Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I09
         (266 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            22   4.5  
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    21   5.9  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    21   5.9  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 23   NVKFEPGELREAARTFEEARGKI 91
            +++F P  +  AA  +E ARG +
Sbjct: 1478 HIRFSPLSMPFAANIYEPARGSV 1500


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 227 SRSCKERQLSNH 192
           S  CKER+ +NH
Sbjct: 47  STKCKEREAANH 58


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 7   GRKQTQCEIRAWRT 48
           GR+  +C+ R W+T
Sbjct: 297 GRQHDRCDSRRWKT 310


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,717
Number of Sequences: 2352
Number of extensions: 2062
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 14857014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)