Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I13
         (481 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    24   0.84 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   1.5  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   1.9  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   4.5  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   4.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   5.9  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 0.84
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 287 IPYFTTSGIQVRYLKIIEKSGY 352
           I  F TSG++   L+ ++KSGY
Sbjct: 157 ITSFETSGLRPHLLENVKKSGY 178


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 12/54 (22%), Positives = 24/54 (44%)
 Frame = -2

Query: 186 NDLIDHVIAFCSGVYLTLPIVVLNFGESASAGTGIIISTLLAVERLLNCDLALI 25
           ND+    + F +G ++   +V LNF  S      + +   L +  L+   + L+
Sbjct: 233 NDIFGWPLVFITGRFVIKILVALNFFTSTLEIDNLYLKHKLEISSLVQTAITLV 286


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +2

Query: 224 GLPSVVCEEVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQA 358
           G+  V+   +  KP    + E  +      + +Y K++EK G QA
Sbjct: 82  GVRKVLHHLIKNKPNWWQELEAKFDPKGEYKQKYNKLLEKEGLQA 126


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 186 NDLIDHVIAFCSGVYLTLPIVVLN 115
           N LI  ++A C G  L++P  +LN
Sbjct: 4   NMLIYLIVACCWGKSLSIPQQILN 27


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +2

Query: 251 VDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSG 349
           +D KP +  + E  Y  +   + +Y   +EK+G
Sbjct: 89  IDNKPDMWKQLEAKYDPSGEYRSKYKDELEKNG 121


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 236  VVCEEVDGKPPIQVKFE 286
            +  EEV G PP  ++ E
Sbjct: 989  ITAEEVPGGPPTSIRVE 1005


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,822
Number of Sequences: 336
Number of extensions: 2503
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)