Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I09
         (266 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D570ED Cluster: PREDICTED: similar to CG1155-PA;...    35   0.31 

>UniRef50_UPI0000D570ED Cluster: PREDICTED: similar to CG1155-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG1155-PA - Tribolium castaneum
          Length = 245

 Score = 35.1 bits (77), Expect = 0.31
 Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +2

Query: 20  LNVKFEPGELREAARTFEEARGKIKK-YTPFXXXXXXXXXXXXXXXFGGLTLLVTKAL 190
           L +K      +  AR+FEEARGK+KK                    FGGL LL TKAL
Sbjct: 102 LQIKLPLQVPQNLARSFEEARGKVKKTMGGLILGLGTRMMSMIPVMFGGLVLLTTKAL 159


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,158,795
Number of Sequences: 1657284
Number of extensions: 2340098
Number of successful extensions: 4609
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4605
length of database: 575,637,011
effective HSP length: 66
effective length of database: 466,256,267
effective search space used: 10257637874
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)