Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I09
         (266 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    20   4.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   5.3  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    19   7.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    19   7.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    19   7.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     19   9.3  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 35  EPGELREAARTFEEARGKIKKYT 103
           E  + +E  R   E+RG + K+T
Sbjct: 256 EAPQRKELLRFASESRGSVAKFT 278


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 44  RQARISH*VCFRPR 3
           R  R  + VCFRPR
Sbjct: 395 RNNRDEYNVCFRPR 408


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 19.4 bits (38), Expect = 7.0
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 155 FGGLTLLVTKALCGC*AGVPCSCGFRSSEAIERR 256
           F  + LLV    C     V C C  ++S  I RR
Sbjct: 280 FKEIGLLVDSTYCLFLLFVFCDCSHQASLNIARR 313


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 19.4 bits (38), Expect = 7.0
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 155 FGGLTLLVTKALCGC*AGVPCSCGFRSSEAIERR 256
           F  + LLV    C     V C C  ++S  I RR
Sbjct: 280 FKEIGLLVDSTYCLFLLFVFCDCSHQASLNIARR 313


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 19.4 bits (38), Expect = 7.0
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 155 FGGLTLLVTKALCGC*AGVPCSCGFRSSEAIERR 256
           F  + LLV    C     V C C  ++S  I RR
Sbjct: 280 FKEIGLLVDSTYCLFLLFVFCDCSHQASLNIARR 313


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 37  LEFHIEFVFALV 2
           +EFH+E   ALV
Sbjct: 606 IEFHVEVGMALV 617


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,635
Number of Sequences: 336
Number of extensions: 550
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4378513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)