Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I08
         (481 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             188   3e-50
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   1.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   1.7  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   6.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   6.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.1  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  188 bits (458), Expect = 3e-50
 Identities = 86/91 (94%), Positives = 90/91 (98%)
 Frame = +1

Query: 208 EMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKC 387
           EMATAA+S+SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME+CGIHET YNSIMKC
Sbjct: 1   EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 60

Query: 388 DVDIRKDLYANTVMSGGTTMYPGIADRMQKE 480
           DVDIRKDLYANTV+SGGTTMYPGIADRMQKE
Sbjct: 61  DVDIRKDLYANTVLSGGTTMYPGIADRMQKE 91


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 168 DVTYDFPLSGGGERVAPLSEDLHEV 94
           D++YDF + GGG   A ++  L EV
Sbjct: 66  DLSYDFIVVGGGAARAVVAGRLSEV 90


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -2

Query: 171 LDVTYDFPLSGGGERVAPLSEDLHEVVGQVASSQVQTEDGVGQ-GVT 34
           +D+T     S  G+ V     +L+ +VG  A+  +  E+G G  GVT
Sbjct: 19  VDLTQCLQESSTGQSVEFSPMELNALVGTPAAPNMPAEEGEGMAGVT 65


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -3

Query: 338 IPKNEGWKRASGQRNLSLPMVIT*PSGSSYDFSREVEAAAVAI 210
           IP +      +G+RN+  P+V +    +++ +  +VE  A+ I
Sbjct: 170 IPHDIAINSTTGKRNVVTPIVQSFDYNNTWVYIADVEGYALII 212


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +2

Query: 287 TRGSVAPKLSSSPRSWVWN 343
           TRG + P   +    W WN
Sbjct: 351 TRGFLQPVCQNEMNKWWWN 369


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 10  SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 108
           +H +  Y GY  P   +  D A  + T+  MK+
Sbjct: 187 NHQLISYAGYKNPDGTIIGDPANIEFTELCMKL 219


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 11  LTPCPSTKVTPCPTP 55
           LTP  S  V+P P+P
Sbjct: 435 LTPPSSNPVSPVPSP 449


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,441
Number of Sequences: 438
Number of extensions: 2647
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)