Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I11
         (438 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    57   6e-11
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   0.96 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.3  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   2.2  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   3.9  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   6.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    20   9.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    20   9.0  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 57.2 bits (132), Expect = 6e-11
 Identities = 26/61 (42%), Positives = 41/61 (67%)
 Frame = +1

Query: 130 MTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPI 309
           +T+FE  G+ P L + +++  +  PT +Q  A+P+IL G D++  A+T SGKT AF LPI
Sbjct: 157 ITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPI 216

Query: 310 L 312
           +
Sbjct: 217 I 217


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 0.96
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 31  VQLCCHQVPTPLFYFHNRLLSNL 99
           + +  +Q+ TPLF+FH+ + S L
Sbjct: 86  IGILLNQLITPLFFFHSFMTSVL 108


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 13  PPYCHPVQLCCHQVPTPL 66
           PP C    +C HQV  PL
Sbjct: 559 PPDCGQNCMCTHQVDIPL 576


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 32  FSSVVIRFQHLYFIFITVC 88
           F+S +  F H++F F   C
Sbjct: 64  FNSYMYAFTHIFFFFAICC 82


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 70  KIEVLEPDDNRAEQGDNKAVSL 5
           K+  L+PDDN   +G+   V++
Sbjct: 205 KMRGLQPDDNNRLRGETLEVAI 226


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 296 KAPVLPLHVSAAIRTSPPPNI 234
           KAP LP H    +  + P N+
Sbjct: 17  KAPELPEHWEGVLDATKPGNV 37


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 11/44 (25%), Positives = 16/44 (36%)
 Frame = +3

Query: 294 FLFAYTADCLGDFERYARGENKRRNTTDFH*VDNVVFGSHDCIS 425
           F  AY  + L        G+    NT  FH   N+      C++
Sbjct: 98  FGVAYPGELLAILGSSGAGKTTLLNTLTFHTSSNLTVSGLRCVN 141


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 11/44 (25%), Positives = 16/44 (36%)
 Frame = +3

Query: 294 FLFAYTADCLGDFERYARGENKRRNTTDFH*VDNVVFGSHDCIS 425
           F  AY  + L        G+    NT  FH   N+      C++
Sbjct: 98  FGVAYPGELLAILGSSGAGKTTLLNTLTFHTSSNLTVSGLRCVN 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,620
Number of Sequences: 336
Number of extensions: 1972
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)