Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I14
         (547 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ524115-1|ABI35627.1|  123|Homo sapiens immunoglobulin heavy ch...    30   6.1  
BC035035-1|AAH35035.1|  440|Homo sapiens ectonucleotide pyrophos...    30   6.1  
AY358676-1|AAQ89039.1|  440|Homo sapiens AVKL1889 protein.             30   6.1  
AK057370-1|BAB71455.1|  440|Homo sapiens protein ( Homo sapiens ...    30   6.1  

>DQ524115-1|ABI35627.1|  123|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 123

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 384 DTTEVYFSAKDGIYVFDAKTNKTDKYGTNT 473
           + T VY+ AKD I +F   TN  D +G  T
Sbjct: 88  EDTAVYYCAKDSITIFGVVTNAFDIWGQGT 117


>BC035035-1|AAH35035.1|  440|Homo sapiens ectonucleotide
           pyrophosphatase/phosphodiesterase 6 protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 417 GIYVFDAKTNKTDKYGTNTDSLIGIVKTNGSDVLYV 524
           G Y++D  TNK+   G N DSL+ +   NGS+ L+V
Sbjct: 91  GNYMWDPTTNKSFDIGVNKDSLMPL-WWNGSEPLWV 125


>AY358676-1|AAQ89039.1|  440|Homo sapiens AVKL1889 protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 417 GIYVFDAKTNKTDKYGTNTDSLIGIVKTNGSDVLYV 524
           G Y++D  TNK+   G N DSL+ +   NGS+ L+V
Sbjct: 91  GNYMWDPTTNKSFDIGVNKDSLMPL-WWNGSEPLWV 125


>AK057370-1|BAB71455.1|  440|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32808 fis, clone TESTI2002707, weakly similar to
           PLASMA-CELL MEMBRANE GLYCOPROTEIN PC-1 [INCLUDES:
           ALKALINE ).
          Length = 440

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 417 GIYVFDAKTNKTDKYGTNTDSLIGIVKTNGSDVLYV 524
           G Y++D  TNK+   G N DSL+ +   NGS+ L+V
Sbjct: 91  GNYMWDPTTNKSFDIGVNKDSLMPL-WWNGSEPLWV 125


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,678,623
Number of Sequences: 237096
Number of extensions: 1153526
Number of successful extensions: 2867
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2867
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)