Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I11
(438 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 110 4e-25
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 57 5e-09
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 56 9e-09
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 54 6e-08
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 53 8e-08
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 53 8e-08
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 53 1e-07
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 52 1e-07
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 52 1e-07
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 52 2e-07
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 50 6e-07
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 50 6e-07
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 50 6e-07
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 50 6e-07
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 50 7e-07
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 47 7e-06
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 46 9e-06
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 46 9e-06
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 46 9e-06
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 1e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 46 2e-05
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 46 2e-05
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 45 2e-05
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 45 2e-05
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 45 2e-05
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 44 5e-05
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 44 6e-05
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 44 6e-05
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 44 6e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 43 1e-04
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 43 1e-04
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 43 1e-04
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 42 1e-04
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 40 6e-04
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 40 8e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 38 0.002
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 35 0.030
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 35 0.030
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 33 0.12
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 33 0.12
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 32 0.16
Z77658-1|CAB01158.1| 98|Caenorhabditis elegans Hypothetical pr... 30 0.64
Z82260-8|CAB05136.1| 361|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z82260-7|CAB05135.1| 369|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z81147-5|CAB03534.1| 663|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z68215-3|CAA92452.3| 415|Caenorhabditis elegans Hypothetical pr... 29 1.5
U64843-13|AAF98228.1| 355|Caenorhabditis elegans Hypothetical p... 29 2.0
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 28 2.6
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 28 2.6
Z68104-1|CAA92112.1| 866|Caenorhabditis elegans Hypothetical pr... 27 6.0
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 27 6.0
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 27 7.9
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 27 7.9
AL021479-4|CAA16319.1| 301|Caenorhabditis elegans Hypothetical ... 27 7.9
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 110 bits (265), Expect = 4e-25
Identities = 52/100 (52%), Positives = 69/100 (69%)
Frame = +1
Query: 130 MTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPI 309
MTAFEEFG++PEL A+ ++W LPT VQ+EA+P ILGG D L+AAET SGKTGAF LPI
Sbjct: 1 MTAFEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPI 60
Query: 310 LQIVWETLKDMQEGKTRDGIQQISTEWTMSFLDRTTALAV 429
QIVWE K ++ + + S E+ ++ DR +L +
Sbjct: 61 AQIVWERRKSAEKSQNSGQKPENSREFQLNREDRDVSLQI 100
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 57.2 bits (132), Expect = 5e-09
Identities = 28/60 (46%), Positives = 37/60 (61%)
Frame = +1
Query: 136 AFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQ 315
+F E GV L A + + W P+ +Q A+P L G DV+ AET SGKTGAF +P+LQ
Sbjct: 45 SFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQ 104
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 56.4 bits (130), Expect = 9e-09
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQI 318
+EE G E+ +A++E+ + PT +Q +A+P+ L DV+ AET SGKT AF LP+L
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLL-- 360
Query: 319 VWET-LKDMQEGKTRD 363
VW T L M+ + RD
Sbjct: 361 VWITSLPKMERQEHRD 376
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 53.6 bits (123), Expect = 6e-08
Identities = 24/69 (34%), Positives = 42/69 (60%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQI 318
FE+F + +L I E W P+ +Q ++ + L G D+L A+ +GKTGA+C+P+++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 319 VWETLKDMQ 345
+ LK +Q
Sbjct: 105 IQPALKAIQ 113
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 53.2 bits (122), Expect = 8e-08
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQ 315
+++ G+ + KAIE+ +N PT +Q + +P I+ G DV+ + T SGKT AF +P+LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 53.2 bits (122), Expect = 8e-08
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQ 315
+++ G+ + KAIE+ +N PT +Q + +P I+ G DV+ + T SGKT AF +P+LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 52.8 bits (121), Expect = 1e-07
Identities = 31/80 (38%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Frame = +1
Query: 130 MTAFEEFGVLP-ELGKAIEEMDWNLPTDVQAEAVPL-ILGGGDVLMAAET*SGKTGAFCL 303
++A+++F LP E+ +AIE+M ++ PT++Q+ +P + DVL AAET SGKT AF +
Sbjct: 153 ISAWKQFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGI 212
Query: 304 PILQIVWETLKDMQEGKTRD 363
P++ + E+ D QE ++ +
Sbjct: 213 PLVARLLESSDDSQETESTE 232
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 52.4 bits (120), Expect = 1e-07
Identities = 27/66 (40%), Positives = 37/66 (56%)
Frame = +1
Query: 118 ENHTMTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAF 297
+N T F + GV + + ++ M T VQA +P IL G D+L A T +GKT AF
Sbjct: 84 DNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAF 143
Query: 298 CLPILQ 315
+PILQ
Sbjct: 144 AIPILQ 149
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 52.4 bits (120), Expect = 1e-07
Identities = 27/66 (40%), Positives = 37/66 (56%)
Frame = +1
Query: 118 ENHTMTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAF 297
+N T F + GV + + ++ M T VQA +P IL G D+L A T +GKT AF
Sbjct: 84 DNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAF 143
Query: 298 CLPILQ 315
+PILQ
Sbjct: 144 AIPILQ 149
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 51.6 bits (118), Expect = 2e-07
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = +1
Query: 109 LVTENHTMTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKT 288
L + T FE+F + + +++ D+ PT++Q + + L G DV+ AA+T SGKT
Sbjct: 68 LKKSSRTFLRFEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKT 127
Query: 289 GAFCLPILQIVW 324
A +P+L+ +W
Sbjct: 128 LALVIPVLEALW 139
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 50.4 bits (115), Expect = 6e-07
Identities = 24/67 (35%), Positives = 45/67 (67%)
Frame = +1
Query: 151 GVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQIVWET 330
GV ++ +++ +++ PT +QA+A+P I+ G DV+ A+T SGKT AF LP+ + + +
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 331 LKDMQEG 351
+++EG
Sbjct: 370 -PELEEG 375
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 50.4 bits (115), Expect = 6e-07
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQI 318
F E G P + + + ++ PT VQ ++P +L D++ A+T SGKT AF LPI+Q
Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200
Query: 319 VWETLKDM 342
+ DM
Sbjct: 201 ILAGGPDM 208
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 50.4 bits (115), Expect = 6e-07
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQI 318
F E G P + + + ++ PT VQ ++P +L D++ A+T SGKT AF LPI+Q
Sbjct: 125 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 184
Query: 319 VWETLKDM 342
+ DM
Sbjct: 185 ILAGGPDM 192
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 50.4 bits (115), Expect = 6e-07
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQI 318
F E G P + + + ++ PT VQ ++P +L D++ A+T SGKT AF LPI+Q
Sbjct: 122 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 181
Query: 319 VWETLKDM 342
+ DM
Sbjct: 182 ILAGGPDM 189
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 50.0 bits (114), Expect = 7e-07
Identities = 28/76 (36%), Positives = 41/76 (53%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQI 318
F +FG+ + K+I E+ W VQ + L L +++ A T SGKTGAF +P++Q
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQ- 149
Query: 319 VWETLKDMQEGKTRDG 366
K + E KT DG
Sbjct: 150 -----KLIAESKTNDG 160
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 46.8 bits (106), Expect = 7e-06
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Frame = +1
Query: 112 VTENHTMTAFE--EFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGK 285
V+E T T F E V L KA++ + + T++QA+++ +L G DVL +A+T SGK
Sbjct: 59 VSEFLTKTTFASLEGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGK 118
Query: 286 TGAFCLPILQIV 321
T AF LP ++++
Sbjct: 119 TLAFLLPAIELL 130
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 46.4 bits (105), Expect = 9e-06
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +1
Query: 130 MTAFEEFGVLPE-LGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLP 306
M +F+ F +LP+ L ++ M N PT +Q + I+ G DV+ A T SGKT AF +P
Sbjct: 734 MASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIP 793
Query: 307 -ILQIVWETLKD 339
+++++ E KD
Sbjct: 794 FVIKLMEEFEKD 805
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 46.4 bits (105), Expect = 9e-06
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +1
Query: 130 MTAFEEFGVLPE-LGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLP 306
M +F+ F +LP+ L ++ M N PT +Q + I+ G DV+ A T SGKT AF +P
Sbjct: 734 MASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIP 793
Query: 307 -ILQIVWETLKD 339
+++++ E KD
Sbjct: 794 FVIKLMEEFEKD 805
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 46.4 bits (105), Expect = 9e-06
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +1
Query: 136 AFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQ 315
+FE+ + ++ KA ++ PT +Q +P+ L G D+ A T +GKT AF LPIL+
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILE 208
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 46.0 bits (104), Expect = 1e-05
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +1
Query: 136 AFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQ 315
+F F L +AI + ++ PT +QA A+P L G DVL A+T SGKT A+ P +
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIV 325
Query: 316 IVWETLKDMQEGK 354
+ + D++ G+
Sbjct: 326 HIMDQ-PDLKAGE 337
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +1
Query: 130 MTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPI 309
+T++ G+ P + + ++ + +N +Q +P +L G DVL AET +GKT AF LPI
Sbjct: 380 LTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPI 439
Query: 310 L 312
+
Sbjct: 440 I 440
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 136 AFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPIL- 312
+F + + + + +E + T +Q +PL+ G D+L A+T SGKT AF LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 313 QIVWETLKDMQEG 351
+++ E KD+ G
Sbjct: 359 RLILE--KDLNYG 369
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 136 AFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPIL- 312
+F + + + + +E + T +Q +PL+ G D+L A+T SGKT AF LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 313 QIVWETLKDMQEG 351
+++ E KD+ G
Sbjct: 359 RLILE--KDLNYG 369
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 45.2 bits (102), Expect = 2e-05
Identities = 22/65 (33%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Frame = +1
Query: 124 HTMTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLIL--GGGDVLMAAET*SGKTGAF 297
+++++F E + PE+ KA++ M++ PT +Q A+PL+L +++ A++ +GKT AF
Sbjct: 206 YSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAF 265
Query: 298 CLPIL 312
L +L
Sbjct: 266 VLTML 270
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 45.2 bits (102), Expect = 2e-05
Identities = 22/65 (33%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Frame = +1
Query: 124 HTMTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLIL--GGGDVLMAAET*SGKTGAF 297
+++++F E + PE+ KA++ M++ PT +Q A+PL+L +++ A++ +GKT AF
Sbjct: 231 YSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAF 290
Query: 298 CLPIL 312
L +L
Sbjct: 291 VLTML 295
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 45.2 bits (102), Expect = 2e-05
Identities = 22/65 (33%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Frame = +1
Query: 124 HTMTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLIL--GGGDVLMAAET*SGKTGAF 297
+++++F E + PE+ KA++ M++ PT +Q A+PL+L +++ A++ +GKT AF
Sbjct: 615 YSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAF 674
Query: 298 CLPIL 312
L +L
Sbjct: 675 VLTML 679
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 44.0 bits (99), Expect = 5e-05
Identities = 22/76 (28%), Positives = 42/76 (55%)
Frame = +1
Query: 118 ENHTMTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAF 297
E + + F++ G+ +L + I + P+ +Q AVP IL DV+ A++ +GKT F
Sbjct: 21 EVNVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATF 80
Query: 298 CLPILQIVWETLKDMQ 345
+ +LQ + +++ Q
Sbjct: 81 SISVLQSLDTQVRETQ 96
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 43.6 bits (98), Expect = 6e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPIL 312
F E + + K + ++ T +Q A+PL+ G D++ A+T SGKT AF LPI+
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 43.6 bits (98), Expect = 6e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPIL 312
F E + + K + ++ T +Q A+PL+ G D++ A+T SGKT AF LPI+
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 43.6 bits (98), Expect = 6e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPIL 312
F E + + K + ++ T +Q A+PL+ G D++ A+T SGKT AF LPI+
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +1
Query: 127 TMTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLP 306
T F E + + K + + T +Q +PLI G D++ A+T SGKT AF LP
Sbjct: 550 TCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLP 609
Query: 307 IL 312
I+
Sbjct: 610 IM 611
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +1
Query: 127 TMTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLP 306
T F E + + K + + T +Q +PLI G D++ A+T SGKT AF LP
Sbjct: 550 TCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLP 609
Query: 307 IL 312
I+
Sbjct: 610 IM 611
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +1
Query: 127 TMTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLP 306
T F E + + K + + T +Q +PLI G D++ A+T SGKT AF LP
Sbjct: 550 TCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLP 609
Query: 307 IL 312
I+
Sbjct: 610 IM 611
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 42.3 bits (95), Expect = 1e-04
Identities = 20/69 (28%), Positives = 39/69 (56%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQI 318
F++ G+ +L + I + P+ +Q A+P IL DV+ A++ +GKT F + +LQ
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 319 VWETLKDMQ 345
+ +++ Q
Sbjct: 88 LDTQVRETQ 96
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 40.3 bits (90), Expect = 6e-04
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQI 318
F + + P L + E P+ +Q +++P + +VL +A T SGKT AF LP++
Sbjct: 128 FSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDE 187
Query: 319 VWE 327
+ E
Sbjct: 188 ILE 190
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 39.9 bits (89), Expect = 8e-04
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 130 MTAFEE-FGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLP 306
+ +FE+ FG + I + + P+ +Q++ PL+L G D + ++T SGKT AF LP
Sbjct: 82 VNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLP 141
Query: 307 IL 312
L
Sbjct: 142 AL 143
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +1
Query: 202 PTDVQAEAVPL-ILGGGDVLMAAET*SGKTGAFCLPILQIVWETLKDMQEGKTRD 363
PT++Q+ +P + DVL AAET SGKT AF +P++ + E+ D QE ++ +
Sbjct: 11 PTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTE 65
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 202 PTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQIVWE 327
PT +Q + +P+ L G D++ A T SGKT F LP++ E
Sbjct: 213 PTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLE 254
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 34.7 bits (76), Expect = 0.030
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +1
Query: 121 NHTMTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFC 300
+ + +F++ + EL + I + P+ +Q A+ G DV+ A++ +GKT F
Sbjct: 25 DQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFS 84
Query: 301 LPILQ 315
+ ILQ
Sbjct: 85 VSILQ 89
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 34.7 bits (76), Expect = 0.030
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +1
Query: 121 NHTMTAFEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFC 300
+ + +F++ + EL + I + P+ +Q A+ G DV+ A++ +GKT F
Sbjct: 25 DQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFS 84
Query: 301 LPILQ 315
+ ILQ
Sbjct: 85 VSILQ 89
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 32.7 bits (71), Expect = 0.12
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAF 297
FE + + + ++ ++ P+ VQA A+P+ L G D+L+ A++ +GKT F
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF 76
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 32.7 bits (71), Expect = 0.12
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 139 FEEFGVLPELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAF 297
FE + + + ++ ++ P+ VQA A+P+ L G D+L+ A++ +GKT F
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF 76
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 32.3 bits (70), Expect = 0.16
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +1
Query: 160 PELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQIV 321
PEL + ++ + TDVQ + +L DV++ + T SGKT AF LP+++++
Sbjct: 19 PELLEVFDK-SYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMI 71
>Z77658-1|CAB01158.1| 98|Caenorhabditis elegans Hypothetical
protein F14D7.1 protein.
Length = 98
Score = 30.3 bits (65), Expect = 0.64
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 422 NAVVRSKNDIVHSVEICCIPSLVFPSCISF-KVSQTICSI 306
N ++ S++ H VE CCI +LVF F ++ + CS+
Sbjct: 59 NLLIVSEDSHFHRVENCCIATLVFYHAHDFIRIEEVSCSL 98
>Z82260-8|CAB05136.1| 361|Caenorhabditis elegans Hypothetical
protein C32H11.10 protein.
Length = 361
Score = 29.9 bits (64), Expect = 0.85
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = +1
Query: 4 RGLPPYCHPVQLCCHQVPTPLFY-----FHNRLLSNLSNYLVTENHTM 132
+GL P P Q+C V P Y F+ R S L Y+V NH M
Sbjct: 46 KGLTPRALPNQVCFFTVNVPKGYFATVTFNKRFNSTLGAYMVYSNHKM 93
>Z82260-7|CAB05135.1| 369|Caenorhabditis elegans Hypothetical
protein C32H11.9 protein.
Length = 369
Score = 29.9 bits (64), Expect = 0.85
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = +1
Query: 4 RGLPPYCHPVQLCCHQVPTPLFY-----FHNRLLSNLSNYLVTENHTM 132
+GL P P Q+C V P Y F+ R S L Y+V NH M
Sbjct: 54 KGLTPRALPNQVCFFTVNVPKGYFATVTFNKRFNSTLGAYMVYSNHKM 101
>Z81147-5|CAB03534.1| 663|Caenorhabditis elegans Hypothetical
protein T09E11.7 protein.
Length = 663
Score = 29.5 bits (63), Expect = 1.1
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 91 SNLSNYLVTENHTMTAFEEFGVLPELGKAIEEMDWNLPTDVQAE-AVPLILGGGDVLMAA 267
S L T N T FE++ + +L I W+L +VQ VP++ GDVL
Sbjct: 108 SALRALFFTSNRKKTGFEDYFEMLDLAVDIFTHTWSLSVEVQFYLIVPVVFMIGDVLSGN 167
Query: 268 ET*SGKTGAFCLPIL 312
+ G A CL L
Sbjct: 168 KQ-LGYYYALCLSSL 181
>Z68215-3|CAA92452.3| 415|Caenorhabditis elegans Hypothetical
protein C53B4.3 protein.
Length = 415
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -2
Query: 386 SVEICCIPSLVFPSCISFKVSQTICSIGKQKAPVLPLHVSAAIRTSPPPNI 234
S +C +PSLV +CI K + S P ++++ +R P +
Sbjct: 177 SAALCALPSLVLETCIEKKSYEHEISTDNANGPPPQINITNVVRILQKPGV 227
>U64843-13|AAF98228.1| 355|Caenorhabditis elegans Hypothetical
protein K06C4.8 protein.
Length = 355
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 236 Y*VEVMFLWQPKHEAVRRVLSVCLYCRLFGRL*KICKRGKQETEYNR 376
Y F++ E R VLS C+ CR L + RG+Q T+ R
Sbjct: 295 YSASTFFIYLIFSEKYRNVLSTCVTCRNTDEL-TVSSRGRQNTKTTR 340
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 393 CPLSGNLLYSVS-CFPLLHIFQSLPNNLQYRQTESTRLTASCFG 265
C ++Y++ C L IFQ+L N L + T + RL CFG
Sbjct: 761 CTAMAAVMYALLLCSLFLTIFQALRNILVFLPTPAYRLLNICFG 804
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 393 CPLSGNLLYSVS-CFPLLHIFQSLPNNLQYRQTESTRLTASCFG 265
C ++Y++ C L IFQ+L N L + T + RL CFG
Sbjct: 743 CTAMAAVMYALLLCSLFLTIFQALRNILVFLPTPAYRLLNICFG 786
>Z68104-1|CAA92112.1| 866|Caenorhabditis elegans Hypothetical
protein F08B12.1 protein.
Length = 866
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 397 TLSTQWKSVVFRLLFSPLAYLSKSPKQS 314
T+STQ + V F L+S ++Y+S PK++
Sbjct: 393 TISTQLRKVTFEALYSTVSYVS-DPKKT 419
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 27.1 bits (57), Expect = 6.0
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 163 ELGKAIEEMDWNLPTDVQAEAVPLILGGGDVLMAAET*SGKTGAFCLPILQ 315
EL + I + P+ +Q AV G DV + ++ SGKT + ILQ
Sbjct: 6 ELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQ 56
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 26.6 bits (56), Expect = 7.9
Identities = 13/56 (23%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Frame = -2
Query: 311 SIGKQKAPVLP-----LHVSAAIRTSPPPNIRGTASA*T-SVGRFQSISSIALPSS 162
++G+ + ++P +H+ ++T+P P+ GT++ T + F+S+S+ ++P++
Sbjct: 565 NLGEHEGQIVPGSDKVIHIGPTVKTTPTPS-SGTSTIVTENSSTFESVSTSSVPTT 619
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 26.6 bits (56), Expect = 7.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 250 DVLMAAET*SGKTGAFCLPILQIV 321
DV +AA T SGKT + LP+L V
Sbjct: 158 DVAIAAPTGSGKTICYVLPVLAAV 181
>AL021479-4|CAA16319.1| 301|Caenorhabditis elegans Hypothetical
protein Y22F5A.6 protein.
Length = 301
Score = 26.6 bits (56), Expect = 7.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 142 EEFGVLPELGKAIEEMDWNLPTDVQAEAVP 231
E FG+L ++ + + + D+N+P A A+P
Sbjct: 26 EPFGLLQKVSEQVIDPDYNIPEVKDAPAIP 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,006,472
Number of Sequences: 27780
Number of extensions: 204102
Number of successful extensions: 675
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -