Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I10
         (590 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    24   0.84 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   0.84 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   0.84 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   0.84 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   0.84 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   5.9  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 481 WWRPRYVVINTFFFNSLLS 425
           W R RY+++  +FF++L S
Sbjct: 136 WKRARYLILAAWFFSALYS 154


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 569  IVQFLVLLFSRMAMVAHCHKGVKIPDQLNLVETK 468
            ++QF+ +LF R   +AH    +    +LNL  TK
Sbjct: 1339 VIQFVAMLFHRFGTIAH----ILASTELNLCCTK 1368



 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 564  SIPCSSIFTNGH 529
            SIP   +F NGH
Sbjct: 1513 SIPAKDVFENGH 1524


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 569  IVQFLVLLFSRMAMVAHCHKGVKIPDQLNLVETK 468
            ++QF+ +LF R   +AH    +    +LNL  TK
Sbjct: 1339 VIQFVAMLFHRFGTIAH----ILASTELNLCCTK 1368



 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 564  SIPCSSIFTNGH 529
            SIP   +F NGH
Sbjct: 1513 SIPAKDVFENGH 1524


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 569  IVQFLVLLFSRMAMVAHCHKGVKIPDQLNLVETK 468
            ++QF+ +LF R   +AH    +    +LNL  TK
Sbjct: 1339 VIQFVAMLFHRFGTIAH----ILASTELNLCCTK 1368



 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 564  SIPCSSIFTNGH 529
            SIP   +F NGH
Sbjct: 1513 SIPAKDVFENGH 1524


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 569  IVQFLVLLFSRMAMVAHCHKGVKIPDQLNLVETK 468
            ++QF+ +LF R   +AH    +    +LNL  TK
Sbjct: 1339 VIQFVAMLFHRFGTIAH----ILASTELNLCCTK 1368



 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 564  SIPCSSIFTNGH 529
            SIP   +F NGH
Sbjct: 1513 SIPAKDVFENGH 1524


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 416 IFATEKRIKEERIDYNISWSPPDSADQESSL 508
           IF     +KE   D  I WSP +    E +L
Sbjct: 166 IFLQNLILKENTYDAVIKWSPNEDYSCEYNL 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,926
Number of Sequences: 336
Number of extensions: 2579
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)