Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I12
(492 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 244 8e-66
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 204 6e-54
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 180 1e-46
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 177 7e-46
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 151 4e-38
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 121 7e-29
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 107 7e-25
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 86 2e-18
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 59 4e-10
SPAC1B3.01c |||uracil phosphoribosyltransferase |Schizosaccharom... 26 2.7
SPAC1F8.03c |str3||siderophore-iron transporter Str3 |Schizosacc... 26 3.5
SPCC4B3.03c |||DUF21 domain protein|Schizosaccharomyces pombe|ch... 25 6.2
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 25 6.2
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 25 8.2
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 25 8.2
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 244 bits (596), Expect = 8e-66
Identities = 113/141 (80%), Positives = 118/141 (83%)
Frame = +3
Query: 69 FFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGD 248
FFDV A+G PLGRIV +L DV PKT NFRALCTGEKG+GY GSTFHRVIP FMLQGGD
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64
Query: 249 FTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRH 428
FT NGTGGKSIYGEKF DENF LKH PG+LSMANAGPNTNGSQFFITTV T WLDG+H
Sbjct: 65 FTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKH 124
Query: 429 VVFGNVVEGMDVVKPVELYGS 491
VVFG V EGMDVVK VE GS
Sbjct: 125 VVFGEVTEGMDVVKKVESLGS 145
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 204 bits (498), Expect = 6e-54
Identities = 92/137 (67%), Positives = 106/137 (77%)
Frame = +3
Query: 66 VFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGG 245
V+FD+ LGR+ + L PKT ENFRAL TGEKGFGY+GS FHRVIPNFM+QGG
Sbjct: 29 VYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGG 88
Query: 246 DFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGR 425
D T +GTGGKSIYG +F DENF L H PG+LSMANAGP++NGSQFFITTVKT WLDG
Sbjct: 89 DITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGH 148
Query: 426 HVVFGNVVEGMDVVKPV 476
HVVFG V+ G D+VK +
Sbjct: 149 HVVFGEVLSGYDIVKKI 165
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 180 bits (438), Expect = 1e-46
Identities = 88/141 (62%), Positives = 102/141 (72%), Gaps = 4/141 (2%)
Frame = +3
Query: 69 FFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG----YKGSTFHRVIPNFML 236
+F ++ DG I EL +V PKT +NF +LC G + G YKGS FHRVI NFML
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 237 QGGDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWL 416
QGGDFT NGTGG+SIYGEKF DENF LKH P +LSMANAGPNTNGSQFFITTV T L
Sbjct: 66 QGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHL 125
Query: 417 DGRHVVFGNVVEGMDVVKPVE 479
DG+HVVFG V++G V+ +E
Sbjct: 126 DGKHVVFGKVIQGKSTVRTIE 146
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 177 bits (431), Expect = 7e-46
Identities = 84/147 (57%), Positives = 103/147 (70%), Gaps = 7/147 (4%)
Frame = +3
Query: 60 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGE------KGFGYKGSTFHRVI 221
P VF D+ DG LGRI + L + + PKT ENFR CTGE K GYK STFHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
Query: 222 PNFMLQGGDFTNHNGTGGKSIYGEK-FGDENFVLKHTGPGVLSMANAGPNTNGSQFFITT 398
FM+QGGDF + +GTG +I+ + F DENF LKH PG+LSMANAG ++NG QFFITT
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITT 124
Query: 399 VKTSWLDGRHVVFGNVVEGMDVVKPVE 479
V +LDG+HVVFG V+EG D+VK +E
Sbjct: 125 VPCDFLDGKHVVFGEVIEGYDIVKEIE 151
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 151 bits (367), Expect = 4e-38
Identities = 75/129 (58%), Positives = 93/129 (72%), Gaps = 1/129 (0%)
Frame = +3
Query: 99 LGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGGK 278
LG+I++EL T+ PKTC+NF L ++G+ Y G FHRVIP+F++QGGD T G GG
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGT 65
Query: 279 SIYGEKFGDE-NFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVEG 455
SIYG+KF DE + L HTG G+LSMANAGPNTN SQFFIT T WLDG+H +FG VV G
Sbjct: 66 SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSG 125
Query: 456 MDVVKPVEL 482
+ V K + L
Sbjct: 126 LSVCKRMGL 134
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 121 bits (291), Expect = 7e-29
Identities = 63/127 (49%), Positives = 82/127 (64%), Gaps = 1/127 (0%)
Frame = +3
Query: 102 GRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGGKS 281
G I ++L + PK +NF E G+ Y + FHR+I NFM+QGGD +GTGG+S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGES 519
Query: 282 IYGEKFGDE-NFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 458
I+ + F DE + LKH P +SMAN+GPNTNGSQFFITT T WLDG+H +F G+
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGL 579
Query: 459 DVVKPVE 479
DVV +E
Sbjct: 580 DVVHRIE 586
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 107 bits (258), Expect = 7e-25
Identities = 59/127 (46%), Positives = 78/127 (61%), Gaps = 1/127 (0%)
Frame = +3
Query: 102 GRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGGKS 281
G I +EL TD P NF L ++G+ Y+ + FHR I FM+QGGD + G GG+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQS 340
Query: 282 IYGEKFGDENF-VLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 458
I+G+ F DE LKH G++SMAN G NTNGSQFFI LD +H +FG VV G+
Sbjct: 341 IWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGL 400
Query: 459 DVVKPVE 479
+V+ +E
Sbjct: 401 NVLDALE 407
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 86.2 bits (204), Expect = 2e-18
Identities = 51/117 (43%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Frame = +3
Query: 102 GRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGGKS 281
G I +EL PK C NF LC +G+ Y G+ HRV+P F++QGGD T G GG+S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGES 77
Query: 282 IYGEKFGDENFV-LKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVV 449
IYGE F E L+ G++ MA N SQFFIT T +G+ +FG VV
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 58.8 bits (136), Expect = 4e-10
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 15/138 (10%)
Frame = +3
Query: 99 LGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGGK 278
+G +V++L PKTCENF LC K Y F+ + N+ Q GD G GG+
Sbjct: 9 VGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGDGGR 65
Query: 279 SIY-----GEKF--GDENFVLKHTGPGVLSMANAGPNTN-------GSQFFIT-TVKTSW 413
++ G +F + N L H G++SM+ A ++ GSQF IT +
Sbjct: 66 CVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLEG 125
Query: 414 LDGRHVVFGNVVEGMDVV 467
LD R+ ++G V EG D +
Sbjct: 126 LDERYPIYGQVAEGFDTL 143
>SPAC1B3.01c |||uracil phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 219
Score = 26.2 bits (55), Expect = 2.7
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = -2
Query: 392 NEELRTIGVRTRISHREHSRSSMLQDEVLIAELLAVDGLSTGTIVVCKVTTLQHEVGDDT 213
N+ + G+ T I + RS + I L+ +GL+ + KVTT Q+ +
Sbjct: 14 NQTNQLKGLFTIIRDKTKPRSEFIFYANRIIRLIVEEGLNHLPVSSAKVTTAQNAEYEGV 73
Query: 212 VESGAFVAEALLASTESSEVFTGLR 138
+ G +++ + ES E GLR
Sbjct: 74 MFDGRICGVSIMRAGESME--QGLR 96
>SPAC1F8.03c |str3||siderophore-iron transporter Str3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 25.8 bits (54), Expect = 3.5
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -3
Query: 481 SSTGFTTSIPSTTFPNTTCLPSSHEVLTVVMKN-CEPLVLGPALAIESTP 335
SST ++ + +T N T + S+ E+ T ++ + C+P +LG I S P
Sbjct: 102 SSTTYSYQVYATASFNRTSMISTLEIATAIISSVCKP-ILGKFSDITSRP 150
>SPCC4B3.03c |||DUF21 domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 679
Score = 25.0 bits (52), Expect = 6.2
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 287 VDGLSTGTIVVCKVTTLQHEVGDDTVESGAF-VAEALLASTESSEV 153
V+ + IVV KVT HE D+V + V+ L T SS+V
Sbjct: 620 VEMVERNGIVVPKVTVTSHEDDVDSVHNTPMSVSSTLSVKTSSSKV 665
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.0 bits (52), Expect = 6.2
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Frame = -3
Query: 271 PVPLWFVKSPPCS------MKLGMTRWKVEPL*PKPFSPVQRARKFSQVLGVTSVLSSTT 110
PV LW P CS M+LG + +E L P+ ++P + V+ + ++ T
Sbjct: 616 PVVLWLNGGPGCSSLTGLFMELGPSSINIETLKPE-YNP-HSWNSNASVIFLDQPIN--T 671
Query: 109 ILPNGDPSAVTSKKTRGKDILVY 41
NGD S V T GKD+ +
Sbjct: 672 GFSNGDDS-VLDTVTAGKDVYAF 693
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 24.6 bits (51), Expect = 8.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 409 EVLTVVMKNCEPLVLGPALAIESTPGPVCFRTKF 308
EVL ++ L++G L + T GPV +T+F
Sbjct: 320 EVLGGLVSEANKLIIGNGLDPQVTLGPVVSKTQF 353
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 24.6 bits (51), Expect = 8.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 156 FRALCTGEKGFGYKGSTFHRVIP 224
F A+C EKG Y FH +P
Sbjct: 419 FDAICLLEKGITYSQHNFHLKLP 441
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,137,164
Number of Sequences: 5004
Number of extensions: 45243
Number of successful extensions: 169
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 192109570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -