Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I12
(492 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 25 0.37
AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase l... 23 1.1
DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc gr... 23 1.5
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 23 2.0
S78567-1|AAB34900.1| 141|Tribolium castaneum GABA receptor subu... 22 2.6
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 22 2.6
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 22 3.5
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 22 3.5
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 21 4.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 6.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 6.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 6.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 6.1
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 21 8.0
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 8.0
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 21 8.0
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 25.0 bits (52), Expect = 0.37
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -3
Query: 406 VLTVVMKNCEPLVLGPALAIESTPGPVCFRTKFSSPNFSP*MDFPPVPL 260
VL + M EP P++ PGP T F N+ P PP+PL
Sbjct: 143 VLNLTMPKYEP---NPSII---DPGPALPPTGFLCNNYPPLPQVPPLPL 185
Score = 21.8 bits (44), Expect = 3.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 445 TFPNTTCLPSSHEVLTVVMKNCEPLVLGPA 356
+ P TCLP S ++L + + VLG A
Sbjct: 216 SIPAFTCLPLSDQLLLLEESWLDLFVLGAA 245
>AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase like
protein E1 protein.
Length = 139
Score = 23.4 bits (48), Expect = 1.1
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 228 FMLQGGDFTNHNGTGGKSIYGEKF-GDENFVL 320
F + GGDF G+G +YG + EN VL
Sbjct: 78 FWIHGGDFV--TGSGTSEMYGPDYLMSENVVL 107
>DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc
growth factor 4 protein.
Length = 431
Score = 23.0 bits (47), Expect = 1.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 144 TCENFRALCTGEK 182
T ++FR LCTG K
Sbjct: 408 TLDDFRGLCTGNK 420
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 22.6 bits (46), Expect = 2.0
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -3
Query: 406 VLTVVMKNCEPLVLGPALAIESTPGPVCFRTKFSSPNFSP*MDFPPVPL 260
VL + M EP P++ PGP F N+ P PP+PL
Sbjct: 143 VLNLTMPKYEP---NPSII---DPGPALPPAGFLCNNYLPLPQVPPLPL 185
Score = 21.8 bits (44), Expect = 3.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 445 TFPNTTCLPSSHEVLTVVMKNCEPLVLGPA 356
+ P TCLP S ++L + + VLG A
Sbjct: 216 SIPAFTCLPLSDQLLLLEESWLDLFVLGAA 245
>S78567-1|AAB34900.1| 141|Tribolium castaneum GABA receptor subunit
protein.
Length = 141
Score = 22.2 bits (45), Expect = 2.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 142 LGVTSVLSSTTILPNGDPSAVTSKKTRGKDILVY 41
LGVT+VL+ TT++ +A K + K I VY
Sbjct: 102 LGVTTVLTMTTLM--SSTNAALPKISYVKSIDVY 133
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -3
Query: 454 PSTTFPNTTCLPSSHEVLTVVMKNCEPLVL 365
P TT NT+ L +++++ + +KN + VL
Sbjct: 524 PITTLSNTSLLGAANQLEELNLKNIDLTVL 553
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 21.8 bits (44), Expect = 3.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -1
Query: 486 HKAQLASQRPFLQLRFQTPHVYHPAM 409
H+ +L + PFL+ + P PA+
Sbjct: 296 HEIKLHDKTPFLKRPYPVPFALRPAV 321
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 21.8 bits (44), Expect = 3.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 415 SHEVLTVVMKNCEPLVL 365
SHE L+ ++ C PL L
Sbjct: 323 SHEELSAMVNRCHPLSL 339
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 21.4 bits (43), Expect = 4.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 361 VLTPMVRNSSLPLLRPHGWMVDMW 432
V P V +SLP + P G + W
Sbjct: 191 VNAPSVSPASLPSISPSGGFLPKW 214
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 145 VLGVTSVLSSTTILPNGDPSAVTS 74
VLG T++ + I+P GD + + S
Sbjct: 349 VLGGTALPDISEIIPTGDDTTMDS 372
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 145 VLGVTSVLSSTTILPNGDPSAVTS 74
VLG T++ + I+P GD + + S
Sbjct: 349 VLGGTALPDISEIIPTGDDTTMDS 372
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 145 VLGVTSVLSSTTILPNGDPSAVTS 74
VLG T++ + I+P GD + + S
Sbjct: 349 VLGGTALPDISEIIPTGDDTTMDS 372
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 145 VLGVTSVLSSTTILPNGDPSAVTS 74
VLG T++ + I+P GD + + S
Sbjct: 349 VLGGTALPDISEIIPTGDDTTMDS 372
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 20.6 bits (41), Expect = 8.0
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1
Query: 207 KWSLCSRSPSRQY 169
+WSLC+ + S +Y
Sbjct: 367 RWSLCNSARSNKY 379
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 20.6 bits (41), Expect = 8.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 97 GDPSAVTSKKTRGKDILV 44
GDPS + +TRG+ +V
Sbjct: 1476 GDPSDTLNPRTRGEKPIV 1493
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 20.6 bits (41), Expect = 8.0
Identities = 5/15 (33%), Positives = 12/15 (80%)
Frame = -2
Query: 467 HNVHSFNYVSKHHMS 423
H++H+ ++V HH++
Sbjct: 328 HHIHAQHHVVNHHVA 342
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,674
Number of Sequences: 336
Number of extensions: 2817
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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