +
Sbjct: 62 THFGGGKSTGFALVYDSLDHAKKFEPRYRLIRVKWVAGRHPQRQKVEERTQK 113
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 132 bits (318), Expect = 5e-30
Identities = 63/117 (53%), Positives = 85/117 (72%), Gaps = 2/117 (1%)
Frame = +2
Query: 74 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 250
TIR +K+M+N LL RKQ ++LHP K +V+K E++E+LAKMYK+ + + +FGFKT F
Sbjct: 6 TIRVKKYMSNPLLRRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFKTLF 65
Query: 251 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK-RPTRKQRKERKNRMKKVRGT 418
GGG++ GF LIY +D KKFE K+RL R GL +K+ + R+ KE KNR KKVRGT
Sbjct: 66 GGGRTKGFGLIYKNVDAVKKFEKKYRLVREGLIDKETKAGRRASKELKNRRKKVRGT 122
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 130 bits (315), Expect = 1e-29
Identities = 65/120 (54%), Positives = 85/120 (70%), Gaps = 2/120 (1%)
Frame = +2
Query: 65 NXXTIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFK 241
N T+R R+F+ N LLARKQ V DV+HP VSK++++ KLAK+YKV + + +FGFK
Sbjct: 30 NNFTVRVRQFLNNPLLARKQFVVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFK 89
Query: 242 TNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPT-RKQRKERKNRMKKVRGT 418
T FGGG+S+GF +IY+ + KKFE ++R R G+ EK T RK RKE KNR KKVRGT
Sbjct: 90 TAFGGGRSSGFCVIYNNISALKKFEHRYRQVRMGIAEKVTATGRKGRKETKNRRKKVRGT 149
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 126 bits (303), Expect = 3e-28
Identities = 69/127 (54%), Positives = 85/127 (66%), Gaps = 20/127 (15%)
Frame = +2
Query: 95 MTNRLLARKQMV-----------CDVLHPGKPTVSK--------TEIREKLAKMYKVTPD 217
MTNRLL R+Q V CDVLHPG+ VSK E++EK+AKMY V+ +
Sbjct: 1 MTNRLLQRRQFVRLTNVFHQSQICDVLHPGRANVSKVRYIRGAGAELQEKIAKMYNVSDE 60
Query: 218 -VVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKN 394
V +FGF+T FGGGKSTGF LIYD +D KKFEPKHRL R GL + + +RK KE+KN
Sbjct: 61 KCVSIFGFRTAFGGGKSTGFGLIYDNIDAFKKFEPKHRLIRAGLKDAVQKSRKNIKEKKN 120
Query: 395 RMKKVRG 415
R+KK+RG
Sbjct: 121 RVKKLRG 127
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 122 bits (293), Expect = 6e-27
Identities = 61/111 (54%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
Frame = +2
Query: 74 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 250
TIRTR + N LL RKQ+V D+ HPG TEI+EKLAKMYKV + + GF T +
Sbjct: 9 TIRTRNLIVNPLLCRKQVVVDIYHPGIVQPKFTEIKEKLAKMYKVKDVQTIVLNGFVTKY 68
Query: 251 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMK 403
GGGK++GFALIYDTL KKF PKH+L R GL +K + RK RKE K + +
Sbjct: 69 GGGKTSGFALIYDTLSALKKFVPKHQLIRAGLDKKTKAPRKARKEHKKKWR 119
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 117 bits (282), Expect = 1e-25
Identities = 56/113 (49%), Positives = 75/113 (66%)
Frame = +2
Query: 77 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 256
IRT+K + N LL+R+Q+ DVLHP PT SK +IRE+LAK KV V V+GF T +GG
Sbjct: 5 IRTKKILVNPLLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQYGG 64
Query: 257 GKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 415
GKSTGFAL+YD K+EP +RL + + +K TR+ KE K ++K+ G
Sbjct: 65 GKSTGFALVYDNQQYLLKYEPNYRLRKVKILGEKPNTRRSFKELKRKIKRTSG 117
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 115 bits (277), Expect = 5e-25
Identities = 63/116 (54%), Positives = 77/116 (66%), Gaps = 3/116 (2%)
Frame = +2
Query: 77 IRTRKFMTNRLLARKQMVCDVLHPGK-PTVSKTEIREKLAKMYKVTPDV--VFVFGFKTN 247
IRT +F N+LL RKQ + +V HP TV IR+KLA +YKV PD V +FGFKT
Sbjct: 12 IRTSQFKVNKLLNRKQFIVEVNHPHWCGTVPTQLIRKKLATLYKV-PDASQVSLFGFKTK 70
Query: 248 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 415
FGGGK+TGF LIYD L K+FEP +R R G + + P RK KER+NR KK+RG
Sbjct: 71 FGGGKTTGFGLIYDDLASLKRFEPNYRKTRMGFGKARLPARKSVKERRNRNKKLRG 126
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 113 bits (272), Expect = 2e-24
Identities = 51/115 (44%), Positives = 75/115 (65%)
Frame = +2
Query: 74 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 253
++ RK++ N+LL RKQ V D+ H G ++ EI++++A K D+V +FG +T FG
Sbjct: 5 SVHIRKYIVNKLLDRKQFVIDMQHLGAKAPTRDEIKDEVASRLKANKDLVVIFGLETKFG 64
Query: 254 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 418
GG +TGF +YD+LD KK EPKHRL + GL EK + TR+ RK + + KV G+
Sbjct: 65 GGHTTGFGFVYDSLDALKKTEPKHRLIKAGLAEKGKVTRRMRKNARRQKVKVWGS 119
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 106 bits (255), Expect = 2e-22
Identities = 52/114 (45%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = +2
Query: 77 IRTRKFMTNRLLA-RKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 253
++TRK + + L R+Q+ ++LHP KPT S+ + ++LA YK V V+G +T FG
Sbjct: 37 VKTRKVLLKQSLEIRRQLSVELLHPNKPTPSQESVVKELASKYKADERNVVVYGLRTTFG 96
Query: 254 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 415
G ++TGFALIYDT KFEPK RL R G+ K+ +RK KE K+++KK RG
Sbjct: 97 GNRTTGFALIYDTQQYLLKFEPKFRLRRRGIIPKRDGSRKGWKEVKSKLKKTRG 150
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 103 bits (246), Expect = 3e-21
Identities = 57/129 (44%), Positives = 78/129 (60%)
Frame = -1
Query: 451 LLGGRTYFRFLGTSYLLHSVLTFLTLFACRPLLFIQAVTSESVFWLKLLC*V*RVVD*SK 272
LL T+ F T Y LHSVL F TL + L I+ + +SVF L L C V RVVD +K
Sbjct: 5 LLFTSTHICFGCTPYFLHSVLAFFTLLSGSLFLLIKPMLGKSVFRLILFCIVKRVVDHAK 64
Query: 271 SGRFATTEVRLETEHENYVWRHFVHFSELFTDLSFADGRFSWMQDIAYHLLARQQSVGHK 92
+ FAT++V +T+H+N +W VH +LF+D S D F+WM+ I HLLA Q+SV HK
Sbjct: 65 ACSFATSKVSPKTKHKNNIWGCLVHLCQLFSDFSLGDSSFAWMKYINDHLLALQKSVCHK 124
Query: 91 FTRTNRRXV 65
+ ++ V
Sbjct: 125 LSCSDSHCV 133
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 101 bits (241), Expect = 1e-20
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Frame = +2
Query: 77 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVFGFKTNFG 253
++T+KF N LL RKQ + + K +SK +R +L+K Y++ P ++F+FG K NFG
Sbjct: 10 LKTKKFKNNPLLKRKQFLLSIDRKKKFNISKEWLRIELSKYYRIKDPSLIFIFGLKNNFG 69
Query: 254 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 415
G K + F IY L+ A+ EPKHRL ++ L + + + KQRKE+KN+MKK G
Sbjct: 70 GFKCSAFVYIYYNLEAARVNEPKHRLIKNNLMKLELQSSKQRKEKKNKMKKYFG 123
>UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S24
- Encephalitozoon cuniculi
Length = 126
Score = 73.3 bits (172), Expect = 3e-12
Identities = 38/106 (35%), Positives = 60/106 (56%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
NRLL+RK++ HPG P SK EIREK++++Y+ D V V K +G ++T A
Sbjct: 8 NRLLSRKELDVVAYHPGMPIPSKEEIREKISELYQTKKDNVVVMDLKNRYGTHRTTLKAK 67
Query: 281 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 418
IY ++++ E KH +A+ E R+ RK+ + + K+ GT
Sbjct: 68 IYSSIEVLSNIEKKHIVAKLTGKEFHVTPRRVRKDERKKRYKIFGT 113
>UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4;
Thermococcaceae|Rep: 30S ribosomal protein S24e -
Pyrococcus abyssi
Length = 99
Score = 67.7 bits (158), Expect = 1e-10
Identities = 31/94 (32%), Positives = 53/94 (56%)
Frame = +2
Query: 77 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 256
I+ + N+L+ RK++ ++ HPG+PT S+ +++ KL M + P+ + ++ FG
Sbjct: 3 IKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGS 62
Query: 257 GKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK 358
KS G+A Y D EP++ L R G+ EKK
Sbjct: 63 YKSKGYAKYYYDKDRMLYIEPEYILIRDGIIEKK 96
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 65.3 bits (152), Expect = 7e-10
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
N+LLAR++++ + +H T ++ +RE +AK + VFV KT FG G+S
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISNVFVRRIKTEFGRGRSLAEVH 73
Query: 281 IYDTLDLAKKFEPKHRLARH------GLYEKKRPTRKQRKERKNRMKK 406
+Y+ +A+ EP + LAR+ L E+ + R +R+E+K R KK
Sbjct: 74 VYNDSKIARVIEPLYILARNLGEEGKKLLEEAKKRRNERREKKKRKKK 121
>UniRef50_A3DMS7 Cluster: 30S ribosomal protein S24e; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S24e - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 118
Score = 59.7 bits (138), Expect = 3e-08
Identities = 32/96 (33%), Positives = 53/96 (55%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
N L+ R+++V + H GK T S+ IR + AK+Y V + V+V T +G G S
Sbjct: 20 NPLVKRREVVIRIAHIGKSTPSRGLIRHETAKIYGVEVEKVYVREINTEYGLGVSNATIH 79
Query: 281 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKER 388
IYD+++ AK+FEP + + R+ + + KE+
Sbjct: 80 IYDSVERAKQFEPPYVIKRNEYASQSYQLEQMMKEQ 115
>UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein
S24e - Thermofilum pendens (strain Hrk 5)
Length = 106
Score = 58.0 bits (134), Expect = 1e-07
Identities = 29/101 (28%), Positives = 53/101 (52%)
Frame = +2
Query: 74 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 253
++R + N+L+ R++++ ++ H G T S+ ++ E L M + V T +G
Sbjct: 5 SLRIIQEKVNKLVGRRELLVEIHHQGSGTPSRRDVAEALRNMLGTGGSAIVVRKLVTRYG 64
Query: 254 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQ 376
G S IYD+ K FEPKH L R+GL +++ +++
Sbjct: 65 QGVSEALIHIYDSDVKMKMFEPKHILRRNGLIQEQEAKKQE 105
>UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S24E-like protein - Metallosphaera sedula DSM 5348
Length = 113
Score = 54.8 bits (126), Expect = 1e-06
Identities = 25/79 (31%), Positives = 41/79 (51%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
N+++ RK++ V H G PT S+ +IR+ ++ D+V + T +G G S
Sbjct: 23 NKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKEDLVVIRKINTGYGAGISEATIH 82
Query: 281 IYDTLDLAKKFEPKHRLAR 337
+Y D+ KFEP H + R
Sbjct: 83 VYSEKDVLSKFEPAHLVNR 101
>UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S24e -
Methanopyrus kandleri
Length = 116
Score = 54.0 bits (124), Expect = 2e-06
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
N LL RK++ V H T K+E+ KLA + V +VV + ++ FG ++ G+A
Sbjct: 11 NPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEFGKRETKGYAK 70
Query: 281 IYDTLDLAKKFEPKHRLARH 340
IY +++ + EP+H + RH
Sbjct: 71 IYKSMEHLEDIEPEHMVERH 90
>UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S24e -
Archaeoglobus fulgidus
Length = 110
Score = 53.2 bits (122), Expect = 3e-06
Identities = 29/85 (34%), Positives = 49/85 (57%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
N LL R+++ C + GK T S+ E+R K+A + P+ V V KT FG ++ +
Sbjct: 14 NPLLRRREVYCRLSFEGK-TPSRKEVRGKIAGLMNAEPERVVVDYIKTEFGKTEAKCYVK 72
Query: 281 IYDTLDLAKKFEPKHRLARHGLYEK 355
IYDT++ +K E +H + R+ + E+
Sbjct: 73 IYDTVEDLQKIEEEHIIERNKVEEQ 97
>UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S24e -
Aeropyrum pernix
Length = 118
Score = 52.4 bits (120), Expect = 5e-06
Identities = 27/81 (33%), Positives = 47/81 (58%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
N L+ R+++V + H KPT + +R+KLA++ V +++ KT +G G S
Sbjct: 28 NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGVDIKRIYIRYIKTGYGAGLSKVRVH 87
Query: 281 IYDTLDLAKKFEPKHRLARHG 343
+YD+ + A FEPK+ + R+G
Sbjct: 88 VYDSPERALSFEPKYIIERNG 108
>UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1;
Caldivirga maquilingensis IC-167|Rep: 30S ribosomal
protein S24e - Caldivirga maquilingensis IC-167
Length = 155
Score = 51.6 bits (118), Expect = 9e-06
Identities = 31/102 (30%), Positives = 51/102 (50%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
N LL RK++ V H G PT + ++RE+LAK P++ +V T +G G S
Sbjct: 48 NPLLQRKEVKAIVYHVGLPTPQRLQLREELAKALGSNPELTYVTHVYTQYGVGVSRIEVH 107
Query: 281 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 406
+Y + A+ EP + R+ ++ + R + K R+ KK
Sbjct: 108 VYFDKNTAELVEPLYVRLRNMPKDQAKKIRDELKSRRKSEKK 149
>UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S24e -
Nanoarchaeum equitans
Length = 94
Score = 50.4 bits (115), Expect = 2e-05
Identities = 26/82 (31%), Positives = 45/82 (54%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
N+L R + + V HP + T ++ E +EK+A+M V + + + + +G S +A
Sbjct: 12 NKLFDRTEYIIQVEHPKEKTPTREEAKEKIAEMLNVDKNKLVIKKIVSKYGLPYSFIYAR 71
Query: 281 IYDTLDLAKKFEPKHRLARHGL 346
+YD +D AK+ E K L R+ L
Sbjct: 72 VYDNIDTAKRVELKQILRRNNL 93
>UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S24e -
Methanobacterium thermoautotrophicum
Length = 100
Score = 50.0 bits (114), Expect = 3e-05
Identities = 24/80 (30%), Positives = 44/80 (55%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
N LL RK++ + L+ G+ T E++ KL M D++ V FG ++TG+A
Sbjct: 11 NPLLNRKEIRFECLYEGESTPKVLEVKNKLVAMLDADKDLLVVDKIDQGFGEPRATGYAK 70
Query: 281 IYDTLDLAKKFEPKHRLARH 340
IY++ + + EP+H + ++
Sbjct: 71 IYESAEKLTEIEPEHVIKKN 90
>UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 101
Score = 46.4 bits (105), Expect = 3e-04
Identities = 27/90 (30%), Positives = 49/90 (54%)
Frame = +2
Query: 77 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 256
I+ K N LL R+++ V + G T S+ ++R KLA M +++ + KT +G
Sbjct: 3 IKIIKDKKNPLLNRRELDFIVKYEGS-TPSRNDVRNKLAAMLNAPLELLVIQRIKTEYGM 61
Query: 257 GKSTGFALIYDTLDLAKKFEPKHRLARHGL 346
+S G+A +Y+ D K+ E ++ L R+ +
Sbjct: 62 QESKGYAKLYEDADRMKQVEQEYVLKRNAV 91
>UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3;
Sulfolobus|Rep: 30S ribosomal protein S24e - Sulfolobus
tokodaii
Length = 120
Score = 46.0 bits (104), Expect = 5e-04
Identities = 24/95 (25%), Positives = 49/95 (51%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
N ++ R+++ V H G T+S+ ++ + +A Y D+V + T +G G S A
Sbjct: 25 NNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIKKIHTLYGAGISYVRAN 84
Query: 281 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKE 385
IY+ ++FEP++ + R + K+ + +K+
Sbjct: 85 IYNDKKTLQEFEPQYLIGRDTGQKVKKGGKGAQKQ 119
>UniRef50_Q6L0P8 Cluster: 30S ribosomal protein S24e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S24e -
Picrophilus torridus
Length = 102
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/86 (31%), Positives = 44/86 (51%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
N+LL RK++ + T S+ +IR+ LA Y ++ V + G + G+A
Sbjct: 14 NKLLFRKEINYTIKFENDKTPSREDIRKLLANNYGSDESLIIVDKNRQETGKHEIKGYAK 73
Query: 281 IYDTLDLAKKFEPKHRLARHGLYEKK 358
IYDT + A +EP + L R+ L K+
Sbjct: 74 IYDTKEHAMLYEPDYELFRNKLKVKE 99
>UniRef50_P19953 Cluster: 30S ribosomal protein S24e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 102
Score = 43.6 bits (98), Expect = 0.002
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
N +L R + +V+H + T S+ +R+ LA + V + T FG K+ G+A
Sbjct: 11 NPMLHRTDVRFEVVHD-EATPSRLSVRDSLAATLNKDAEEVVIHKLDTKFGMRKTVGYAK 69
Query: 281 IYDTLDLAKKFEPKHRLARH 340
+YD + A+ E H L R+
Sbjct: 70 VYDNPEYARDVEQDHMLERN 89
>UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
T26G10.3 - Caenorhabditis elegans
Length = 91
Score = 42.3 bits (95), Expect = 0.006
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 125 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 223
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>UniRef50_A7I4V3 Cluster: SSU ribosomal protein S24E; n=1;
Candidatus Methanoregula boonei 6A8|Rep: SSU ribosomal
protein S24E - Methanoregula boonei (strain 6A8)
Length = 99
Score = 40.3 bits (90), Expect = 0.022
Identities = 26/79 (32%), Positives = 40/79 (50%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
N LL+R+++ + + G T S+ +I KL + +V + K+NFG G A
Sbjct: 11 NELLSRREIAFTLTYDGA-TPSRLQIIGKLCALLNTKDPLVVLDSLKSNFGKMVIVGKAR 69
Query: 281 IYDTLDLAKKFEPKHRLAR 337
IYD+ D KK E + AR
Sbjct: 70 IYDSEDAKKKTEHPYLSAR 88
>UniRef50_P54032 Cluster: 30S ribosomal protein S24e; n=1;
Methanocaldococcus jannaschii|Rep: 30S ribosomal protein
S24e - Methanococcus jannaschii
Length = 101
Score = 40.3 bits (90), Expect = 0.022
Identities = 25/85 (29%), Positives = 44/85 (51%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
N LL RK+ V H G PT + +++ KLA + D++ V G ++ G+A
Sbjct: 11 NPLLKRKEYRFIVDHDG-PTPTFKDVKLKLAAILNANKDLLIVEKIVEEAGMQRARGYAK 69
Query: 281 IYDTLDLAKKFEPKHRLARHGLYEK 355
+YD ++ K E +H L ++ + E+
Sbjct: 70 LYDNEEMLKLVEREHILRKNKIEEE 94
>UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 204
Score = 39.9 bits (89), Expect = 0.030
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 269 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 397
GF L+YDT D A K++P+H + H R + +RKE++ R
Sbjct: 54 GFTLVYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>UniRef50_Q2FS46 Cluster: 30S ribosomal protein S24e; n=1;
Methanospirillum hungatei JF-1|Rep: 30S ribosomal
protein S24e - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 112
Score = 38.3 bits (85), Expect = 0.091
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
N LL RK++ + G T S+ + KLA M D + + FG + TG A
Sbjct: 11 NVLLNRKEIGFSITFTGA-TPSRKMVHAKLAAMLSAPKDQLVIGSLHNRFGLTEITGDAR 69
Query: 281 IYDTLDLAKKFEPKH 325
+Y + + KK EP++
Sbjct: 70 VYTSAEYLKKIEPEY 84
>UniRef50_A2SR72 Cluster: Ribosomal protein S24e; n=2;
Methanomicrobiales|Rep: Ribosomal protein S24e -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 97
Score = 38.3 bits (85), Expect = 0.091
Identities = 24/79 (30%), Positives = 39/79 (49%)
Frame = +2
Query: 101 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 280
N LL+R ++ + G T ++++I K+A M + + + K FG TG A
Sbjct: 11 NELLSRNELAFTASYDGA-TPARSDIGAKIAAMQNTPVENLILSPLKGRFGTRAVTGVAR 69
Query: 281 IYDTLDLAKKFEPKHRLAR 337
IYDT + K E + +AR
Sbjct: 70 IYDTPEALKATEREFLIAR 88
>UniRef50_A1RWA8 Cluster: Putative uncharacterized protein; n=1;
Thermofilum pendens Hrk 5|Rep: Putative uncharacterized
protein - Thermofilum pendens (strain Hrk 5)
Length = 277
Score = 33.9 bits (74), Expect = 2.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 214 WRHFVHFSELFTDLSFADGRFSWMQDIA 131
WR + FSELFT +S D + W +IA
Sbjct: 83 WRFYAFFSELFTKISIIDSLYEWSINIA 110
>UniRef50_A7CXX0 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Opitutaceae
bacterium TAV2|Rep: Binding-protein-dependent transport
systems inner membrane component - Opitutaceae bacterium
TAV2
Length = 365
Score = 33.5 bits (73), Expect = 2.6
Identities = 28/79 (35%), Positives = 34/79 (43%)
Frame = -2
Query: 255 PPKFVLKPNTKTTSGVTLYILASFSRISVLLTVGFPGCKTSHTICLRANNLLVINLRVRI 76
P VL P T T+G L LASF ++VL + G + SH R L RI
Sbjct: 220 PLAMVLFP-TSFTAGAFLVALASFFPMTVLTSSGIASVRQSHLDVARMLGATQRQLIWRI 278
Query: 75 VXLFPLPTSFXD*FSEISA 19
LPT F F +SA
Sbjct: 279 AIPSALPTIFVGLFMGLSA 297
>UniRef50_Q08FF6 Cluster: Putative uncharacterized protein; n=2;
Mule deer poxvirus|Rep: Putative uncharacterized protein
- Deerpox virus W-1170-84
Length = 129
Score = 33.1 bits (72), Expect = 3.4
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +2
Query: 152 KPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRL 331
KPT+ + ++ EKL K YK + F+ F T F +I D K+F K+
Sbjct: 37 KPTMDRIDLAEKLIKKYKDIRSLYFLLNI---FREMPDTEF-VIKQLSDYIKRFNRKYLE 92
Query: 332 ARHGLYEKKRPTRKQRKERKN 394
+ K +PT K++ +N
Sbjct: 93 QNDTTFGKTQPTIKRKHRFRN 113
>UniRef50_Q9VT48 Cluster: CG8177-PA, isoform A; n=13; Diptera|Rep:
CG8177-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 1268
Score = 33.1 bits (72), Expect = 3.4
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 248 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 406
FGG K +L YD + E K R +RH Y +++ + + E KN++++
Sbjct: 133 FGGKKKIPPSLSYDEQPTDQSHERKRRRSRHQYYRQRKFSHQDSVEPKNKLEE 185
>UniRef50_Q5CJF6 Cluster: Delta-COP; n=2; Cryptosporidium|Rep:
Delta-COP - Cryptosporidium hominis
Length = 535
Score = 33.1 bits (72), Expect = 3.4
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +2
Query: 215 DVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKN 394
DV+F F +FG +S + I L++ + E H+L R K+ +++R+ N
Sbjct: 113 DVIFAFDEIVSFGYRESINLSQIKTCLEMESQEEKLHKLIRQ---NKENEEKERRRHIAN 169
Query: 395 RMKKVRGT 418
R+ K R T
Sbjct: 170 RLDKERVT 177
>UniRef50_Q895J6 Cluster: MgpA protein; n=7; Clostridium|Rep: MgpA
protein - Clostridium tetani
Length = 324
Score = 32.7 bits (71), Expect = 4.5
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -1
Query: 268 GRFATTEVRLETEHENYVWRHFVHF--SELFTDLSFADGRFSWMQDIAYHLL 119
G FA ++ E++ Y++ + H +EL+ D +F D + M +I Y +L
Sbjct: 90 GNFARVNANIDIENKKYIFINIDHHISNELYGDYNFVDPNAACMGEIVYQML 141
>UniRef50_A4AT05 Cluster: Putative uncharacterized protein; n=1;
Flavobacteriales bacterium HTCC2170|Rep: Putative
uncharacterized protein - Flavobacteriales bacterium
HTCC2170
Length = 374
Score = 32.7 bits (71), Expect = 4.5
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -1
Query: 484 FYLLTILTVTSLLGGRTYFRFLGTSYLLHSVLTFLTLFACRPLLFIQAVTSESVFWLKLL 305
F LL IL T LGG Y ++ ++Y L L F+ L C P + ++ +F+L L+
Sbjct: 59 FLLLGILYFT--LGGVNYVKYDPSNYFLKEFLRFMILVVCAPEV-LKRTKHRDIFYLALV 115
>UniRef50_Q5KEJ5 Cluster: Alfa-L-rhamnosidase, putative; n=2;
Filobasidiella neoformans|Rep: Alfa-L-rhamnosidase,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 858
Score = 32.7 bits (71), Expect = 4.5
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -1
Query: 283 D*SKSGRFATTEVRLETEHENYVWRHFVHFSELFTDLSFADGRFSWMQDI 134
D ++G F ++ + HEN VW +F + TD D R W DI
Sbjct: 405 DMRRTGTFTSSHDMVNRLHENVVWGMMSNFVSVPTDCPQRDERLGWTGDI 454
>UniRef50_Q5AX29 Cluster: Putative uncharacterized protein; n=5;
Pezizomycotina|Rep: Putative uncharacterized protein -
Emericella nidulans (Aspergillus nidulans)
Length = 905
Score = 32.7 bits (71), Expect = 4.5
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = -1
Query: 283 D*SKSGRFATTEVRLETEHENYVWRHFVHFSELFTDLSFADGRFSWMQDIAYHLLAR 113
D ++G F+ + L HEN +W +F + TD D R W DI H AR
Sbjct: 423 DMEQTGFFSCSNPLLNKLHENIIWSMRGNFLSIPTDCPQRDERLGWTGDI--HAFAR 477
>UniRef50_Q8PYD4 Cluster: Glutathione-regulated potassium-efflux
system protein; n=3; Methanosarcina|Rep:
Glutathione-regulated potassium-efflux system protein -
Methanosarcina mazei (Methanosarcina frisia)
Length = 695
Score = 32.7 bits (71), Expect = 4.5
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 454 SLLGGRTYFRFLGTSYLLHSVLTFLTLFACRPLLFIQAVTSESVFWLKLL 305
SLL TY FL S + V FL + RP F S+SV+ +KL+
Sbjct: 348 SLLSKETYQAFLAVSIITMGVTPFLINASYRPAEFFVKKASDSVYGMKLV 397
>UniRef50_Q4JAR5 Cluster: Membrane protein; n=1; Sulfolobus
acidocaldarius|Rep: Membrane protein - Sulfolobus
acidocaldarius
Length = 247
Score = 32.7 bits (71), Expect = 4.5
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = -1
Query: 490 LDFYLLTILTVTSLLGGRTYFRFLGTSYLLHSVLTFLTLFACRPLLFIQAVTSESVFWLK 311
L+F TI V L + + F+GT + ++++TF+ + L FI +TSE V +
Sbjct: 56 LEFSNSTIYVVHLLSNRKIIYYFMGTDVIFYAIITFVNVLTVAGLSFI--LTSEGVNVIG 113
Query: 310 LL 305
LL
Sbjct: 114 LL 115
>UniRef50_Q14QN3 Cluster: Hypothetical abc transporter permease
component transmembrane protein; n=1; Spiroplasma
citri|Rep: Hypothetical abc transporter permease
component transmembrane protein - Spiroplasma citri
Length = 1415
Score = 32.3 bits (70), Expect = 6.0
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 110 LARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYD 289
L + +V D L+ GK +KT+I K A +Y + + +F F G G S YD
Sbjct: 783 LTKNSLVSDYLYNGKWLSTKTDISAKNAHLYAQQLNNMIIFNFMV--GKGASLSIGTFYD 840
>UniRef50_A4LBQ0 Cluster: ABC transporter, permease protein; n=9;
Proteobacteria|Rep: ABC transporter, permease protein -
Burkholderia pseudomallei 305
Length = 294
Score = 32.3 bits (70), Expect = 6.0
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 475 LTILTVTSLLGGRTYFRFLGTSYLLHSVLTFLTLFACRPLLFIQAVTSESV 323
L + T LLG TY R G ++L+ +V+T T+ P ++ A+ V
Sbjct: 56 LGLQNYTQLLGSTTYLRVFGNTFLVATVVTVATVAIGFPTAWLLAIAPRKV 106
>UniRef50_Q3DYC9 Cluster: Alpha-L-rhamnosidase; n=6; Bacteria|Rep:
Alpha-L-rhamnosidase - Chloroflexus aurantiacus J-10-fl
Length = 952
Score = 31.9 bits (69), Expect = 7.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -1
Query: 283 D*SKSGRFATTEVRLETEHENYVWRHFVHFSELFTDLSFADGRFSWMQDI 134
D + G F ++ L HEN VW +F ++ TD D R W DI
Sbjct: 434 DMERIGWFTCSDQLLNRFHENVVWSMRGNFLDVPTDCPQRDERLGWTGDI 483
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,357,532
Number of Sequences: 1657284
Number of extensions: 8790121
Number of successful extensions: 26877
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 25570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26747
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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