Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I08
(481 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 318 2e-87
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 317 3e-87
SB_56| Best HMM Match : Actin (HMM E-Value=0) 317 3e-87
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 316 6e-87
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 315 1e-86
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 246 6e-66
SB_54| Best HMM Match : Actin (HMM E-Value=0) 193 7e-50
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 181 2e-46
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 155 2e-38
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 136 7e-33
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 89 2e-18
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 74 7e-14
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 57 7e-09
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 40 0.001
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_30638| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 28 3.5
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 4.6
SB_44983| Best HMM Match : Death (HMM E-Value=4.8e-09) 27 6.1
SB_24692| Best HMM Match : Disintegrin (HMM E-Value=7.6e-23) 27 6.1
SB_15750| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_22886| Best HMM Match : LRR_1 (HMM E-Value=2e-06) 27 8.0
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 318 bits (780), Expect = 2e-87
Identities = 148/157 (94%), Positives = 154/157 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 123 THTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 182
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET Y
Sbjct: 183 ALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTY 242
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
NSIMKCDVDIRKDLYANTV+SGGTTMYPGIADRMQKE
Sbjct: 243 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 279
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 317 bits (779), Expect = 3e-87
Identities = 148/157 (94%), Positives = 154/157 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTY 280
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
NSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKE
Sbjct: 281 NSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKE 317
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 317 bits (778), Expect = 3e-87
Identities = 148/157 (94%), Positives = 154/157 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 160 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 219
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET Y
Sbjct: 220 ALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTY 279
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
NSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKE
Sbjct: 280 NSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKE 316
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 316 bits (776), Expect = 6e-87
Identities = 147/157 (93%), Positives = 154/157 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTY 280
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
NSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKE
Sbjct: 281 NSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKE 317
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 315 bits (773), Expect = 1e-86
Identities = 148/157 (94%), Positives = 154/157 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YV
Sbjct: 160 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYV 219
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAAAS+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET Y
Sbjct: 220 ALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTY 279
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
NSIMKCDVDIRKDLYANTV+SGG+TM+PGIADRMQKE
Sbjct: 280 NSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKE 316
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 246 bits (603), Expect = 6e-66
Identities = 116/133 (87%), Positives = 122/133 (91%)
Frame = +1
Query: 82 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP 261
D + + I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+S+EKSYELP
Sbjct: 158 DGVSHTVPIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELP 217
Query: 262 DGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGT 441
DGQVITIGNERFRCPEAL QPSFLGMES GIHET YNSIMKCDVDIRKDLYANTVMSGGT
Sbjct: 218 DGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGT 277
Query: 442 TMYPGIADRMQKE 480
TMYPG+ADRMQKE
Sbjct: 278 TMYPGLADRMQKE 290
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 193 bits (470), Expect = 7e-50
Identities = 85/142 (59%), Positives = 110/142 (77%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
SHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +TAE++I+RD+KE LCY
Sbjct: 2205 SHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQSTAEQQIIRDLKETLCYC 2264
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
A+D+E+E+ A S E Y LPDGQ I IG+ERFR E LFQPS LG + GIHE+++
Sbjct: 2265 AMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIF 2324
Query: 370 NSIMKCDVDIRKDLYANTVMSG 435
SI KCD+D+R +L+ N V+SG
Sbjct: 2325 KSIKKCDIDLRAELFHNIVLSG 2346
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 181 bits (441), Expect = 2e-46
Identities = 78/157 (49%), Positives = 110/157 (70%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F TA+ E VR +KEKLCYV
Sbjct: 164 THICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYV 223
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
+ EQE A +T L + Y LPDG+V+ + ERF PEALFQP + +E G+ E ++
Sbjct: 224 GYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLF 283
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
N+I D+D R + Y + V+SGG+TMYPG+ R+++E
Sbjct: 284 NTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERE 320
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 155 bits (376), Expect = 2e-38
Identities = 69/86 (80%), Positives = 79/86 (91%)
Frame = +1
Query: 223 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 402
A S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGME+ GIHE +YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 403 KDLYANTVMSGGTTMYPGIADRMQKE 480
KDLY+N V+SGG+TM+PGIADRMQKE
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQKE 90
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 136 bits (330), Expect = 7e-33
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
SH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 39 SHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYV 98
Query: 190 ALDFEQEM 213
ALDF QE+
Sbjct: 99 ALDFYQEI 106
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 88.6 bits (210), Expect = 2e-18
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = +1
Query: 25 IYEGYALPHAILRLDLAGRDLTDYLMKILTE-RGYSFTTTAEREIVRDIKEKLCYVALDF 201
IYEG+ L H + L++ G LT+ L + L + RG++FT+++ +IV DIKEK+CY++ D
Sbjct: 795 IYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGHNFTSSSGWQIVNDIKEKICYLSKDH 854
Query: 202 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 333
+E+ + L K Y LPDGQ+I+IG E E LF+P L
Sbjct: 855 LKEVHNYKTNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 73.7 bits (173), Expect = 7e-14
Identities = 31/56 (55%), Positives = 46/56 (82%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 177
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +1
Query: 352 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 456
I E + +I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 57.2 bits (132), Expect = 7e-09
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 274 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 450
+ + ERF PE F P F + + + E V N I C +D+R+ LY N V+SGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 451 PGIADRMQKE 480
R+Q++
Sbjct: 256 RDFGRRLQRD 265
Score = 51.2 bits (117), Expect = 4e-07
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+H +P+ EGY + I + +AGRD+T ++ ++L ER E + IKE+ Y+
Sbjct: 73 THVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLREREMGIPPEQSMETAKTIKERWGYI 132
Query: 190 ALDFEQEMA 216
D +E A
Sbjct: 133 CPDIAKEFA 141
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +1
Query: 334 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
G + G+ + V S+ D+DIR L+ + +++GG T+ G +R+ +E
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRE 194
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 1 ARGSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 117
A + VP+++GY L AI+R LAG +T ++ E
Sbjct: 90 ATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 340 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
E + + +S++ C +D RK L N V+ GGT M PG R+ +E
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQE 100
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 32.7 bits (71), Expect = 0.16
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 304 PEALFQPSFLGMESCGIHETV 366
PE +FQPS LG+E GI ET+
Sbjct: 3 PEIIFQPSMLGLEQAGITETM 23
>SB_30638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 31.1 bits (67), Expect = 0.49
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 478 PSASCRR-YRGTWWYHQT*QCWRTGPY 401
P+ +C R Y+G WWY+Q C G Y
Sbjct: 256 PTKNCARAYQGAWWYNQCHMCNPNGLY 282
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +1
Query: 145 EREIVRDIKEKLCYVALDFEQEMATA---AASTSLEKSYELPD 264
E ++ +KE CYV+ F ++M A ++ + Y LPD
Sbjct: 392 ETFVINQVKEDTCYVSSQFYKDMEIARQRGKENTIVREYVLPD 434
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 169 KEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPE 309
+EK+ L+ E E A + LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_44983| Best HMM Match : Death (HMM E-Value=4.8e-09)
Length = 868
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = -2
Query: 432 RHDSVGVQVLTDVNVALHDRVVDGLVDAARFHTQERGLEESFG--ATEPLVTDGDH 271
RHD+V + + +V D H ++ GL+E+F EP +G H
Sbjct: 144 RHDAVKILEEAQIKTPTQGGMVLDAYDIGEHHLEDNGLDETFDKPEDEPSEDEGAH 199
>SB_24692| Best HMM Match : Disintegrin (HMM E-Value=7.6e-23)
Length = 1592
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 67 PDGGWRGAGRNLRRWARCES 8
P+GG GAG LR W C+S
Sbjct: 1436 PNGGSPGAGVKLRLWPGCQS 1455
>SB_15750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -3
Query: 257 SSYDFSREVEAAAVAISCSKSRAT*QSFSLMSRTISLSAVVVNE 126
SSY F+ + V I+ +S T ++FSL +T + SAV N+
Sbjct: 118 SSYTFNENI--GTVTINLKRSSTTFEAFSLELQTTNRSAVQGND 159
>SB_22886| Best HMM Match : LRR_1 (HMM E-Value=2e-06)
Length = 583
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/70 (20%), Positives = 33/70 (47%)
Frame = +1
Query: 49 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAA 228
H I LD+ G ++ + + GY T++ + + K ++ Y AL + + + +
Sbjct: 102 HNITELDICGTEIPFSELFASSLEGYECTSSLRKLNISHAKGEIDYAALGYFKNLTSLDV 161
Query: 229 STSLEKSYEL 258
S ++ ++L
Sbjct: 162 SHNMFSDFDL 171
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,283,569
Number of Sequences: 59808
Number of extensions: 295716
Number of successful extensions: 931
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1001731762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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