Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I08
         (481 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   1.9  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   1.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   4.5  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   4.5  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   5.9  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 171 LDVTYDFPLSGGGERVAPLSEDLHE 97
           LDV +++PL G       L  DL E
Sbjct: 138 LDVDWEYPLEGDRANFITLLSDLKE 162


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 388 DVDIRKDLYANTVMSGGTTMYPGI 459
           D D+ KD     V+ GG+T  P I
Sbjct: 150 DADMTKDQIDEIVLVGGSTRIPKI 173


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +3

Query: 312 SLPALVL--GYGIVRHPRDRLQLDH 380
           +LP L+L  GY I+   +D   LDH
Sbjct: 467 NLPTLLLELGYRIIVSTKDAWYLDH 491


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 214 ATAAASTSLEKSYELP 261
           A AAAS S++ SY++P
Sbjct: 178 AVAAASGSVDISYDVP 193


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 165 VTYDFPLSGGG 133
           +TYDF + GGG
Sbjct: 202 MTYDFHIPGGG 212


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,873
Number of Sequences: 336
Number of extensions: 2124
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)