Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I11
(438 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 53 1e-07
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 6e-07
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 1e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 3e-06
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 47 6e-06
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 47 6e-06
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 47 6e-06
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 47 6e-06
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 46 1e-05
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 45 2e-05
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 42 2e-04
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 41 4e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 40 0.001
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.008
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 36 0.015
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 36 0.019
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.034
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 33 0.14
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 31 0.55
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 30 0.73
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.73
SB_18011| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_58407| Best HMM Match : TNFR_c6 (HMM E-Value=3.5e-05) 27 5.1
SB_53316| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_46138| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 27 8.9
SB_46186| Best HMM Match : zf-RanBP (HMM E-Value=0.45) 27 8.9
SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19) 27 8.9
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQI 318
F +F + + + + PTD+Q + +P+ L G DVL AA+T SGKT AF +PI++
Sbjct: 52 FSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPIIET 111
Query: 319 VW 324
+W
Sbjct: 112 LW 113
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 50.4 bits (115), Expect = 6e-07
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = +1
Query: 136 AFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPIL 312
+F FG ++ +I ++++ PT +Q +A+P+ L G D++ A+T SGKT AF P L
Sbjct: 518 SFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPAL 576
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 49.6 bits (113), Expect = 1e-06
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +1
Query: 130 MTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPI 309
+ +FEE + + + + PT VQ ++P+++ G DV+ A+T SGKT AF LP+
Sbjct: 710 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKTAAFLLPV 769
Query: 310 L 312
+
Sbjct: 770 M 770
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 49.2 bits (112), Expect = 1e-06
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +1
Query: 130 MTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPI 309
+T+F E +L I + PT VQ A+P+++ G D++ A+T SGKT A+ LP+
Sbjct: 478 ITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPV 537
Query: 310 L 312
L
Sbjct: 538 L 538
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 48.4 bits (110), Expect = 3e-06
Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +1
Query: 130 MTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVP-LILGGGDVLMAAET*SGKTGAFCLP 306
M +E GV P++ +A+ + ++ PT +Q+ ++P +L D++ AAET SGKT AF +P
Sbjct: 129 MPEWEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIP 188
Query: 307 ILQ 315
I+Q
Sbjct: 189 IIQ 191
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 47.2 bits (107), Expect = 6e-06
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +1
Query: 172 KAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQ 315
+A+ E+ + PT +QA +P+ L G DV A T +GKT AF LPIL+
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILE 70
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 47.2 bits (107), Expect = 6e-06
Identities = 19/62 (30%), Positives = 39/62 (62%)
Frame = +1
Query: 136 AFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQ 315
+F + + PEL + + ++ +PT +Q +++ ++ G D++ AET SGKT A+ LP+
Sbjct: 73 SFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCM 132
Query: 316 IV 321
++
Sbjct: 133 LL 134
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 47.2 bits (107), Expect = 6e-06
Identities = 21/59 (35%), Positives = 38/59 (64%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQ 315
FE++ + EL I E ++ P+ +Q E++P+ L G D+L A+ +GKT A+ +P+L+
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLE 107
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 47.2 bits (107), Expect = 6e-06
Identities = 21/59 (35%), Positives = 38/59 (64%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQ 315
FE++ + EL I E ++ P+ +Q E++P+ L G D+L A+ +GKT A+ +P+L+
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLE 107
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/63 (42%), Positives = 33/63 (52%)
Frame = +1
Query: 127 TMTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLP 306
T +F G+ L M PT++Q VP IL G D + A+T SGKT AF LP
Sbjct: 5 TTCSFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALP 64
Query: 307 ILQ 315
ILQ
Sbjct: 65 ILQ 67
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = +1
Query: 178 IEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQIVW 324
++++ + PT +Q +A+P+ L D++ AET SGKT AF +P+L VW
Sbjct: 116 VDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPLL--VW 162
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +1
Query: 202 PTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQIVW 324
PT VQ A+P++ G D++ A+T SGKT AF +PIL ++
Sbjct: 898 PTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPILSRIY 938
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQ 315
F FGV P+L + +++M P +Q +A+P + +L+ +ET +GK+ F LP +Q
Sbjct: 162 FSNFGVHPKLVEKLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSVQ 220
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 41.1 bits (92), Expect = 4e-04
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +1
Query: 124 HTMTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*S--GKTGAF 297
++ +FEE + L + + +M +N P+ +Q A+P++L V M A++ S GKT AF
Sbjct: 100 YSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAF 159
Query: 298 CLPILQIV 321
L +L V
Sbjct: 160 VLTMLSRV 167
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 130 MTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKT 288
+ +FEE + + + + PT VQ ++P+++ G DV+ A+T SGKT
Sbjct: 133 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKT 185
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 36.7 bits (81), Expect = 0.008
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +1
Query: 202 PTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQIVWETLKDMQ 345
P+ +Q A+ IL G DV+ A++ +GKT F + +LQ + L++ Q
Sbjct: 20 PSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQ 67
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 35.9 bits (79), Expect = 0.015
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 166 LGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGK 285
L K + ++ PT +Q + +P++L G DV++ A T SGK
Sbjct: 207 LSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGK 246
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 35.5 bits (78), Expect = 0.019
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +1
Query: 250 DVLMAAET*SGKTGAFCLPILQ 315
DV+ AET SGKTGAF LPILQ
Sbjct: 3 DVIGLAETGSGKTGAFALPILQ 24
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 34.7 bits (76), Expect = 0.034
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 220 EAVPLILGGGDVLMAAET*SGKTGAFCLPILQ 315
+ +PL++ G DV+ A T SGKT AF +P+ +
Sbjct: 310 KTLPLVMDGKDVVAMARTGSGKTAAFLIPMFE 341
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 32.7 bits (71), Expect = 0.14
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQI 318
F + P L + + E + P+ +Q +A+PL G D++ A++ +GKT F + L+
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALEN 74
Query: 319 V 321
V
Sbjct: 75 V 75
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 30.7 bits (66), Expect = 0.55
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 199 LPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQIVWET 330
+PT +Q P +L G DV A SGK A+ LPI+ + E+
Sbjct: 209 VPTSLQKHMWPSLLRGRDVAGVAIEGSGKRLAYLLPIIHQITES 252
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 30.3 bits (65), Expect = 0.73
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQI 318
F +F + + +E+ +QA I G DV+ A T +GKT +F LP+++
Sbjct: 75 FSKFRISQKTIDNLEDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEK 134
Query: 319 VWETLKDMQEGK 354
+ + + G+
Sbjct: 135 LQDGKLSQKRGR 146
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 30.3 bits (65), Expect = 0.73
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1
Query: 151 GVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET 273
GV ++ +++ + PT +QA+A+P+I+ G D++ T
Sbjct: 111 GVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMT 151
>SB_18011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -2
Query: 395 IVHSVEICCIPSLVFPSCISFKVSQTIC--SIGKQ 297
I + CC+ +VF SC+S K T C ++GK+
Sbjct: 2 ISQKMSFCCVAFVVFLSCVSVKGQFTACMGNLGKR 36
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 235 ILGGGDVLMAAET*SGKTGAFCLPILQIVWETLKD 339
+L DV+ A++ +GKT F + ILQ + KD
Sbjct: 119 VLSARDVIAQAQSGTGKTATFAISILQEIDTNYKD 153
>SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -2
Query: 293 APVLP--LHVSAAIRTSPPPNIRGT 225
APV P ++ S A R +PPPN RGT
Sbjct: 398 APVQPSGINQSPASRPTPPPNKRGT 422
>SB_58407| Best HMM Match : TNFR_c6 (HMM E-Value=3.5e-05)
Length = 511
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 269 SAAIRTSPPPNIRGTASA*TSVGRFQSISSIALPSSGRTPNSSKAV 132
S A+ +S PP + SVG Q+ SI+L + N +++V
Sbjct: 163 STAVTSSTPPTSTSMQTTKHSVGHLQTTVSISLKKETKPKNETESV 208
>SB_53316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/58 (20%), Positives = 35/58 (60%)
Frame = +1
Query: 49 QVPTPLFYFHNRLLSNLSNYLVTENHTMTAFEEFGVLPELGKAIEEMDWNLPTDVQAE 222
++P + +F R++ N + YLV +++ + + ++ E+ +A+ ++ LP+ +++E
Sbjct: 10 EIPMIIIFFEIRVIINNAPYLVVDDYILISHQQ-----EIEEALSKVCGYLPSSIRSE 62
>SB_46138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -2
Query: 311 SIGKQKAPVLPLHVSAAIRTSP--PPNIRGTASA*TSVGRFQSISSIALPSSGR 156
S+GK K+PV+P+ + +SP P + S + R +S ++ A+ +S R
Sbjct: 215 SVGKPKSPVVPMPTHGQLSSSPTSPSALNTLGSTKKTHHRSKSDATAAIVASSR 268
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 26.6 bits (56), Expect = 8.9
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 160 PELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLP 306
PE+ KA+ ++ ++ Q +AV IL G L+ T +GK+ + LP
Sbjct: 511 PEVYKALGQLGFSSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLP 559
>SB_46186| Best HMM Match : zf-RanBP (HMM E-Value=0.45)
Length = 339
Score = 26.6 bits (56), Expect = 8.9
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 405 QKRHCPLSGNLLYSVS-CFPLLHIFQSLPNNLQ-YRQTESTRL 283
QK CPL GN L S+S C+ H + +L+ R+T R+
Sbjct: 293 QKNACPLDGNCLQSISICYLPSHCNKKGQQHLRNLRRTNRERI 335
>SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19)
Length = 1562
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -1
Query: 390 PLSGNLLYSVSCFPLLHIFQSLPNNLQYRQTESTRLTASCFGCHKNITS 244
PLSG L +S FPL + + +L+++++ + R C+ H +T+
Sbjct: 715 PLSG-LRTCISVFPLRSDWNRIRFSLRFQRSFALRFAWPCYAQHAYVTT 762
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,554,557
Number of Sequences: 59808
Number of extensions: 273375
Number of successful extensions: 861
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 847047381
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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