Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I08
(481 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 320 4e-88
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 320 4e-88
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 320 4e-88
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 320 4e-88
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 320 4e-88
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 320 4e-88
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 319 8e-88
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 319 8e-88
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 319 8e-88
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 319 8e-88
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 298 2e-81
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 184 3e-47
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 160 4e-40
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 100 1e-21
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 96 1e-20
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 80 9e-16
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 80 9e-16
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 46 1e-05
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 40 7e-04
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 29 1.7
Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical p... 29 2.3
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 27 9.3
L23646-2|AAK67235.1| 304|Caenorhabditis elegans Hypothetical pr... 27 9.3
AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical... 27 9.3
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 320 bits (785), Expect = 4e-88
Identities = 149/157 (94%), Positives = 155/157 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSY 280
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
NSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKE
Sbjct: 281 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 320 bits (785), Expect = 4e-88
Identities = 149/157 (94%), Positives = 155/157 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSY 280
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
NSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKE
Sbjct: 281 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 320 bits (785), Expect = 4e-88
Identities = 149/157 (94%), Positives = 155/157 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSY 280
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
NSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKE
Sbjct: 281 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 320 bits (785), Expect = 4e-88
Identities = 149/157 (94%), Positives = 155/157 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 117 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 176
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET Y
Sbjct: 177 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSY 236
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
NSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKE
Sbjct: 237 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 273
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 320 bits (785), Expect = 4e-88
Identities = 149/157 (94%), Positives = 155/157 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 147 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 206
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET Y
Sbjct: 207 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSY 266
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
NSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKE
Sbjct: 267 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 303
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 320 bits (785), Expect = 4e-88
Identities = 149/157 (94%), Positives = 155/157 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSY 280
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
NSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKE
Sbjct: 281 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 319 bits (783), Expect = 8e-88
Identities = 148/157 (94%), Positives = 155/157 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSY 280
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
NSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKE
Sbjct: 281 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 319 bits (783), Expect = 8e-88
Identities = 148/157 (94%), Positives = 155/157 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSY 280
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
NSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKE
Sbjct: 281 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 319 bits (783), Expect = 8e-88
Identities = 148/157 (94%), Positives = 155/157 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSY 280
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
NSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKE
Sbjct: 281 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 319 bits (783), Expect = 8e-88
Identities = 148/157 (94%), Positives = 155/157 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSY 280
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
NSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKE
Sbjct: 281 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 298 bits (731), Expect = 2e-81
Identities = 137/157 (87%), Positives = 148/157 (94%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYV
Sbjct: 160 THTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYV 219
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
A DFE E+A AA+S+SLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHET Y
Sbjct: 220 AHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTY 279
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
SIMKCDVDIRKDLYANTV+SGGT+M+PGIADRMQKE
Sbjct: 280 QSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKE 316
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 184 bits (448), Expect = 3e-47
Identities = 81/157 (51%), Positives = 109/157 (69%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F +A+ E VR +KEKLCY+
Sbjct: 164 THICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYI 223
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
A D EQE A +T L + Y LPDG+VI +G ERF PE LFQP + +E G+ E ++
Sbjct: 224 AYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLF 283
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
I D+D R D Y + V+SGGTTMYPG+ R++KE
Sbjct: 284 GCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKE 320
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 160 bits (389), Expect = 4e-40
Identities = 78/157 (49%), Positives = 103/157 (65%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+H VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR++KE CY+
Sbjct: 164 THAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYL 223
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALD T + S++ SY LPD I I N FR PE LF+P +G E G+ V
Sbjct: 224 ALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVN 278
Query: 370 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
SIMKCDVD+R+ LY+N V+SGGTT++ G DR+ E
Sbjct: 279 QSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGE 315
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 99.5 bits (237), Expect = 1e-21
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+H +P+ +GY + I + +AGRD+T ++ +L +R ++ E+ + IKEK CYV
Sbjct: 182 THCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYV 241
Query: 190 ALDFEQEMATAAASTSLEKSYELPDG-QVIT-------IGNERFRCPEALFQPSFLGME- 342
D +E T K DG IT +G ERF PE F P F E
Sbjct: 242 CPDVMKEF--VKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEFCNPEF 299
Query: 343 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
+ I +T+ I +C +D+R+ LY N V+SGG+TM+ A ++Q++
Sbjct: 300 TTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRD 345
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 96.3 bits (229), Expect = 1e-20
Identities = 50/160 (31%), Positives = 89/160 (55%), Gaps = 6/160 (3%)
Frame = +1
Query: 19 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIVRDIKEKLCYV 189
VP+ +GY + AI + + + D L L+ Y+F + E+ I+R E+ YV
Sbjct: 335 VPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLILRFALEQTTYV 394
Query: 190 ALDFEQEMATAAAST--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGMESCGIHE 360
D+++E + T SL+ P Q I N RF C E LF+P G+++ G+H+
Sbjct: 395 PEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLDTKGLHQ 454
Query: 361 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
++ +I++C +D R+ LY N ++GG ++ PGIA+++++E
Sbjct: 455 LIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQE 494
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 79.8 bits (188), Expect = 9e-16
Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 22/171 (12%)
Frame = +1
Query: 34 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 213
G + +++R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M
Sbjct: 163 GMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESM 220
Query: 214 ATAA---ASTSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPS 327
A + K Y +PD G V I +G ERF PE LF PS
Sbjct: 221 KEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPS 280
Query: 328 FLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
+ ++ CG+ E V SI +C +R L N ++ GG++ +PG +R+++E
Sbjct: 281 DIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLERE 331
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 79.8 bits (188), Expect = 9e-16
Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 22/171 (12%)
Frame = +1
Query: 34 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 213
G + +++R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M
Sbjct: 163 GMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESM 220
Query: 214 ATAA---ASTSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPS 327
A + K Y +PD G V I +G ERF PE LF PS
Sbjct: 221 KEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPS 280
Query: 328 FLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
+ ++ CG+ E V SI +C +R L N ++ GG++ +PG +R+++E
Sbjct: 281 DIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLERE 331
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 46.0 bits (104), Expect = 1e-05
Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 35/192 (18%)
Frame = +1
Query: 1 ARGSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT---AEREIVRD-- 165
A + VP+++GYA+ HA+++ + G +T+ L ++L ++ T +E V +
Sbjct: 180 ATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQKIDVIPTYRIGGKEEVNEGE 239
Query: 166 -----IKEKLCYVALDFE--------QEMATA---AASTSLEKSY---------ELPDGQ 270
++ L V ++ ++MA TS++ Y P+G
Sbjct: 240 APKWTPRKNLPQVTKSYDAFMKKMLLEDMAATMLQLCDTSIDMDYVDKLPSTPYAFPNGY 299
Query: 271 VITIGNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLYANTVMSG 435
G ER + PE LF +L E + + S D+DIR L++N ++G
Sbjct: 300 TKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNVTVTG 359
Query: 436 GTTMYPGIADRM 471
G ++ G +R+
Sbjct: 360 GNSLILGFTERL 371
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 40.3 bits (90), Expect = 7e-04
Identities = 13/39 (33%), Positives = 27/39 (69%)
Frame = +1
Query: 364 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
++ + KC +D+RK L+ N +++GG + PG+ R+++E
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQE 232
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -2
Query: 153 FPLSGGGERVAPLSEDLHEVVGQVASSQVQTEDGVGQGVTFVDGH 19
F L+GG + DL + G++ ++V E G+ Q + F+D +
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -2
Query: 435 TRHDSVGVQVLTDVNVALHDRVVDGLVDAARFHTQE 328
T + V +Q TD++ L ++++DGL+ A + TQE
Sbjct: 889 TIENIVALQGATDIDARLEEQLIDGLLYAFQEQTQE 924
>Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -2
Query: 435 TRHDSVGVQVLTDVNVALHDRVVDGLVDAARFHTQE 328
T + V +Q TD++ L ++++DGL+ A + TQE
Sbjct: 889 TIENIVALQGATDIDARLEEQLIDGLLYAFQEQTQE 924
>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical
protein F57C7.1b protein.
Length = 1087
Score = 26.6 bits (56), Expect = 9.3
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = -3
Query: 335 PKNEGWKRASGQRNLSLPMVIT*PSGSSYDFSREVEAAAV-AISCSKSRAT*QSFSLMSR 159
PK G K G++ SLP + S D + + E++ V +I+ T SR
Sbjct: 418 PKQRGRKSTRGRKKTSLPRGASTFKDESVDDNNDDESSKVDSINFDDDDDTATEKDAESR 477
Query: 158 TISLSAVVVNE*P 120
S+ VVNE P
Sbjct: 478 AESVQPEVVNEEP 490
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical
protein F57C7.1a protein.
Length = 1209
Score = 26.6 bits (56), Expect = 9.3
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = -3
Query: 335 PKNEGWKRASGQRNLSLPMVIT*PSGSSYDFSREVEAAAV-AISCSKSRAT*QSFSLMSR 159
PK G K G++ SLP + S D + + E++ V +I+ T SR
Sbjct: 418 PKQRGRKSTRGRKKTSLPRGASTFKDESVDDNNDDESSKVDSINFDDDDDTATEKDAESR 477
Query: 158 TISLSAVVVNE*P 120
S+ VVNE P
Sbjct: 478 AESVQPEVVNEEP 490
>L23646-2|AAK67235.1| 304|Caenorhabditis elegans Hypothetical
protein F44E2.10 protein.
Length = 304
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 357 VDAARFHTQERGLEESFGATEPLVTDGDHLTVGKF 253
VD + ER +ESF P+ DG+++ + KF
Sbjct: 86 VDDMEIYQTERWSKESFSYDVPISEDGEYVIILKF 120
>AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical
protein Y53F4B.13 protein.
Length = 927
Score = 26.6 bits (56), Expect = 9.3
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2
Query: 44 CPTPSSVWTW 73
CP PSS+W+W
Sbjct: 864 CPIPSSIWSW 873
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,881,637
Number of Sequences: 27780
Number of extensions: 208432
Number of successful extensions: 702
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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