Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I12
(492 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 246 6e-66
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 242 1e-64
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 199 1e-51
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 167 4e-42
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 99 2e-21
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 87 6e-18
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 84 7e-17
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 82 2e-16
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 2e-16
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 82 3e-16
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11) 54 8e-08
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06) 33 0.097
SB_43841| Best HMM Match : PXA (HMM E-Value=1e-16) 30 0.90
SB_30693| Best HMM Match : Protamine_P1 (HMM E-Value=6.3) 29 1.6
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_24760| Best HMM Match : PT (HMM E-Value=0.17) 29 2.1
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13) 28 3.6
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 28 3.6
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 4.8
SB_20103| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_28202| Best HMM Match : Cadherin (HMM E-Value=1.8e-29) 28 4.8
SB_3760| Best HMM Match : SVA (HMM E-Value=0.19) 28 4.8
SB_19689| Best HMM Match : VWA (HMM E-Value=0.0035) 27 6.4
SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2) 27 6.4
SB_34249| Best HMM Match : fn3 (HMM E-Value=0) 27 8.4
SB_33080| Best HMM Match : SEP (HMM E-Value=4.48416e-44) 27 8.4
SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 246 bits (603), Expect = 6e-66
Identities = 110/144 (76%), Positives = 121/144 (84%)
Frame = +3
Query: 60 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQ 239
PRVFFD+T GRIV+ELR+DV P T ENFR LCT EKGFGYKGS+FHR+IP FM Q
Sbjct: 137 PRVFFDITIGERSAGRIVMELRSDVVPMTAENFRCLCTHEKGFGYKGSSFHRIIPQFMCQ 196
Query: 240 GGDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLD 419
GGDFT HNGTGGKSIYG KF DENFVLKHTG GVLSMAN+GPNTNGSQFF+TT KT WLD
Sbjct: 197 GGDFTKHNGTGGKSIYGAKFEDENFVLKHTGAGVLSMANSGPNTNGSQFFLTTEKTDWLD 256
Query: 420 GRHVVFGNVVEGMDVVKPVELYGS 491
G+HVVFGNV+EG DVV+ +E GS
Sbjct: 257 GKHVVFGNVIEGFDVVRKMEAVGS 280
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 242 bits (593), Expect = 1e-64
Identities = 108/141 (76%), Positives = 120/141 (85%)
Frame = +3
Query: 69 FFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGD 248
+FD+ G+P GRIV+ELR DV PKT ENFRALCTGEKGFGYKGS+FHRVIP FM QGGD
Sbjct: 6 YFDIEIGGAPAGRIVMELRDDVVPKTAENFRALCTGEKGFGYKGSSFHRVIPGFMCQGGD 65
Query: 249 FTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRH 428
FT +GTGGKSIYG KF DENF LKHTGPG+LSMANAGP TNGSQFF+ T KTSWLDG+H
Sbjct: 66 FTRGDGTGGKSIYGAKFADENFNLKHTGPGILSMANAGPGTNGSQFFLCTAKTSWLDGKH 125
Query: 429 VVFGNVVEGMDVVKPVELYGS 491
VVFG+V +GMDVVK +E GS
Sbjct: 126 VVFGSVKDGMDVVKKIEKVGS 146
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 199 bits (485), Expect = 1e-51
Identities = 91/139 (65%), Positives = 106/139 (76%)
Frame = +3
Query: 63 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQG 242
+V+ DV+ G P GR+++ L D PKT NF AL E+GFGYK S FHRVI NFM+QG
Sbjct: 27 KVWMDVSIGGQPAGRVILGLFGDTAPKTVANFVALADKEQGFGYKDSIFHRVIKNFMIQG 86
Query: 243 GDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDG 422
GDFTN +GTGG SIYG+ F DENF LKH GPG L MANAG NTNGSQF+ITT+KTSWLDG
Sbjct: 87 GDFTNKDGTGGYSIYGKYFDDENFNLKHYGPGWLCMANAGKNTNGSQFYITTIKTSWLDG 146
Query: 423 RHVVFGNVVEGMDVVKPVE 479
H FG V+EGMDVV+ +E
Sbjct: 147 SHTCFGKVLEGMDVVRRIE 165
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 167 bits (406), Expect = 4e-42
Identities = 89/152 (58%), Positives = 104/152 (68%), Gaps = 18/152 (11%)
Frame = +3
Query: 63 RVFFDVTADGSPLGRIVVELRTDV------TPKTCE-----NFRAL-----CT--GEKGF 188
+VFFD+T G GRI + L + + E NFR CT +KGF
Sbjct: 28 KVFFDITIGGEKAGRIEIGLFVIIKTYYLLATRLVESLIGTNFRYFDTYYCCTIESQKGF 87
Query: 189 GYKGSTFHRVIPNFMLQGGDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPN 368
GYK S FHRVI +FM+QGGDFT +GTGGKSIYG+KF DENF L+H G G LSMANAG +
Sbjct: 88 GYKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQKFADENFKLQHYGAGWLSMANAGKD 147
Query: 369 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMDV 464
TNGSQFFITTVKT WLDGRHVVFG V++GM+V
Sbjct: 148 TNGSQFFITTVKTPWLDGRHVVFGKVLKGMEV 179
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 98.7 bits (235), Expect = 2e-21
Identities = 46/75 (61%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Frame = +3
Query: 261 NGTGGKSIYGEKFGDE-NFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVF 437
+GTGG+SI+G +F DE + L+H P +SMANAGPNTNGSQFFIT V T WLD +H VF
Sbjct: 2 DGTGGESIWGGEFEDEFHRNLRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVF 61
Query: 438 GNVVEGMDVVKPVEL 482
G VV+GMDV + + L
Sbjct: 62 GRVVKGMDVAQQISL 76
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 87.4 bits (207), Expect = 6e-18
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = +3
Query: 321 KHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVEGMDVVKPVE 479
+H PG+LSMAN+GPNTNGSQFFITTV T LDGRHVVFG V++GMDVV+ +E
Sbjct: 188 EHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVVRELE 240
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 83.8 bits (198), Expect = 7e-17
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = +3
Query: 261 NGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFG 440
NGTGG+SIYG FGDE F KH P +LSMAN GPNTNGSQFFI HVVFG
Sbjct: 25 NGTGGESIYGGTFGDECFEFKHERPMLLSMANRGPNTNGSQFFII----------HVVFG 74
Query: 441 NVVEGMDVVKPVE 479
+V++G ++V+ +E
Sbjct: 75 HVIQGEELVRQIE 87
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 82.2 bits (194), Expect = 2e-16
Identities = 35/72 (48%), Positives = 50/72 (69%)
Frame = +3
Query: 264 GTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGN 443
G GG+S+YG F DE+F + H GV+ MAN G +TNGSQF+IT W+D ++V FG
Sbjct: 46 GIGGESVYGPLFEDEDFSVAHNRRGVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQ 105
Query: 444 VVEGMDVVKPVE 479
V+EG++V+ +E
Sbjct: 106 VIEGLNVLDVLE 117
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 82.2 bits (194), Expect = 2e-16
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +3
Query: 348 MANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVEGMDVVKPVE 479
MANAG +TNGSQFFITTVKTSWLDG+HVVFG V+EGMDVV+ +E
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKLE 44
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 81.8 bits (193), Expect = 3e-16
Identities = 35/44 (79%), Positives = 40/44 (90%)
Frame = +3
Query: 339 VLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVEGMDVVK 470
+LSMANAGP TNGSQFF+ T KTSWLDG+HVVFG+V +GMDVVK
Sbjct: 2 ILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVK 45
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 62.9 bits (146), Expect = 1e-10
Identities = 48/132 (36%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Frame = +3
Query: 99 LGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGGK 278
LG I +EL D P + NF A + G+ Y G+ FHRVIP FM+QGG F
Sbjct: 32 LGEIEIELDADKAPISTANFLAYV--DSGY-YAGTQFHRVIPGFMVQGGGFDADMQQKDT 88
Query: 279 SIYGEKFGDENFVLKHTGPGVLSMANAGPNTNG-SQFFITTVKTSWLDG-----RHVVFG 440
+ D H G L+MA + SQFFI ++LD + VFG
Sbjct: 89 QAPIKNEADNGL---HNVRGTLAMARTQVRDSATSQFFINHKDNAFLDHGSRDFGYAVFG 145
Query: 441 NVVEGMDVVKPV 476
VV+GMDVV +
Sbjct: 146 KVVKGMDVVDKI 157
>SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11)
Length = 48
Score = 53.6 bits (123), Expect = 8e-08
Identities = 27/46 (58%), Positives = 29/46 (63%), Gaps = 8/46 (17%)
Frame = +3
Query: 102 GRIVVELRTDVTPKTCENFRALCTGEKGFG--------YKGSTFHR 215
GR++ EL D PKT ENFRALCTGEKG G YKG FHR
Sbjct: 2 GRVLFELFADKVPKTAENFRALCTGEKGIGPSTGKPLHYKGCPFHR 47
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +3
Query: 324 HTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFG 440
H G +SMAN GPN+NGSQFFI K LD ++ +FG
Sbjct: 301 HNARGTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFG 339
>SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06)
Length = 454
Score = 33.5 bits (73), Expect = 0.097
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 99 LGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVI 221
+G I +EL TPK C NF LC +G+ Y + FHR++
Sbjct: 12 VGDIDIELWGKETPKACRNFIQLCL--EGY-YDNTIFHRIV 49
>SB_43841| Best HMM Match : PXA (HMM E-Value=1e-16)
Length = 848
Score = 30.3 bits (65), Expect = 0.90
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +3
Query: 231 MLQGGDFTNHNGTGGKSIYGEKFGDENFVLKHTGPG-VLSMANAGPNTNGSQFFITTVKT 407
+L G D+T+HN K + + K TGP +LS A N+ FF++ ++
Sbjct: 359 LLGGPDYTSHNQAENKPSTTPEQKPKP-TNKVTGPTKMLSFAEIMDNSLARSFFMSFLQN 417
Query: 408 SWLDGRHVVFGNVVEGMDVVKPVELYGS 491
+ F +E + +VKP E+ S
Sbjct: 418 HTHSRNLLSFWMAIENLRLVKPAEIVKS 445
>SB_30693| Best HMM Match : Protamine_P1 (HMM E-Value=6.3)
Length = 250
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 181 FSPVQRARKFSQVLGVTSVLSSTTILPNGDPSAVTSKKT 65
FS V +F Q+L V + I+P+G P+A S T
Sbjct: 195 FSQVMSRNRFFQILQYIHVSDDSNIVPSGQPTATDSNCT 233
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -3
Query: 466 TTSIPSTTF-PNTTCLPSSHEVLTVVMKNCEPLVLGPALAIESTPGP 329
TT +P TT P TT P S EV M + + EST GP
Sbjct: 1957 TTMVPGTTLEPGTTITPKSTEVPPTTMTPESTVTPETTMVPESTVGP 2003
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -3
Query: 466 TTSIP-STTFPNTTCLPSSHEVLTVVMKNCEPLVLGPALAIESTPGP 329
+T IP ST P TT P S EV M + G +A EST P
Sbjct: 2377 STEIPNSTVVPGTTISPKSTEVPPTTMTAESTVAPGTTMAPESTVTP 2423
>SB_24760| Best HMM Match : PT (HMM E-Value=0.17)
Length = 422
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = -3
Query: 469 FTTSIPSTTFPNTTCLPSSHEVLTVVMKNCEPLVLGPALAIESTPGP 329
FTT PST P T PS+ E +T EP GP PGP
Sbjct: 33 FTTGEPSTWEPMTGA-PSTWEPMTGAPSTWEPWTDGPGPYPTDGPGP 78
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -3
Query: 478 STGFTTSIPSTTFPNTTCLPSSHEVLTVVMKNCEPLVLGPALAIESTPGPVCFRTKFSSP 299
ST TT++P +T TT +P S + T V ++ + P +T GP +SP
Sbjct: 1300 STDGTTAVPIST-DGTTAVPISTDGTTAVPRSMDGTTASPLSTYGTTAGPTSTDGTTTSP 1358
>SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13)
Length = 278
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 153 NFRALCTGEKGFGYKGSTF 209
NF + TG+KGFG++G F
Sbjct: 67 NFSSYSTGQKGFGFEGMDF 85
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 153 NFRALCTGEKGFGYKGSTF 209
NF + TG+KGFG++G F
Sbjct: 132 NFSSYSTGQKGFGFEGMDF 150
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -3
Query: 481 SSTGFTTSIPSTTF-PNTTCLPSSHEVLTVVMKNCEPLVLGPALAIESTPGP 329
+S TT P TTF P TT P S + + + LA+EST P
Sbjct: 27 TSAADTTLAPETTFAPETTVPPESTAAPDTTVAPETTVAIESTLALESTVAP 78
>SB_20103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = -3
Query: 454 PSTTFPNTTCLPSSHEVLTVVMKNCEPL-VLGPALAIESTPGPVCFRTKFSSPN---FSP 287
P T C +E+ + K+ + V+ ++ IE+ PGPV S+P F
Sbjct: 508 PKTRKHQGACFKYDYEIKPLKEKSRQQRRVIAKSIDIETNPGPVTSTVTDSTPKPPVFGD 567
Query: 286 *MDFP 272
MDFP
Sbjct: 568 IMDFP 572
>SB_28202| Best HMM Match : Cadherin (HMM E-Value=1.8e-29)
Length = 242
Score = 27.9 bits (59), Expect = 4.8
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +3
Query: 66 VFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGG 245
V +VT GSP + + DVTPK + E + V+ +F + GG
Sbjct: 1 VVVNVTDGGSPALKSRAMVVIDVTPKPRNLTYDVSVLEGEANVQVMDLKPVVSHFNVSGG 60
Query: 246 DFTNHNGTG 272
+FT N +G
Sbjct: 61 NFTFFNSSG 69
>SB_3760| Best HMM Match : SVA (HMM E-Value=0.19)
Length = 259
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = -3
Query: 442 FPNTTCLPSSHE-----VLTVVMKNCEPLVLGPALAIESTPGP 329
FP + LP S E +LT++++N P + PA ++ P P
Sbjct: 81 FPQPSLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_19689| Best HMM Match : VWA (HMM E-Value=0.0035)
Length = 885
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 108 IVVELRTDVTPKTCENFRALCTG-EKGFGYKGST 206
I++ L + V+PKT E+ R LC G +GF +T
Sbjct: 574 IIIALDSGVSPKTFEDERQLCAGLLEGFSLAPNT 607
>SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2)
Length = 175
Score = 27.5 bits (58), Expect = 6.4
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +3
Query: 426 HVVFGNVVEGMDVVKPVE 479
HVVFG+V++G ++V+ +E
Sbjct: 3 HVVFGHVIQGEELVRQIE 20
>SB_34249| Best HMM Match : fn3 (HMM E-Value=0)
Length = 2195
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -3
Query: 439 PNTTCLPSSHEVLTVVMKNCEPLVLGPALAIESTPGPVCFRTKFSSPN 296
PN T +T+ + + E LVLG +A P R +F PN
Sbjct: 1694 PNVTGFSLDGNSMTLDIVSSEGLVLGYTVAYYPVGSPYSLRERFFGPN 1741
>SB_33080| Best HMM Match : SEP (HMM E-Value=4.48416e-44)
Length = 268
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 175 ARRASATKAPLSTVSSPTSCCR 240
ARR S T+ PL TV + TSC +
Sbjct: 46 ARRLSDTETPLQTVYTRTSCLK 67
>SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1110
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Frame = -3
Query: 442 FPNTTCLPSSHE-----VLTVVMKNCEPLVLGPALAIESTPGP 329
FP LP S E +LT++++N P + PA ++ P P
Sbjct: 81 FPQPPLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,197,202
Number of Sequences: 59808
Number of extensions: 362775
Number of successful extensions: 1119
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1050596726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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