Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I07
         (441 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   2.8  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   6.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            22   8.4  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 248  SDKTFGIKDGVIGVHRNLVLGCITDK 171
            +D    ++DG +G++R LV  CI  K
Sbjct: 1049 ADDLHQLEDGEVGIYRRLVGCCIGAK 1074


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 95  PMLEHTHTRVGCAQIDTNCWCFCHFVSF 12
           P++E    +  C + DT+C+  CH   F
Sbjct: 723 PLVEALPNQFLC-KYDTHCFALCHCCDF 749


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = +2

Query: 23   NGKSTSSWYRSGHNLLLCGCVPAWES*DHR--Q*PG 124
            +GK   S+    HNLLL    P  E   H+  Q PG
Sbjct: 1802 DGKYKRSYSYEPHNLLLSNLFPPREGFHHKAVQLPG 1837


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,963
Number of Sequences: 2352
Number of extensions: 10773
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)