Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I15
         (460 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   4.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   4.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.5  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   7.3  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    20   9.6  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    20   9.6  

>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 96 WLQGRSILRHTAFLCFEGCDD 34
          WL   S   H A L  EGC++
Sbjct: 37 WLAAASGAPHPAALPIEGCNE 57


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
          ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 96 WLQGRSILRHTAFLCFEGCDD 34
          WL   S   H A L  EGC++
Sbjct: 37 WLAAASGAPHPAALPIEGCNE 57


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 38  SHPSKHKNAVCRKIDRPCSQDCY 106
           S+P KH +A+C+  D+     CY
Sbjct: 422 SNPCKHLDAICQ--DKLGDYACY 442


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -3

Query: 338 GITNDEGTEYRSNTRSGSSYSNCRCASTNEFGSR 237
           G  + +G E ++N       S  +C+   + GSR
Sbjct: 52  GKCSPDGQELKNNLADALQTSCSKCSQRQQDGSR 85


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 50  KHKNAVCRKIDRPCSQD 100
           KH+ AVC    RP   D
Sbjct: 132 KHQGAVCHLETRPNQSD 148


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -3

Query: 338 GITNDEGTEYRSNTRSGSSYSNCRCASTNEFGSR 237
           G  + +G E ++N       S  +C+   + GSR
Sbjct: 52  GKCSPDGQELKNNLADALQTSCSKCSQRQKDGSR 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,262
Number of Sequences: 336
Number of extensions: 1993
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)