Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I07
(441 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0546 - 9381989-9383733,9385838-9386054 224 3e-59
05_05_0109 - 22454539-22456268,22457069-22457279 223 4e-59
03_02_0540 + 9340379-9340592,9341250-9342988 223 5e-59
03_06_0484 + 34233042-34233258,34235317-34237049 222 1e-58
11_08_0075 + 28173220-28173433,28175348-28177083 221 3e-58
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 220 3e-58
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 202 1e-52
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 201 2e-52
03_02_0542 - 9348126-9349585,9352433-9352655 198 2e-51
08_01_0654 - 5639419-5641449 191 2e-49
05_04_0392 - 20889699-20891726 190 6e-49
05_04_0052 - 17515344-17517353 186 9e-48
11_01_0564 - 4447078-4448519,4449465-4449711 185 1e-47
11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,443... 173 4e-44
01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819 173 7e-44
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 135 1e-32
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090... 131 2e-31
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74... 124 2e-29
12_01_0850 + 7985289-7985789,7986636-7986888,7987173-7987231 102 1e-22
01_01_0573 + 4253484-4254653,4255526-4255735,4255842-4255937,425... 101 3e-22
05_01_0550 + 4820086-4821255,4822112-4822321,4822429-4822524,482... 100 4e-22
12_02_0825 + 23476943-23476952,23477263-23477328,23477737-234778... 92 2e-19
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 82 2e-16
11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836 79 2e-15
03_02_0180 - 6211823-6213559 58 2e-09
12_01_0346 + 2652181-2653566 58 4e-09
06_03_1137 + 27903012-27904196,27904330-27904542,27905775-279058... 46 1e-05
05_07_0320 + 29235266-29235305,29235409-29236682 43 1e-04
06_01_0770 - 5756200-5756741,5756790-5757286,5757356-5757782,575... 38 0.005
08_02_0903 + 22438406-22438614,22439640-22440366,22440494-224406... 33 0.13
01_05_0162 + 18759647-18759663,18760128-18760131,18760270-187606... 31 0.54
01_06_0050 + 25967604-25967685,25967780-25967891,25969238-259693... 28 3.8
11_03_0174 - 11235667-11235855,11236557-11236652,11236981-11237145 27 5.1
09_02_0575 + 10845261-10847057 27 5.1
09_04_0286 + 16400695-16401369,16401473-16401658,16402115-164025... 27 6.7
06_03_1241 + 28615175-28615828 27 6.7
09_04_0372 + 17026551-17026778,17027469-17027830,17027925-170279... 27 8.8
07_01_0031 + 251818-252867 27 8.8
02_05_1138 + 34379697-34380902 27 8.8
02_02_0483 - 10830978-10831284,10831727-10832232,10832770-10832856 27 8.8
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 224 bits (547), Expect = 3e-59
Identities = 106/138 (76%), Positives = 118/138 (85%), Gaps = 1/138 (0%)
Frame = +3
Query: 30 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 209
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN
Sbjct: 7 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 66
Query: 210 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSS 386
P NT+FDAKRLIGR+F D +VQADMK WPF+VV KP I V YKGE+K F EE+SS
Sbjct: 67 PTNTVFDAKRLIGRRFSDPSVQADMKMWPFKVVPGPADKPMIVVTYKGEEKKFSAEEISS 126
Query: 387 MVLTKMKETAEAYLGKTV 440
MVLTKMKE AEA+L T+
Sbjct: 127 MVLTKMKEIAEAFLSTTI 144
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 223 bits (546), Expect = 4e-59
Identities = 105/138 (76%), Positives = 119/138 (86%), Gaps = 1/138 (0%)
Frame = +3
Query: 30 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 209
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN
Sbjct: 5 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 64
Query: 210 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSS 386
P NT+FDAKRLIGR+F D +VQ+DMK WPF+VV G KP I V YKGE+K F EE+SS
Sbjct: 65 PTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVVPGPGDKPMIVVQYKGEEKQFAAEEISS 124
Query: 387 MVLTKMKETAEAYLGKTV 440
MVL KM+E AEAYLG ++
Sbjct: 125 MVLIKMREIAEAYLGSSI 142
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 223 bits (545), Expect = 5e-59
Identities = 106/136 (77%), Positives = 118/136 (86%), Gaps = 1/136 (0%)
Frame = +3
Query: 36 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 215
PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP
Sbjct: 8 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPI 67
Query: 216 NTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSSMV 392
NT+FDAKRLIGR+F D +VQ+D K WPF+V+ G KP I V YKGE+K F EE+SSMV
Sbjct: 68 NTVFDAKRLIGRRFSDTSVQSDAKLWPFKVLPGPGDKPMIGVQYKGEEKQFSAEEISSMV 127
Query: 393 LTKMKETAEAYLGKTV 440
L KMKETAEAYLG TV
Sbjct: 128 LNKMKETAEAYLGSTV 143
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 222 bits (542), Expect = 1e-58
Identities = 104/138 (75%), Positives = 119/138 (86%), Gaps = 1/138 (0%)
Frame = +3
Query: 30 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 209
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMN
Sbjct: 7 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMN 66
Query: 210 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSS 386
P NT+FDAKRLIGR+F DA+VQ+D+K WP++V+ G KP I V YKGE+K F EE+SS
Sbjct: 67 PINTVFDAKRLIGRRFSDASVQSDIKMWPYKVIPGPGDKPMIVVQYKGEEKQFSAEEISS 126
Query: 387 MVLTKMKETAEAYLGKTV 440
MVL KM+E AEAYLG TV
Sbjct: 127 MVLIKMREIAEAYLGSTV 144
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 221 bits (539), Expect = 3e-58
Identities = 103/138 (74%), Positives = 120/138 (86%), Gaps = 1/138 (0%)
Frame = +3
Query: 30 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 209
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMN
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMN 65
Query: 210 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSS 386
P NT+FDAKRLIGR+F DA+VQ+D+K WPF+V++ G KP I V YKGE+K F EE+SS
Sbjct: 66 PINTVFDAKRLIGRRFSDASVQSDIKLWPFKVIAGPGDKPMIVVQYKGEEKQFAAEEISS 125
Query: 387 MVLTKMKETAEAYLGKTV 440
MVL KM+E AEAYLG T+
Sbjct: 126 MVLIKMREIAEAYLGTTI 143
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 220 bits (538), Expect = 3e-58
Identities = 106/143 (74%), Positives = 121/143 (84%), Gaps = 3/143 (2%)
Frame = +3
Query: 21 KMAKA--PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN 194
+MAK PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKN
Sbjct: 193 EMAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN 252
Query: 195 QVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFP 371
QVAMNP NT+FDAKRLIGR+F D +VQ+DMK WPF+V+ G KP I V YKGE+K F
Sbjct: 253 QVAMNPINTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPGDKPMIVVQYKGEEKQFSA 312
Query: 372 EEVSSMVLTKMKETAEAYLGKTV 440
EE+SSMVL KM+E AEAYLG +
Sbjct: 313 EEISSMVLIKMREIAEAYLGSNI 335
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 202 bits (493), Expect = 1e-52
Identities = 92/144 (63%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
Frame = +3
Query: 12 KRNKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAK 191
K + K P +GIDLGTTYSCVGV+++G V+I+ANDQGNR TPS+VAFTD ERL+G+AAK
Sbjct: 30 KGGRKTKGPVIGIDLGTTYSCVGVYRNGHVDIVANDQGNRITPSWVAFTDDERLVGEAAK 89
Query: 192 NQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFF 368
NQ A+NP+ TIFD KRLIGR+F+D VQ D+K+ P++VV GGKP ++V K GE K F
Sbjct: 90 NQAALNPDRTIFDIKRLIGRRFDDEEVQRDVKYLPYKVVDKGGKPYVEVRVKAGEVKVFS 149
Query: 369 PEEVSSMVLTKMKETAEAYLGKTV 440
PEE+S+M+L KMKETAE+YLG+ V
Sbjct: 150 PEEISAMILAKMKETAESYLGQRV 173
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 201 bits (490), Expect = 2e-52
Identities = 96/134 (71%), Positives = 113/134 (84%), Gaps = 1/134 (0%)
Frame = +3
Query: 42 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 221
+GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP T
Sbjct: 36 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERT 95
Query: 222 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSSMVLT 398
IFD KRLIGRKFED VQ DMK P+++V+ GKP I+V K GE+K F PEEVS+M+L
Sbjct: 96 IFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVKIKDGENKVFSPEEVSAMILG 155
Query: 399 KMKETAEAYLGKTV 440
KMKETAEAYLGK +
Sbjct: 156 KMKETAEAYLGKKI 169
>03_02_0542 - 9348126-9349585,9352433-9352655
Length = 560
Score = 198 bits (483), Expect = 2e-51
Identities = 97/136 (71%), Positives = 110/136 (80%), Gaps = 1/136 (0%)
Frame = +3
Query: 36 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 215
PAVGIDLGTTYSCV V++ G+VE+I NDQGN TTPS VAFTDT RLIGDAA NQ AMNP
Sbjct: 11 PAVGIDLGTTYSCVAVWRRGRVEVIPNDQGNLTTPSCVAFTDTWRLIGDAALNQAAMNPL 70
Query: 216 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMV 392
NTIFDAKRLIGR+F D +VQ D+K WPF+V S +P I V Y+GE+K F EE+S+MV
Sbjct: 71 NTIFDAKRLIGRRFSDVSVQGDIKLWPFKVTSGKDDRPMIVVQYRGEEKEFSAEEISAMV 130
Query: 393 LTKMKETAEAYLGKTV 440
L KMKETAEAYL KTV
Sbjct: 131 LFKMKETAEAYLDKTV 146
>08_01_0654 - 5639419-5641449
Length = 676
Score = 191 bits (466), Expect = 2e-49
Identities = 95/135 (70%), Positives = 110/135 (81%), Gaps = 2/135 (1%)
Frame = +3
Query: 42 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 218
+GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD ERLIG+AAKNQ A NP
Sbjct: 47 IGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTDGGERLIGEAAKNQAAANPER 106
Query: 219 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSSMVL 395
TI+DAKRLIGR+F DA VQ DMK PF VV GKP ++V K G+ + F PEEVS+MVL
Sbjct: 107 TIYDAKRLIGRQFSDAEVQRDMKLLPFAVVDRNGKPHVRVEVKDGDVRVFSPEEVSAMVL 166
Query: 396 TKMKETAEAYLGKTV 440
T+MKETAEAYLG+ V
Sbjct: 167 TRMKETAEAYLGEKV 181
>05_04_0392 - 20889699-20891726
Length = 675
Score = 190 bits (462), Expect = 6e-49
Identities = 94/135 (69%), Positives = 110/135 (81%), Gaps = 2/135 (1%)
Frame = +3
Query: 42 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 218
+GIDLGTTYSCVGV+++ +VEIIANDQGNR TPS+VAFTD ERLIG+AAKNQ A NP
Sbjct: 47 IGIDLGTTYSCVGVYRNDRVEIIANDQGNRITPSWVAFTDGGERLIGEAAKNQAAANPER 106
Query: 219 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSSMVL 395
TI+DAKRLIGR+F DA VQ DMK PF VV GKP ++V K G+ + F PEEVS+MVL
Sbjct: 107 TIYDAKRLIGRQFSDAEVQRDMKLLPFAVVDRNGKPHVRVEVKDGDVRVFSPEEVSAMVL 166
Query: 396 TKMKETAEAYLGKTV 440
T+MKETAEAYLG+ V
Sbjct: 167 TRMKETAEAYLGEKV 181
>05_04_0052 - 17515344-17517353
Length = 669
Score = 186 bits (452), Expect = 9e-48
Identities = 91/135 (67%), Positives = 108/135 (80%), Gaps = 2/135 (1%)
Frame = +3
Query: 42 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 218
+GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFT ERLIG+AAKNQ A NP
Sbjct: 42 IGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTGGGERLIGEAAKNQAAANPGR 101
Query: 219 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGED-KTFFPEEVSSMVL 395
T++DAKRLIGR+F DA VQ DM+ PF VV GGKP ++V +G D + PEEVS+MVL
Sbjct: 102 TVYDAKRLIGRRFADAEVQRDMRLLPFAVVDKGGKPHVRVEVRGGDVRLLSPEEVSAMVL 161
Query: 396 TKMKETAEAYLGKTV 440
+MKETAEAYLG+ V
Sbjct: 162 ARMKETAEAYLGEEV 176
>11_01_0564 - 4447078-4448519,4449465-4449711
Length = 562
Score = 185 bits (451), Expect = 1e-47
Identities = 89/138 (64%), Positives = 109/138 (78%), Gaps = 3/138 (2%)
Frame = +3
Query: 36 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMN 209
PAVGIDLGTTYSCV V++H + E+IANDQGNR TPS VAFT D + +GDAA NQ A+N
Sbjct: 17 PAVGIDLGTTYSCVAVWRHDRGEVIANDQGNRLTPSCVAFTADDDDSFVGDAAFNQSALN 76
Query: 210 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSS 386
P NTIF+ KRLIGR+F D +VQ D+K WPF+VV+ +P I V ++GE++ F PEE+SS
Sbjct: 77 PTNTIFEVKRLIGRRFSDDSVQKDIKLWPFKVVAGQEDRPMIVVRHEGEERQFMPEEISS 136
Query: 387 MVLTKMKETAEAYLGKTV 440
MVL KM+ETAE YLGKTV
Sbjct: 137 MVLAKMRETAEVYLGKTV 154
>11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,
4430555-4432052,4432199-4432217,4432469-4432675,
4432814-4433065
Length = 1363
Score = 173 bits (422), Expect = 4e-44
Identities = 79/136 (58%), Positives = 105/136 (77%), Gaps = 1/136 (0%)
Frame = +3
Query: 36 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 215
PA+GIDLGTTYSC V +H + E+I NDQGNR TPS VAFT +R +GDAA+NQ A+NP
Sbjct: 642 PAIGIDLGTTYSCAAVRRHNRSEVITNDQGNRITPSCVAFTADDRFVGDAAENQAALNPT 701
Query: 216 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMV 392
NTIF+AKRLIGR+F +VQ D+K WPF+VV+ +P I V ++G++ F PEE+S+MV
Sbjct: 702 NTIFEAKRLIGRRFSSKSVQEDIKLWPFKVVAGPDDRPTIVVQHEGKEMQFVPEEISAMV 761
Query: 393 LTKMKETAEAYLGKTV 440
L+K+++ A AYLG+ V
Sbjct: 762 LSKLRDAAVAYLGEPV 777
Score = 172 bits (419), Expect = 9e-44
Identities = 79/136 (58%), Positives = 105/136 (77%), Gaps = 1/136 (0%)
Frame = +3
Query: 36 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 215
PA+GIDLGTTYSCV V + + E I NDQGNR TPS VAFT +R +GDAA+NQ A+NP
Sbjct: 16 PAIGIDLGTTYSCVAVRRRYRSEAITNDQGNRITPSCVAFTAADRFVGDAAENQAALNPT 75
Query: 216 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEVSSMV 392
NTIF+ KRLIGR+F D +VQ D+K WPF+V++ +P I V ++G++K F PEE+S+MV
Sbjct: 76 NTIFEVKRLIGRRFSDKSVQEDIKLWPFKVIAGRDDRPTIVVRHEGKEKQFVPEEISAMV 135
Query: 393 LTKMKETAEAYLGKTV 440
L+K+++ A AYLG+ V
Sbjct: 136 LSKLRDAAVAYLGEPV 151
>01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819
Length = 539
Score = 173 bits (420), Expect = 7e-44
Identities = 79/136 (58%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Frame = +3
Query: 36 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 215
P +GIDLGT SCV V+Q+G+ EI+ N+ G R TPSY AFTDTERL+GDAAK+Q + NP
Sbjct: 10 PVIGIDLGTACSCVAVWQNGRAEIVTNEHGGRATPSYAAFTDTERLVGDAAKSQASRNPT 69
Query: 216 NTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSSMV 392
NT+F KRL+GR+F DA+VQ +K WPF+VV G KP + +YKG+ K EEV+SM+
Sbjct: 70 NTVFATKRLMGRRFSDASVQDGLKLWPFKVVPGRGDKPMVAASYKGKQKLLAAEEVASML 129
Query: 393 LTKMKETAEAYLGKTV 440
L+KMK AEAY+G V
Sbjct: 130 LSKMKAEAEAYIGGPV 145
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 135 bits (327), Expect = 1e-32
Identities = 68/136 (50%), Positives = 92/136 (67%), Gaps = 3/136 (2%)
Frame = +3
Query: 42 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD--TERLIGDAAKNQVAMNPN 215
+GID+G TYSCV V+ G+VEII NDQG+R TPS+VAFTD ++G+AAK Q +P
Sbjct: 37 LGIDIGATYSCVAVYCKGRVEIIPNDQGSRLTPSWVAFTDGGGRLVVGEAAKEQAVGSPG 96
Query: 216 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKV-AYKGEDKTFFPEEVSSMV 392
+ D RL+G+K D VQ +M P+ VV GKP + V A G+ + PEE+++ V
Sbjct: 97 RAVHDFMRLLGKKLGDDDVQREMTRLPYAVVDMEGKPHVLVEAADGDVRVLSPEEIAAAV 156
Query: 393 LTKMKETAEAYLGKTV 440
L KMK+TAEA+LG+TV
Sbjct: 157 LAKMKKTAEAHLGRTV 172
>02_05_0916 -
32706039-32706332,32707483-32708103,32708450-32709070,
32709183-32709752,32709840-32709918,32710002-32710075,
32711336-32711398
Length = 773
Score = 131 bits (317), Expect = 2e-31
Identities = 67/135 (49%), Positives = 87/135 (64%), Gaps = 2/135 (1%)
Frame = +3
Query: 42 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 218
+GIDLGTT SCV V + ++I N +G RTTPS VAF ERL+G AK Q NP N
Sbjct: 55 IGIDLGTTNSCVSVMEGKNPKVIENSEGTRTTPSVVAFNQKGERLVGTPAKRQAVTNPQN 114
Query: 219 TIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSSMVL 395
T F KRLIGR+FED Q +MK P+++V + G ++ + K + P ++ + VL
Sbjct: 115 TFFGTKRLIGRRFEDPQTQKEMKMVPYKIVKAPNGDAWVETT---DGKQYSPSQIGAFVL 171
Query: 396 TKMKETAEAYLGKTV 440
TKMKETAE+YLGKTV
Sbjct: 172 TKMKETAESYLGKTV 186
>03_01_0093 -
745434-746057,746492-747112,747222-747791,747870-747948,
748258-748331,748385-748387
Length = 656
Score = 124 bits (300), Expect = 2e-29
Identities = 64/135 (47%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 42 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 218
+GIDLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 35 IGIDLGTTNSCVSVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPQN 94
Query: 219 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEVSSMVL 395
T F KRLIGR+F+D Q +MK P+++V G ++ + K + P ++ + VL
Sbjct: 95 TFFGTKRLIGRRFDDPQTQKEMKMVPYKIVKALNGDAWLETT---DGKQYSPSQIGAFVL 151
Query: 396 TKMKETAEAYLGKTV 440
TKMKETAE+YLGK+V
Sbjct: 152 TKMKETAESYLGKSV 166
>12_01_0850 + 7985289-7985789,7986636-7986888,7987173-7987231
Length = 270
Score = 102 bits (244), Expect = 1e-22
Identities = 59/141 (41%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Frame = +3
Query: 21 KMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQ 197
++A VGIDLGTT S V + GK +I N +G RTTPS VA+T ERL+G AK Q
Sbjct: 47 RVACEKVVGIDLGTTNSAVAAMEGGKPTVITNAEGQRTTPSVVAYTKGGERLVGQIAKRQ 106
Query: 198 VAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEE 377
+NP NT F KR IGRK A V + K + VV D +K+ K F EE
Sbjct: 107 AVVNPENTFFSVKRFIGRKM--AEVDDEAKQVSYHVVRD-DNGNVKLDCPAIGKQFAAEE 163
Query: 378 VSSMVLTKMKETAEAYLGKTV 440
+S+ VL K+ + A +L +
Sbjct: 164 ISAQVLRKLVDDASKFLNDKI 184
>01_01_0573 +
4253484-4254653,4255526-4255735,4255842-4255937,
4256034-4256255,4256829-4257023,4257097-4257243,
4257323-4257472,4257762-4257892,4257978-4258194
Length = 845
Score = 101 bits (242), Expect = 3e-22
Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 2/135 (1%)
Frame = +3
Query: 42 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 221
VG DLG V V + ++++ N++ R TP+ V F D +R IG A MNP N+
Sbjct: 4 VGFDLGNESCIVAVARQRGIDVVLNEESKRETPAIVCFGDKQRFIGTAGAASSTMNPKNS 63
Query: 222 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDG--GKPKIKVAYKGEDKTFFPEEVSSMVL 395
+ KRL+GRK+ D +Q D+ +PF VS+G G P + Y GE++ F P ++ +MVL
Sbjct: 64 VSQIKRLLGRKYSDPELQRDIAAFPFR-VSEGPDGFPLVHARYLGEERVFTPTQLMAMVL 122
Query: 396 TKMKETAEAYLGKTV 440
+ +K AE+ L V
Sbjct: 123 SNLKGIAESNLNTAV 137
>05_01_0550 +
4820086-4821255,4822112-4822321,4822429-4822524,
4822610-4822828,4823201-4823395,4823466-4823612,
4823712-4823861,4825015-4825145,4825234-4825477
Length = 853
Score = 100 bits (240), Expect = 4e-22
Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Frame = +3
Query: 42 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 221
VG D+G V V + ++++ N++ R TP+ V F D +R IG A MNP N+
Sbjct: 4 VGFDVGNESGIVAVARQRGIDVVLNEESKRETPAVVCFGDKQRFIGTAGAASSTMNPRNS 63
Query: 222 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDG--GKPKIKVAYKGEDKTFFPEEVSSMVL 395
+ KRL+GR F D +Q D+ +PF VS+G G P + Y GED+ F P ++ +MVL
Sbjct: 64 VSQIKRLLGRAFADPELQRDLASFPFR-VSEGPDGFPLVHARYLGEDRAFTPTQLLAMVL 122
Query: 396 TKMKETAEAYLGKTV 440
+ +K AE L V
Sbjct: 123 SNLKGIAEGNLNAAV 137
>12_02_0825 +
23476943-23476952,23477263-23477328,23477737-23477885,
23478148-23478212,23479247-23479710,23479724-23480208
Length = 412
Score = 91.9 bits (218), Expect = 2e-19
Identities = 44/72 (61%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Frame = +3
Query: 228 DAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEVSSMVLTKM 404
DAKRLIG++F DA+VQ+D+ WPF+V++ G K I V YKGE+K F EE+SSMVL KM
Sbjct: 102 DAKRLIGQRFTDASVQSDIMLWPFKVIAGPGDKSMIVVQYKGEEKQFAAEEISSMVLIKM 161
Query: 405 KETAEAYLGKTV 440
+E AEAYLG T+
Sbjct: 162 REIAEAYLGTTI 173
Score = 62.9 bits (146), Expect = 1e-10
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +3
Query: 216 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMV 392
N +AKRLIGR+F DA+VQ+D+K WPF+V++ G K I V YKGE+K E++
Sbjct: 22 NMAENAKRLIGRRFTDASVQSDIKLWPFKVIAGPGDKSTIVVQYKGEEKQVAAEQIDDET 81
Query: 393 LTKMKETAEAYLG 431
++ A+ Y G
Sbjct: 82 ISPSVCYADPYDG 94
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 82.2 bits (194), Expect = 2e-16
Identities = 46/117 (39%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +3
Query: 93 GKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDAT 269
GK I+ N +G RTTPS VA+T + +RL+G AK Q +NP NT F KR IGRK +
Sbjct: 4 GKPTIVTNAEGARTTPSVVAYTKSGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMNE-- 61
Query: 270 VQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTV 440
V + K + V+ D +K+ K F EE+S+ VL K+ + A +L V
Sbjct: 62 VDEESKQVSYRVIRD-DNGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKV 117
>11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836
Length = 526
Score = 78.6 bits (185), Expect = 2e-15
Identities = 36/72 (50%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Frame = +3
Query: 228 DAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEVSSMVLTKM 404
+AKRLIGR+F D +VQ D+K WPF+V++ +P I V ++G++ F PEEVS+MVL+K+
Sbjct: 16 EAKRLIGRRFSDKSVQEDIKLWPFKVIAGPDDRPTIVVQHEGKEMQFVPEEVSAMVLSKL 75
Query: 405 KETAEAYLGKTV 440
++ A AYL + V
Sbjct: 76 RDAAVAYLSEPV 87
>03_02_0180 - 6211823-6213559
Length = 578
Score = 58.4 bits (135), Expect = 2e-09
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Frame = +3
Query: 39 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD---TERLIGDAAK----NQ 197
A+GID+GT+ V V+ +VE++ N + + SYV F D + + G A + +
Sbjct: 28 AIGIDIGTSNCSVAVWTGHQVELLKNTRNQKGMRSYVMFKDDSLSAGVTGGATREHGHEE 87
Query: 198 VAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPF--EVVSDGGKPKIKVAYKGEDKTFFP 371
+ + IF+ KRLIGR D VQA K PF + + G +P I ++ P
Sbjct: 88 RDILSGSAIFNMKRLIGRMDTDEVVQAS-KSLPFLVQTLGIGVRPFIAALVNNMWRSTTP 146
Query: 372 EEVSSMVLTKMKETAEAYL 428
EEV ++ L ++K E +L
Sbjct: 147 EEVLAIFLLELKALVEMHL 165
>12_01_0346 + 2652181-2653566
Length = 461
Score = 57.6 bits (133), Expect = 4e-09
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Frame = +3
Query: 42 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPNN 218
+ +DLG T SCV + E A P+ VAFT D + L+G+AAKN A
Sbjct: 47 IAVDLGNTNSCVAGYGD---EADAPPLFRLCIPTSVAFTGDGDALVGEAAKNHPA----- 98
Query: 219 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKV--AYKGEDKTFFPEEVSSMV 392
I KRL+G +F V+ +H P+++V I+V G ++ + +V+SMV
Sbjct: 99 AISGFKRLLGTRFGSPEVRRAAEHLPYKIVDWCTMAHIEVNAGAGGAARSVYASDVASMV 158
Query: 393 LTKMKETAEAYL 428
+ ++K AEA L
Sbjct: 159 IAELKARAEARL 170
>06_03_1137 +
27903012-27904196,27904330-27904542,27905775-27905867,
27905940-27906008,27906412-27906612,27906688-27906834,
27907524-27907652,27909001-27909131,27909240-27909333
Length = 753
Score = 46.4 bits (105), Expect = 1e-05
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 5/134 (3%)
Frame = +3
Query: 42 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN-PNN 218
VG D+G + ++++ N + NR +P+ VAF+ RL+G A + + P +
Sbjct: 4 VGFDVGNDTLVAAAARQRGIDVLLNAESNRESPAAVAFSHNARLLGPHAAGAASSHAPFS 63
Query: 219 TIFDAKRLIGRKFEDATVQADMKHWPFEV----VSDGGKPKIKVAYKGEDKTFFPEEVSS 386
+I L GR D+ PF V GG + V + G P ++ +
Sbjct: 64 SIKRLLLLAGRPTLLPRRGGDLSRLPFPVEASSADGGGGVLVHVDHIGRRIALSPTQLLA 123
Query: 387 MVLTKMKETAEAYL 428
M+L +++ AEA L
Sbjct: 124 MLLGYLRQLAEADL 137
>05_07_0320 + 29235266-29235305,29235409-29236682
Length = 437
Score = 43.2 bits (97), Expect = 1e-04
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Frame = +3
Query: 39 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPN 215
A I +G T SC+ + H + + + PS+VAFT + L G Q A++ +
Sbjct: 48 AAAIYIGNTNSCIAGY-HSPPDTATSYRF--CIPSWVAFTANATTLCG-----QPAVDHS 99
Query: 216 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAY----KGEDKTFFPEEVS 383
I KRLIG + D + + P+++ G+ I+V K + F PE+V+
Sbjct: 100 AAISGFKRLIGLQPGDPHAKRVAQIAPYKLGEKIGRCSIQVQLDDGAKCRVEDFLPEDVA 159
Query: 384 SMVLTKMKETAEAYLGKTV 440
+++ +K TAEA+LG +
Sbjct: 160 GILIAHLKSTAEAHLGHRI 178
>06_01_0770 -
5756200-5756741,5756790-5757286,5757356-5757782,
5757854-5757911
Length = 507
Score = 37.5 bits (83), Expect = 0.005
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 21/155 (13%)
Frame = +3
Query: 39 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNR-TTPSYVAFT-DTERLI-GDAAKNQVAMN 209
A I LG T SC+ + + A + PS+VA D +I G+AA N+ A++
Sbjct: 70 AAAIHLGNTNSCIAGYDDDDAPLGAKRSYYQFCIPSWVALAHDNGTVISGEAAMNRAALS 129
Query: 210 PNNTIFDAKRLIGR--------KF----------EDATVQADMKHWPFEVVSDGGKPKIK 335
P+ + RL+ R KF ED V+ +++ P++ G ++
Sbjct: 130 PSTAVSAFMRLLHRRQFPLPSPKFVLGLPDQLGVEDDVVKREIELVPYKFTKMLGWVSVQ 189
Query: 336 VAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTV 440
+ D F + ++ ++++ +K TAEA+LG+ +
Sbjct: 190 L---DTDAEFSVDHLAGILISHLKHTAEAHLGRHI 221
>08_02_0903 +
22438406-22438614,22439640-22440366,22440494-22440679,
22441310-22441770,22441869-22442027,22442098-22442449,
22442563-22442842,22443330-22443661
Length = 901
Score = 32.7 bits (71), Expect = 0.13
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 55 WAQPTLVWVCSSMGKLRSSPMTRATELRP 141
WA+ L W C +M K RSS + R+ +RP
Sbjct: 636 WARWVLTWQCEAMSKERSSGLGRSDAIRP 664
>01_05_0162 +
18759647-18759663,18760128-18760131,18760270-18760617,
18760801-18761016,18763367-18763435,18763560-18764209,
18764993-18765089,18765170-18765223,18765305-18765435,
18766818-18767008,18767937-18768574
Length = 804
Score = 30.7 bits (66), Expect = 0.54
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 329 LWFTSITDNLERPVFHVGLYGGIFKFASDKTFGIKDGVIGVHRNLVL 189
+W SI +NL + G+ + +F D+ +K+ G+ NL L
Sbjct: 132 IWNFSIEENLRYKILSSGMLTRMVRFLDDEDIKVKEAAAGIISNLAL 178
>01_06_0050 +
25967604-25967685,25967780-25967891,25969238-25969361,
25969486-25969527,25969622-25969735,25969843-25969905,
25970741-25970868,25972198-25972279,25972372-25972423,
25972515-25972612,25972845-25973006,25973484-25973573,
25973700-25973777
Length = 408
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -3
Query: 238 RLASKMVLLGFIATWFLAASPIRRSVSVNATYEGVVLLPWSLAMISTF 95
R+ S L+G + T L ASPI + V G +++P +L ++ F
Sbjct: 279 RIISITPLIGVLLTTLLCASPIGQVSEVLKAQGGQLIIPVALLHVAAF 326
>11_03_0174 - 11235667-11235855,11236557-11236652,11236981-11237145
Length = 149
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Frame = -3
Query: 409 SFIFVSTIELTSSGKKVLSSPLYATLIFGLPPSLTTSKG------QCFMSACTVA 263
+F+F + + +V++ LYA +++G+ ++T G C CT+A
Sbjct: 62 AFVFWDAYHTSDAANQVIADRLYADMMWGICAFVSTKSGSITVNASCHPEVCTIA 116
>09_02_0575 + 10845261-10847057
Length = 598
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 298 KGQCFMSACTVASSNLRPIRRLASKMVLLGFI 203
+G C C +SS + +R +A +MV G+I
Sbjct: 91 EGDCCYDVCWCSSSTVHELRSIAERMVRDGYI 122
>09_04_0286 +
16400695-16401369,16401473-16401658,16402115-16402575,
16402678-16402836,16402914-16403265,16403360-16403653
Length = 708
Score = 27.1 bits (57), Expect = 6.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 55 WAQPTLVWVCSSMGKLRSSPMTRATELRP 141
WA+ L W C +M K R + + + +RP
Sbjct: 549 WARWVLTWQCEAMNKERPASLGDSDAIRP 577
>06_03_1241 + 28615175-28615828
Length = 217
Score = 27.1 bits (57), Expect = 6.7
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = -2
Query: 122 LVIGDDLNFPML---EHTHTRVGCAQIDTNCWCFCHF 21
LV GDDL L E THTR+ A +D W F
Sbjct: 119 LVEGDDLTLVRLLRCESTHTRIPPAMLDDILWLLDSF 155
>09_04_0372 +
17026551-17026778,17027469-17027830,17027925-17027968,
17028079-17028293,17028405-17028529,17028617-17028692
Length = 349
Score = 26.6 bits (56), Expect = 8.8
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 66 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 203
YS G F++G E+ + + P Y A T + +A +VA
Sbjct: 112 YSAQGAFKYGLYEVFKKEYADMAGPEYAARYKTLIYLAGSATAEVA 157
>07_01_0031 + 251818-252867
Length = 349
Score = 26.6 bits (56), Expect = 8.8
Identities = 24/75 (32%), Positives = 32/75 (42%)
Frame = -2
Query: 431 AEVSFGSFLHFCEHHRADLLREEGLVLTLVCHLDLWFTSITDNLERPVFHVGLYGGIFKF 252
AE+ GSF F + ++R L+ + C +D FTS L G Y G F F
Sbjct: 262 AEMDPGSFTRFDSSYFRQVVRRRALLRSDACLMDHPFTSAYIRLAA----TGRYDGHF-F 316
Query: 251 ASDKTFGIKDGVIGV 207
+K G IGV
Sbjct: 317 QDFAHSMVKMGAIGV 331
>02_05_1138 + 34379697-34380902
Length = 401
Score = 26.6 bits (56), Expect = 8.8
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 51 DLGTT-YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE 167
D+ T Y CVGV HG+ ++ + ++ S A D E
Sbjct: 178 DMSTRRYKCVGVTWHGRFHVVGGFAESTSSSSPAAAADDE 217
>02_02_0483 - 10830978-10831284,10831727-10832232,10832770-10832856
Length = 299
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 60 TTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE 167
TT + V V Q ++ IAN+QGNR S+ F T+
Sbjct: 208 TTLAGVMVTQTQLLQAIANNQGNRGGSSFGEFVRTK 243
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,461,063
Number of Sequences: 37544
Number of extensions: 289148
Number of successful extensions: 969
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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