Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I13
         (481 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        26   0.18 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        26   0.18 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        26   0.18 
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    24   0.74 
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    22   3.0  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    22   3.0  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    22   3.9  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   6.9  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 18/65 (27%), Positives = 27/65 (41%)
 Frame = +2

Query: 197 KEYLMRAHFGLPSVVCEEVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRY 376
           K   ++  FGLP  V   +   P  +   +  YF   G +V      +   + A PW  Y
Sbjct: 255 KVIYVKRFFGLPVGVTAAI---PTSENPADYRYFCPDGSKVPIDANTKPCTWAARPWQGY 311

Query: 377 ITQNG 391
           +T NG
Sbjct: 312 MTNNG 316


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 18/65 (27%), Positives = 27/65 (41%)
 Frame = +2

Query: 197 KEYLMRAHFGLPSVVCEEVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRY 376
           K   ++  FGLP  V   +   P  +   +  YF   G +V      +   + A PW  Y
Sbjct: 255 KVIYVKRFFGLPVGVTAAI---PTSENPADYRYFCPDGSKVPIDANTKPCTWAARPWQGY 311

Query: 377 ITQNG 391
           +T NG
Sbjct: 312 MTNNG 316


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 18/65 (27%), Positives = 27/65 (41%)
 Frame = +2

Query: 197 KEYLMRAHFGLPSVVCEEVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRY 376
           K   ++  FGLP  V   +   P  +   +  YF   G +V      +   + A PW  Y
Sbjct: 255 KVIYVKRFFGLPVGVTAAI---PTSENPADYRYFCPDGSKVPIDANTKPCTWAARPWQGY 311

Query: 377 ITQNG 391
           +T NG
Sbjct: 312 MTNNG 316


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 24.2 bits (50), Expect = 0.74
 Identities = 16/63 (25%), Positives = 26/63 (41%)
 Frame = +2

Query: 65  NNVEIIIPVPADADSPKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLMRAHFGLPSVVC 244
           NN+EII+  P     P     I S K   E    T S + +  G       +F + + + 
Sbjct: 344 NNIEIIVKDPETLQFPSGMKIISSKKDRQELWIFTISFQKYMSGTLNSNETNFRIQAGLV 403

Query: 245 EEV 253
           +E+
Sbjct: 404 DEL 406


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 251 VDGKPPIQVKFEIPYFTTSGIQVRYLK 331
           +D KP I V  E  Y  T   +  YL+
Sbjct: 94  IDNKPEIWVLLEAKYDPTGAYKQHYLQ 120


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 251 VDGKPPIQVKFEIPYFTTSGIQVRYLK 331
           +D KP I V  E  Y  T   +  YL+
Sbjct: 94  IDNKPEIWVLLEAKYDPTGAYKQHYLQ 120


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +2

Query: 245 EEVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQ 355
           ++VD + P+  +    Y    G QV    + +++G+Q
Sbjct: 61  KQVDNETPVVSQGSDSYTAPDGQQVSITYVADENGFQ 97


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 200 EYLMRAHFGLPSVVCEE 250
           EY +R HFG     CE+
Sbjct: 5   EYHLRNHFGSKPFKCEK 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,209
Number of Sequences: 438
Number of extensions: 2781
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)