Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I16
         (490 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   4.0  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   9.3  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   9.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   9.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   9.3  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   9.3  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 239 KTNFGGGKSTGFALIYDTLDLA 304
           KTN  G  S+G  L+ +  D+A
Sbjct: 724 KTNLSGDSSSGTTLLLELDDIA 745


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 137 VLHPGKPTVSKTEIREK 187
           +LHP + T  K   REK
Sbjct: 15  LLHPSRCTQGKVNYREK 31


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 137 VLHPGKPTVSKTEIREK 187
           +LHP + T  K   REK
Sbjct: 15  LLHPSRCTQGKVNYREK 31


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 436 TYFRFLGTSYLLHSV 392
           TY  +LG +YL++++
Sbjct: 656 TYICYLGKAYLMYAI 670


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +1

Query: 208 DARRSFRVRFQDELRWWQIDRICF 279
           + +R+  +    + + W IDR CF
Sbjct: 173 NCKRTATITAATDCQLWAIDRQCF 196


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 134 RIPSACAPTICWS 96
           R+P+ C  T  WS
Sbjct: 195 RVPATCCTTXWWS 207


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,771
Number of Sequences: 438
Number of extensions: 2525
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)