Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I12
(492 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0160 + 1116160-1116678 228 2e-60
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 221 2e-58
09_06_0359 + 22508900-22509439 221 3e-58
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 211 2e-55
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 190 4e-49
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 189 1e-48
10_01_0309 + 3417602-3418147 182 2e-46
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 173 5e-44
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 173 8e-44
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 130 2e-37
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 147 5e-36
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 146 8e-36
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 134 5e-32
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 133 8e-32
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 125 2e-29
06_01_0214 + 1634171-1634173,1634263-1634742 124 4e-29
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 99 2e-21
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 90 1e-18
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 75 4e-14
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 69 2e-12
02_01_0086 + 613113-613532 62 3e-10
08_02_0053 + 11721658-11721689,11721960-11722710 54 5e-08
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 53 1e-07
01_01_0077 - 585670-585787,585921-586687 45 4e-05
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 42 4e-04
10_01_0310 + 3425099-3425218 36 0.018
04_04_0416 + 25042937-25043350,25044038-25044238,25044343-250445... 31 0.38
01_01_0626 - 4713943-4714515,4714645-4714853,4717310-4717628 30 1.2
03_05_0327 - 23154014-23154942,23155169-23155316,23155606-231566... 29 2.7
11_06_0211 + 21305535-21305895,21306512-21306761,21307543-213076... 28 3.5
03_02_0950 + 12661008-12662312,12662403-12662576 28 3.5
10_08_0914 + 21535519-21535797,21535961-21536339,21536425-215365... 28 4.7
01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,489... 28 4.7
12_02_0299 - 17051570-17052474,17053542-17053755 27 8.2
04_01_0437 + 5704279-5704788,5705133-5705207 27 8.2
01_01_0020 + 147147-147313,148450-148548,148634-148742,148856-14... 27 8.2
>02_01_0160 + 1116160-1116678
Length = 172
Score = 228 bits (557), Expect = 2e-60
Identities = 110/154 (71%), Positives = 118/154 (76%), Gaps = 7/154 (4%)
Frame = +3
Query: 51 MSLPRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG-------YKGSTF 209
MS RVFFD+T G+P GRIV+EL P+T ENFRALCTGEKG G YKGSTF
Sbjct: 1 MSNTRVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTF 60
Query: 210 HRVIPNFMLQGGDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFF 389
HRVIP FM QGGDFT NGTGG+SIYGEKF DE F KH PG+LSMANAGPNTNGSQFF
Sbjct: 61 HRVIPEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGPNTNGSQFF 120
Query: 390 ITTVKTSWLDGRHVVFGNVVEGMDVVKPVELYGS 491
I TV SWLDG+HVVFG VVEGMDVVK +E GS
Sbjct: 121 ICTVPCSWLDGKHVVFGRVVEGMDVVKAIEKVGS 154
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 221 bits (541), Expect = 2e-58
Identities = 101/142 (71%), Positives = 116/142 (81%), Gaps = 3/142 (2%)
Frame = +3
Query: 63 RVFFDVTAD---GSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFM 233
+V+FD++ G +GR+V+ L D P+T ENFRALCTGEKGFGYKGS+FHRVI +FM
Sbjct: 84 KVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVIKDFM 143
Query: 234 LQGGDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSW 413
+QGGDF NGTGGKSIYG F DENF L HTGPGV+SMANAGPNTNGSQFFI TVKT W
Sbjct: 144 IQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTVKTPW 203
Query: 414 LDGRHVVFGNVVEGMDVVKPVE 479
LDGRHVVFG V+EGMD+VK +E
Sbjct: 204 LDGRHVVFGQVIEGMDIVKMIE 225
>09_06_0359 + 22508900-22509439
Length = 179
Score = 221 bits (539), Expect = 3e-58
Identities = 101/151 (66%), Positives = 117/151 (77%), Gaps = 7/151 (4%)
Frame = +3
Query: 60 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG-------YKGSTFHRV 218
P+VFFD+ + GR+V+EL D PKT ENFR LCTGEKG G YKGS FHR+
Sbjct: 6 PKVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRI 65
Query: 219 IPNFMLQGGDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITT 398
IPNFM QGGDFT NGTGG+SIYG++F DENF L+HTGPGVLSMANAGPNTNGSQFFI T
Sbjct: 66 IPNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGPNTNGSQFFICT 125
Query: 399 VKTSWLDGRHVVFGNVVEGMDVVKPVELYGS 491
+T+WLDG+HVVFG VV+G VV+ +E GS
Sbjct: 126 TRTTWLDGKHVVFGKVVDGYTVVEKMEQVGS 156
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 211 bits (516), Expect = 2e-55
Identities = 99/149 (66%), Positives = 115/149 (77%), Gaps = 7/149 (4%)
Frame = +3
Query: 63 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG-------YKGSTFHRVI 221
+V+FDV DG P GR+V+ L PKT ENFRALCTGEKG G +KGS FHR+I
Sbjct: 52 KVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAFHRII 111
Query: 222 PNFMLQGGDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTV 401
P+FM+QGGDFT +G GG+SIYG KF DENF +KHTGPG+LSMANAG +TNGSQFFITTV
Sbjct: 112 PSFMIQGGDFTLGDGRGGESIYGTKFADENFKIKHTGPGLLSMANAGRDTNGSQFFITTV 171
Query: 402 KTSWLDGRHVVFGNVVEGMDVVKPVELYG 488
TSWLDG+HVVFG V+ GMDVV +E G
Sbjct: 172 TTSWLDGKHVVFGKVLSGMDVVYKIEAEG 200
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 190 bits (464), Expect = 4e-49
Identities = 91/150 (60%), Positives = 109/150 (72%), Gaps = 7/150 (4%)
Frame = +3
Query: 63 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG-------YKGSTFHRVI 221
+VFFD+T +G P GRIV+ L + PKT ENFRA+CTGEKG G YKG+ FHR+I
Sbjct: 41 KVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPFHRII 100
Query: 222 PNFMLQGGDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTV 401
P FM+QGGD + NGTG SIYG F DENF + H+ PG+LSMAN +TNGSQFFITTV
Sbjct: 101 PGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKINHSAPGLLSMANYAKDTNGSQFFITTV 160
Query: 402 KTSWLDGRHVVFGNVVEGMDVVKPVELYGS 491
K + LDG+HVVFG V+ GMDVV +E GS
Sbjct: 161 KLTRLDGKHVVFGKVLSGMDVVYKIEAEGS 190
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 189 bits (460), Expect = 1e-48
Identities = 84/116 (72%), Positives = 97/116 (83%)
Frame = +3
Query: 63 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQG 242
+ FFDV G P GRIV+ L +V PKT +NFRALCTG+KG+GYKG +FHR+I +FM+QG
Sbjct: 67 KCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDFMIQG 126
Query: 243 GDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTS 410
GDF N+NGTGG+SIYGE F DENF LKHTGPGVLSMANAGP+TNGSQFFI TVK S
Sbjct: 127 GDFQNNNGTGGRSIYGECFDDENFTLKHTGPGVLSMANAGPDTNGSQFFICTVKFS 182
>10_01_0309 + 3417602-3418147
Length = 181
Score = 182 bits (442), Expect = 2e-46
Identities = 89/156 (57%), Positives = 102/156 (65%), Gaps = 10/156 (6%)
Frame = +3
Query: 54 SLPRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKG-------FGYKGSTFH 212
S PRVF D+ G +GR+V+EL D P T ENFR LCTGE+ YKGS FH
Sbjct: 9 SNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFH 68
Query: 213 RVIPNFMLQGGDFTNHNGTGGKSIY---GEKFGDENFVLKHTGPGVLSMANAGPNTNGSQ 383
RV+P FM QGGD T NGTGG+S F DE F +KH GPGV+SMANAGPNTNGSQ
Sbjct: 69 RVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGSQ 128
Query: 384 FFITTVKTSWLDGRHVVFGNVVEGMDVVKPVELYGS 491
FFIT K WLDGRHV FG VV GM V+ ++ G+
Sbjct: 129 FFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGT 164
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 173 bits (422), Expect = 5e-44
Identities = 89/152 (58%), Positives = 103/152 (67%), Gaps = 8/152 (5%)
Frame = +3
Query: 48 KMSLPRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG--------YKGS 203
K P VF DV+ P R+V EL DV P+T ENFRALCTGE G G YKGS
Sbjct: 3 KKKNPIVFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGS 62
Query: 204 TFHRVIPNFMLQGGDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQ 383
FHRVI FM QGGDF+N +G+GG+SIYG F DENFVL+H G+LSMANAGPNTNGSQ
Sbjct: 63 LFHRVIKGFMAQGGDFSNGDGSGGESIYGGTFEDENFVLRHDERGLLSMANAGPNTNGSQ 122
Query: 384 FFITTVKTSWLDGRHVVFGNVVEGMDVVKPVE 479
FFIT S LD + VFG ++ G DV+K +E
Sbjct: 123 FFITFKHNSRLDRKSTVFGKLILGNDVLKRIE 154
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 173 bits (420), Expect = 8e-44
Identities = 90/162 (55%), Positives = 106/162 (65%), Gaps = 22/162 (13%)
Frame = +3
Query: 60 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGY--------------- 194
PR + DV+ G GRIVVEL V P+T ENFRALCTGEKG
Sbjct: 33 PRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKISLKAA 92
Query: 195 -------KGSTFHRVIPNFMLQGGDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMA 353
KGS HR++ FM+QGGD T +GTGG+SIYG F DENFVLKH G+LSMA
Sbjct: 93 SVCTRWTKGSCIHRIVKGFMVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLSMA 152
Query: 354 NAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVEGMDVVKPVE 479
NAGP+TNGSQFFITT +T LDG+HVVFG V++GM VV+ +E
Sbjct: 153 NAGPDTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSME 194
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 130 bits (314), Expect(2) = 2e-37
Identities = 72/134 (53%), Positives = 82/134 (61%), Gaps = 24/134 (17%)
Frame = +3
Query: 60 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGE---KGF--GYKGSTFHRVIP 224
P VFFDVT P GRI +EL D+ PKT ENFR CTGE G GYKG FHRVI
Sbjct: 37 PVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGCQFHRVIK 96
Query: 225 NFMLQGGDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSM------------------ 350
+FM+QGGD+ +GTG SIYG KF DENF+ KHTGPG+LSM
Sbjct: 97 DFMIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPGLLSMVRSYYIYIKLEQDIEASS 156
Query: 351 -ANAGPNTNGSQFF 389
AN+G N+NGSQ F
Sbjct: 157 KANSGVNSNGSQIF 170
Score = 42.7 bits (96), Expect(2) = 2e-37
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +3
Query: 381 QFFITTVKTSWLDGRHVVFGNVV-EGMDVVKPVE 479
QFFIT K WLD +HVVFG V+ +GM V+ +E
Sbjct: 200 QFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIE 233
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 147 bits (356), Expect = 5e-36
Identities = 69/100 (69%), Positives = 80/100 (80%)
Frame = +3
Query: 180 KGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANA 359
K F +GS FHRVI FM+QGGD T +GTGG+SIYG KF DENFVLKH G+LSMAN+
Sbjct: 113 KIFHVQGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANS 172
Query: 360 GPNTNGSQFFITTVKTSWLDGRHVVFGNVVEGMDVVKPVE 479
GPNTNGSQFFITT +T LDG+HVVFG V++GM VV+ VE
Sbjct: 173 GPNTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSVE 212
Score = 62.1 bits (144), Expect = 2e-10
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = +3
Query: 60 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG 191
PR F DV+ G GRIV+EL V P+T ENFRALCTGEKG G
Sbjct: 26 PRCFMDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGVG 69
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 146 bits (354), Expect = 8e-36
Identities = 76/146 (52%), Positives = 93/146 (63%), Gaps = 7/146 (4%)
Frame = +3
Query: 63 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG-------YKGSTFHRVI 221
RV+ DV DG +GRIV+ L DV PKT NFRALCTGE+G G YKGS FHR+I
Sbjct: 39 RVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRII 98
Query: 222 PNFMLQGGDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTV 401
P FM+QGGD +G G V++MAN+GP++NGSQF+ITT+
Sbjct: 99 PGFMIQGGDIVRGDGKGS---------------------VIAMANSGPDSNGSQFYITTI 137
Query: 402 KTSWLDGRHVVFGNVVEGMDVVKPVE 479
KTSWLDG HVVFG V++GMD V +E
Sbjct: 138 KTSWLDGEHVVFGRVIQGMDYVYAIE 163
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 134 bits (323), Expect = 5e-32
Identities = 71/128 (55%), Positives = 86/128 (67%), Gaps = 1/128 (0%)
Frame = +3
Query: 99 LGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGGK 278
+G I + L + PKT ENF C G+ Y FHRVI FM+Q GD +GTGG+
Sbjct: 504 MGDIHLRLYPEECPKTVENFTTHC--RNGY-YDNLIFHRVIKGFMIQTGDPLG-DGTGGQ 559
Query: 279 SIYGEKFGDE-NFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVEG 455
SI+G +F DE + L+H P LSMANAGPNTNGSQFFITTV T WLD +H VFG VV+G
Sbjct: 560 SIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKG 619
Query: 456 MDVVKPVE 479
MDVV+ +E
Sbjct: 620 MDVVQQIE 627
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 133 bits (321), Expect = 8e-32
Identities = 70/133 (52%), Positives = 88/133 (66%), Gaps = 1/133 (0%)
Frame = +3
Query: 75 DVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFT 254
+VT + S +G +E+ PKTC NF L +G+ Y FHR+I +F++QGGD T
Sbjct: 11 EVTLETS-MGAFTIEMYYKHAPKTCRNFLEL--SRRGY-YDNVIFHRIIKDFIVQGGDPT 66
Query: 255 NHNGTGGKSIYGEKFGDE-NFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHV 431
G GG+SIYG KF DE LKHTG G+LSMANAGPNTNGSQFFIT LDG+H
Sbjct: 67 G-TGRGGESIYGAKFEDEIRPELKHTGAGILSMANAGPNTNGSQFFITLAPCQSLDGKHT 125
Query: 432 VFGNVVEGMDVVK 470
+FG V +GM++VK
Sbjct: 126 IFGRVSKGMEIVK 138
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 125 bits (302), Expect = 2e-29
Identities = 66/127 (51%), Positives = 85/127 (66%), Gaps = 1/127 (0%)
Frame = +3
Query: 102 GRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGGKS 281
G + +EL D+TP+TCENF C E G+ Y G FHR I NFM+QGGD T G+GG+S
Sbjct: 354 GDLNLELHCDITPRTCENFLTHC--ENGY-YNGLIFHRSIKNFMIQGGDPTG-TGSGGES 409
Query: 282 IYGEKFGDE-NFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 458
I+G+ F DE N L H+G GV+SMAN+GP+TNGSQFFI L+ +H VFG VV G+
Sbjct: 410 IWGKPFKDELNSKLIHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFGMVVGGL 469
Query: 459 DVVKPVE 479
+ +E
Sbjct: 470 TTLSAME 476
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 124 bits (299), Expect = 4e-29
Identities = 67/128 (52%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
Frame = +3
Query: 99 LGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGGK 278
LG I E+ D P+T ENF ALC G+ Y G+ FHR I FM+QGGD T G GG
Sbjct: 9 LGDIKCEVFCDQAPRTAENFLALCAS--GY-YDGTIFHRNIKGFMIQGGDPTG-TGKGGT 64
Query: 279 SIYGEKFGDE-NFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVEG 455
SI+G+KF DE LKH GV+SMAN+GPNTNGSQFFIT K L+G + VF V+ G
Sbjct: 65 SIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQPHLNGHYTVFAKVIHG 124
Query: 456 MDVVKPVE 479
+V+ +E
Sbjct: 125 FEVLDLME 132
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 98.7 bits (235), Expect = 2e-21
Identities = 54/117 (46%), Positives = 75/117 (64%), Gaps = 2/117 (1%)
Frame = +3
Query: 102 GRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGGKS 281
G + +EL PK NF LC +G+ Y G+ FHRVI +F++QGGD T +GTGG+S
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQGGDPTG-SGTGGES 77
Query: 282 IYGEKFGDENFV-LKHTGPGVLSMANAG-PNTNGSQFFITTVKTSWLDGRHVVFGNV 446
IYG F DE L+ G+++ ANAG P++NGSQFFI+ + WLD ++ +FG V
Sbjct: 78 IYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDRCDWLDKKNTIFGKV 134
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 89.8 bits (213), Expect = 1e-18
Identities = 55/135 (40%), Positives = 75/135 (55%), Gaps = 9/135 (6%)
Frame = +3
Query: 99 LGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGGK 278
+G I V+L TD+ P T +NF LC K Y G FH+V +F+ Q GD T G GG
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLC---KMKYYNGCLFHKVEKDFLAQTGDPTG-TGAGGD 64
Query: 279 SIYGEKFGDE-NFV-------LKHTGPGVLSMANAGPNTNGSQFFIT-TVKTSWLDGRHV 431
S+Y +GD+ F L+H+ G ++MA+AG N N SQF+IT +LD +H
Sbjct: 65 SVYKFLYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVDYLDDKHT 124
Query: 432 VFGNVVEGMDVVKPV 476
VFG V EG D + +
Sbjct: 125 VFGMVAEGFDTLTKI 139
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 74.5 bits (175), Expect = 4e-14
Identities = 53/146 (36%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Frame = +3
Query: 45 TKMSLPRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIP 224
TK S P TA GS I +E+ D + + F +LC K +KG F VI
Sbjct: 88 TKTSRPSYAVIDTAKGS----ITIEIYKDASADVVDRFVSLC---KSNHFKGMPFRHVIK 140
Query: 225 NFMLQGGDFTNHNGTGGKSIYGEKFGDENFVL-KHTGPGVLSMANAGPNTNGSQFFITTV 401
NF++QGGDF + NG + I K EN + KH + + N PN G FITT
Sbjct: 141 NFVIQGGDF-DFNGAAQEWILKAKASGENALSPKHEAFMIGTTKN--PNNKGFDLFITTA 197
Query: 402 KTSWLDGRHVVFGNVVEGMDVVKPVE 479
L+ + VVFG V+ G D+V+ +E
Sbjct: 198 PIPDLNDKLVVFGQVINGQDIVQEIE 223
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 69.3 bits (162), Expect = 2e-12
Identities = 34/68 (50%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Frame = +3
Query: 60 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG--------YKGSTFHR 215
P VFFD+ G RI EL DV PKT ENFRALCTGE+G G +KG+ HR
Sbjct: 8 PHVFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLYFKGTNMHR 67
Query: 216 VIPNFMLQ 239
++ FM Q
Sbjct: 68 ILKGFMAQ 75
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3
Query: 366 NTNGSQFFITTVKTSWLDGRHVVFGNVVEGMDVVKPVELYGS 491
NT+ S V TS + +HVVFG VV GM ++K +E GS
Sbjct: 76 NTSLSPTPFLNVSTSCVS-KHVVFGKVVTGMPLLKKLEAVGS 116
>02_01_0086 + 613113-613532
Length = 139
Score = 61.7 bits (143), Expect = 3e-10
Identities = 40/122 (32%), Positives = 56/122 (45%)
Frame = +3
Query: 114 VELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGGKSIYGE 293
+EL D+ P T ENFRAL T +K YKG + P ++G +
Sbjct: 1 MELYADLVPLTAENFRALYT-KKPLHYKGLCLSQHYPRIHVEGRRLRQGPWHRRRVHLRR 59
Query: 294 KFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVEGMDVVKP 473
+ENF+L H P + N N SQFF + W DG +VVFG ++ G +K
Sbjct: 60 HLPNENFLLPHDRPW---LPNGSAENNISQFF---TRVPWFDGNYVVFGCIISGFHNLKA 113
Query: 474 VE 479
+E
Sbjct: 114 IE 115
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 54.4 bits (125), Expect = 5e-08
Identities = 42/141 (29%), Positives = 60/141 (42%), Gaps = 18/141 (12%)
Frame = +3
Query: 87 DGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNG 266
D PLGR++ L + P T NF+A CT Y+G+ H+++ G
Sbjct: 123 DSEPLGRVIFGLYGRLLPLTTANFKAACTSA---AYRGTLVHKLLQGQFFVAGRQGPRRD 179
Query: 267 TG------GKSIYGEKFGDENFVLKHTGPGVLSMA----------NAGPNTNGSQFFITT 398
G G E + F LKH PG LS+ PN + +F +TT
Sbjct: 180 RGEVQPPTGLVRNAETIDPKAFELKHARPGTLSLCLGQNDDDDDIKLNPNYHNVEFLVTT 239
Query: 399 --VKTSWLDGRHVVFGNVVEG 455
LDG+++VFG V+EG
Sbjct: 240 GPGPCPELDGQNIVFGTVLEG 260
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +3
Query: 318 LKHTGPGVLSMANAGPNTNGSQFFITTVK-TSWLDGRHVVFGNVVEGMDVVKPV 476
L+H+ G ++MA+AG N N SQF+IT +LD +H VFG V EG D + +
Sbjct: 116 LRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDTITKI 169
Score = 35.1 bits (77), Expect = 0.031
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 99 LGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHR 215
+G I V+L TD+ P T +NF LC G +G G F +
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLCKGNEGLVAGGLAFRK 47
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +3
Query: 63 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQG 242
+ F DV+ G P GRI + L D P F +L T G GY+ F +++P ++ G
Sbjct: 76 KAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVT---GVGYRRKEFVKIVPGYVQHG 132
Query: 243 G 245
G
Sbjct: 133 G 133
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 41.5 bits (93), Expect = 4e-04
Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 132 VTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQ-----GGDFTNHNGTGGKSIYGEK 296
V PKT E+ L G Y + F RV F+ Q GG N +
Sbjct: 94 VAPKTVEHIYKLV--RLGC-YNTNHFFRVDKGFVAQVASVVGGRTAPMNDEQQEEAEKSV 150
Query: 297 FGDENFVLKHTGPGVLSMA-NAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVEGMDVVKP 473
G+ + V KH G+LSM ++ PN+ GS F I LDG++ VFG + +G D ++
Sbjct: 151 VGEFSTV-KHVR-GILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDTLRK 208
Query: 474 VE 479
+E
Sbjct: 209 LE 210
>10_01_0310 + 3425099-3425218
Length = 39
Score = 35.9 bits (79), Expect = 0.018
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 93 SPLGRIVVELRTDVTPKTCENFRALCTG 176
S G +V+E D PKT ENFR +CTG
Sbjct: 5 SRAGSVVIEQFADKVPKTTENFRPMCTG 32
>04_04_0416 +
25042937-25043350,25044038-25044238,25044343-25044525,
25044975-25045084,25045317-25045376,25045620-25045911,
25046780-25046967,25047275-25048149,25048846-25049805,
25050025-25050068,25050860-25050925,25051176-25051364
Length = 1193
Score = 31.5 bits (68), Expect = 0.38
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -3
Query: 475 TGFTTSIPSTTFPNTTCLPSSHEVLTV-VMKNCEPLVLGPALAIE-STPGPVCFRTKFSS 302
+G T + + P C+ V+T + K + L+LG A + S P C +KF S
Sbjct: 590 SGIPTQVGQVSIPG--CIVHCFGVITEHLFKEVDCLLLGAAQGLVLSDPFRCCGSSKFKS 647
Query: 301 PNFSP*MDFPPVPL 260
NF PP+PL
Sbjct: 648 VNFPSISVVPPLPL 661
>01_01_0626 - 4713943-4714515,4714645-4714853,4717310-4717628
Length = 366
Score = 29.9 bits (64), Expect = 1.2
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = -3
Query: 322 FRTKF--SSPNFSP*MDFPPVPLWFVKSPPCSMKLGMTRWKVEPL*PKPFSPVQRARKFS 149
F+TKF + P F P + P+ LW PP +G + E L P P + + K
Sbjct: 251 FKTKFVLTMPTFYPALIPVPLTLW----PPNVANVGESGTNHEILKPTPVNGKEVINKAD 306
Query: 148 QVLGVTSVLSSTTILPNGDPSAVTSKKT 65
+V+G++ + + +PSA++ + T
Sbjct: 307 EVVGMSKLTIGDGSSNSIEPSALSLQLT 334
>03_05_0327 -
23154014-23154942,23155169-23155316,23155606-23156622,
23156753-23157217,23160258-23161247
Length = 1182
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 421 PSSHEVLTVVMKNCEPLVLGPALAIEST 338
P SHE+L V++ +V PAL++ S+
Sbjct: 440 PQSHEILKVLLPRLSDMVSDPALSVRSS 467
>11_06_0211 +
21305535-21305895,21306512-21306761,21307543-21307652,
21308836-21309067,21310233-21310603,21311434-21311507,
21311727-21311880,21312251-21312434,21313066-21313291,
21313704-21314135,21314399-21314456,21314748-21314829,
21315350-21315421,21316594-21316737,21317379-21317457,
21318023-21318105,21318198-21318252,21318488-21318778
Length = 1085
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 245 TTLQHEVGD-DTVESGAFVAEALLASTESSEVFTGLRSDVSSQLYNNPSQ 99
TTL E D DT++ F+ + ++ + +GLR +L++N S+
Sbjct: 631 TTLPDENHDSDTIDGDLFILKRIMVERGRAAYLSGLREKYFGELFSNASR 680
>03_02_0950 + 12661008-12662312,12662403-12662576
Length = 492
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 273 GKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQF 386
G ++ G N L+ + P ANA PN +GS F
Sbjct: 129 GSALGSSSRGQPNAPLRSSAPQTYKPANANPNPSGSPF 166
>10_08_0914 +
21535519-21535797,21535961-21536339,21536425-21536568,
21536681-21536730,21536820-21536877,21536979-21537208
Length = 379
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 358 RVLTPMVRNSS-LPLLRPHGWMVDMWCLE 441
RV M N+S LP + H W D+WC E
Sbjct: 230 RVQREMRSNASVLPYEKGHSWSPDIWCKE 258
>01_01_0645 +
4890647-4890682,4891684-4891929,4892021-4892317,
4892407-4892574,4892674-4892841,4892924-4893004,
4893105-4893171,4893657-4893751,4894027-4894099,
4894177-4894247,4894325-4894374,4895263-4895375,
4895461-4895513
Length = 505
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 454 PSTTFPNTTCLPSSHEVLTVVMKNCEPLVLGPALAIESTPGPVC 323
P T P T P +++ L G +A E+TPGP C
Sbjct: 55 PDFTLPGVTIPPPLPDLVEPGKTKITTLANGVKIASETTPGPSC 98
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -3
Query: 367 LGPALAIESTPGPVCFRTKFSSPNFSP*MDFPPVPLWFVKSPP 239
L P + S P P F P P FPP+P ++ PP
Sbjct: 280 LPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPP 322
>04_01_0437 + 5704279-5704788,5705133-5705207
Length = 194
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 45 TKMSLPRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG 191
T +L R + D A +PL V+E+ D + +G +GFG
Sbjct: 45 TSTALVRFYLDRVARLNPLLHAVIEVNPDALAQAARADAERASGRRGFG 93
>01_01_0020 +
147147-147313,148450-148548,148634-148742,148856-148927,
149056-149061,150811-150915,151048-151539,151629-152025,
152178-153646,154010-154450,154543-155214
Length = 1342
Score = 27.1 bits (57), Expect = 8.2
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -2
Query: 281 GLSTGTIVVCKVTTLQHEVGDDTVESGAFVAEALLASTESSEVFTGLRSDVSSQLYNNPS 102
GL +IVVC VT LQ + + F E L S SS + SD S+ +
Sbjct: 573 GLYKPSIVVCPVTLLQQWRREASRWYPKFKVEILHDSANSSSKKSKRSSDSDSEASWDSD 632
Query: 101 QR*SISC 81
Q +++C
Sbjct: 633 QEEAVTC 639
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,391,007
Number of Sequences: 37544
Number of extensions: 327795
Number of successful extensions: 957
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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