Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I14
(547 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical ... 33 0.18
U49947-6|AAA93424.1| 85|Caenorhabditis elegans Hypothetical pr... 30 1.2
AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein. 30 1.2
AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein. 30 1.2
AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical ... 30 1.2
AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical ... 30 1.2
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 29 2.9
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 29 2.9
AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical ... 27 6.7
U41036-8|ABA61866.1| 590|Caenorhabditis elegans Dopamine recept... 27 8.8
U41036-7|ABA61865.1| 607|Caenorhabditis elegans Dopamine recept... 27 8.8
U41036-6|ABA61864.1| 605|Caenorhabditis elegans Dopamine recept... 27 8.8
AY485309-1|AAR37416.1| 607|Caenorhabditis elegans DOP-3 protein. 27 8.8
>AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical
protein Y39D8B.1 protein.
Length = 1372
Score = 32.7 bits (71), Expect = 0.18
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Frame = +3
Query: 279 VNDKGEKEYKGLYSLKNGVATKILETGTDASATNDDTTEVYFSAKDGIYVFDAKTNKTDK 458
+ D G++E+ +GV + + D+ F KDG ++ K N T+
Sbjct: 489 MEDTGQEEWMNFVLEASGVTETVEKMRIAEEKEQDEERRKDFVDKDGRPMYFTKENVTEI 548
Query: 459 YG----TNTDSLIGIVKTNGSDVLYVL 527
YG T D + GI KT D L L
Sbjct: 549 YGEYEATKIDLINGIYKTMSKDQLDAL 575
>U49947-6|AAA93424.1| 85|Caenorhabditis elegans Hypothetical
protein C30G4.5 protein.
Length = 85
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 166 SYLDEYWTNSFMNSSDDTMSFSSLFSVTGAAFIN 65
S LDE W +S + SDD++ S S TG F N
Sbjct: 40 SILDEKWRSSCSDDSDDSLPVGSYIS-TGQCFFN 72
>AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein.
Length = 510
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 477 YQCSFHICQSYLFSHRKRIYHL*LRNK 397
+Q S ICQ+ + H+K+I H LR K
Sbjct: 312 FQISLQICQAMSYLHKKKILHRDLRTK 338
>AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein.
Length = 550
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 477 YQCSFHICQSYLFSHRKRIYHL*LRNK 397
+Q S ICQ+ + H+K+I H LR K
Sbjct: 352 FQISLQICQAMSYLHKKKILHRDLRTK 378
>AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical
protein F58D5.4b protein.
Length = 510
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 477 YQCSFHICQSYLFSHRKRIYHL*LRNK 397
+Q S ICQ+ + H+K+I H LR K
Sbjct: 312 FQISLQICQAMSYLHKKKILHRDLRTK 338
>AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical
protein F58D5.4a protein.
Length = 550
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 477 YQCSFHICQSYLFSHRKRIYHL*LRNK 397
+Q S ICQ+ + H+K+I H LR K
Sbjct: 352 FQISLQICQAMSYLHKKKILHRDLRTK 378
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 84 VTENNDEKLIVSSELFINEFVQYSSKYDIV 173
VT+ D + +S+LFI+ FV+ + KYD++
Sbjct: 420 VTDARDHLKMQNSKLFISSFVRDNLKYDLI 449
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 84 VTENNDEKLIVSSELFINEFVQYSSKYDIV 173
VT+ D + +S+LFI+ FV+ + KYD++
Sbjct: 420 VTDARDHLKMQNSKLFISSFVRDNLKYDLI 449
>AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical
protein C48E7.6 protein.
Length = 1764
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 336 ATKILETGTDASATNDDTTEVYFSA--KDGIYVFDAKTNKTDKYGTNTDSLIGIV 494
AT + + +AS + + + ++ K G FD TN + Y TNTD GIV
Sbjct: 1501 ATPLTTSQINASTLLNSSPRFFLTSPLKFGRLTFDPNTNYSTYYFTNTDIQKGIV 1555
>U41036-8|ABA61866.1| 590|Caenorhabditis elegans Dopamine receptor
protein 3, isoformc protein.
Length = 590
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1
Query: 139 SFMNSSDDTMSFSSLFSVTGAAFINPIKNTTPKKS 35
SF SS TMS SS + T + IN N PKK+
Sbjct: 240 SFQTSSFPTMSESSEDASTISPMINSFNNFLPKKT 274
>U41036-7|ABA61865.1| 607|Caenorhabditis elegans Dopamine receptor
protein 3, isoformb protein.
Length = 607
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1
Query: 139 SFMNSSDDTMSFSSLFSVTGAAFINPIKNTTPKKS 35
SF SS TMS SS + T + IN N PKK+
Sbjct: 257 SFQTSSFPTMSESSEDASTISPMINSFNNFLPKKT 291
>U41036-6|ABA61864.1| 605|Caenorhabditis elegans Dopamine receptor
protein 3, isoforma protein.
Length = 605
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1
Query: 139 SFMNSSDDTMSFSSLFSVTGAAFINPIKNTTPKKS 35
SF SS TMS SS + T + IN N PKK+
Sbjct: 255 SFQTSSFPTMSESSEDASTISPMINSFNNFLPKKT 289
>AY485309-1|AAR37416.1| 607|Caenorhabditis elegans DOP-3 protein.
Length = 607
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1
Query: 139 SFMNSSDDTMSFSSLFSVTGAAFINPIKNTTPKKS 35
SF SS TMS SS + T + IN N PKK+
Sbjct: 257 SFQTSSFPTMSESSEDASTISPMINSFNNFLPKKT 291
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,143,172
Number of Sequences: 27780
Number of extensions: 206237
Number of successful extensions: 588
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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