Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I12
         (492 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   2.5  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   5.7  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   7.5  
AY787484-1|AAV87217.1|   70|Anopheles gambiae GABA receptor subu...    22   9.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   9.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 3/95 (3%)
 Frame = -3

Query: 391 MKNCEPLVLGPALAIESTPGPVCFRTKFSSPNFSP*MDFPPVPLW--FVKSPPCSMKLGM 218
           MKNC+   + P      +  PV      SSP  SP +   P P     +   P S  L  
Sbjct: 343 MKNCKSCSISPVSDRSESVSPVPSLPVRSSPEPSPVLLRSPTPAKKPLISVAPASKLLSK 402

Query: 217 T-RWKVEPL*PKPFSPVQRARKFSQVLGVTSVLSS 116
           + +    P  P P S  +R        G+ + +SS
Sbjct: 403 SLQPSTLPTRPSPKSSRKRRTGHRPPAGMNASMSS 437


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 191 LQRLHFPPCHPQLHAA 238
           +  LH PP HP  H A
Sbjct: 220 ISSLHAPPSHPGAHRA 235


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 142 RPVKTSELSVLARRASATKAPLSTVSSPTSCCRV 243
           RP + SELSV   +    K+    + SPT+  R+
Sbjct: 814 RPRRLSELSVKKSKKPIPKSNALLIFSPTNRFRI 847


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 184 PFSPVQRARKFSQVLGVTSVLSSTTILPN 98
           PF+P++R   +  V  + S+   TTIL N
Sbjct: 137 PFNPIRRVAIYILVHPLFSLFIITTILVN 165


>AY787484-1|AAV87217.1|   70|Anopheles gambiae GABA receptor subunit
           protein.
          Length = 70

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -3

Query: 142 LGVTSVLSSTTILPNGDPSAVTSKKTRGKDILVY 41
           LGVT+VL+ TT++     +A   K +  K I VY
Sbjct: 33  LGVTTVLTMTTLM--SSTNAALPKISYVKSIDVY 64


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 6/12 (50%), Positives = 6/12 (50%)
 Frame = +2

Query: 209 PPCHPQLHAAGW 244
           PPCHP      W
Sbjct: 158 PPCHPSCEVGCW 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,142
Number of Sequences: 2352
Number of extensions: 11776
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)