Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I07
(441 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 246 4e-66
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 241 1e-64
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 216 5e-57
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 216 5e-57
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 209 6e-55
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 199 8e-52
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 199 8e-52
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 196 8e-51
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 125 1e-29
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 124 3e-29
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 110 4e-25
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 110 4e-25
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 97 5e-21
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 91 4e-19
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 59 1e-09
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 59 1e-09
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical pr... 30 0.86
U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical pr... 30 0.86
AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein. 30 0.86
Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical pr... 28 3.5
U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam ... 27 4.6
U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam ... 27 4.6
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 246 bits (603), Expect = 4e-66
Identities = 115/140 (82%), Positives = 128/140 (91%), Gaps = 1/140 (0%)
Frame = +3
Query: 24 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 203
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 204 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 380
MNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 381 SSMVLTKMKETAEAYLGKTV 440
SSMVL KMKETAEA+LG TV
Sbjct: 121 SSMVLLKMKETAEAFLGTTV 140
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 241 bits (591), Expect = 1e-64
Identities = 113/140 (80%), Positives = 127/140 (90%), Gaps = 1/140 (0%)
Frame = +3
Query: 24 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 203
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 204 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 380
MNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 381 SSMVLTKMKETAEAYLGKTV 440
SSMVL KMK+TAEA+L TV
Sbjct: 121 SSMVLLKMKKTAEAFLEPTV 140
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 216 bits (528), Expect = 5e-57
Identities = 97/139 (69%), Positives = 117/139 (84%)
Frame = +3
Query: 24 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 203
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 204 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 383
NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
Query: 384 SMVLTKMKETAEAYLGKTV 440
+MVL KMKETAE YLG TV
Sbjct: 121 AMVLQKMKETAETYLGHTV 139
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 216 bits (528), Expect = 5e-57
Identities = 97/139 (69%), Positives = 117/139 (84%)
Frame = +3
Query: 24 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 203
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 204 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 383
NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
Query: 384 SMVLTKMKETAEAYLGKTV 440
+MVL KMKETAE YLG TV
Sbjct: 121 AMVLQKMKETAETYLGHTV 139
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 209 bits (511), Expect = 6e-55
Identities = 94/139 (67%), Positives = 116/139 (83%)
Frame = +3
Query: 24 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 203
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 204 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 383
NP NT+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE + F EE+S
Sbjct: 61 RNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEIS 120
Query: 384 SMVLTKMKETAEAYLGKTV 440
+MVL KMKETAEA LG +V
Sbjct: 121 AMVLQKMKETAEAVLGHSV 139
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 199 bits (485), Expect = 8e-52
Identities = 92/135 (68%), Positives = 111/135 (82%), Gaps = 2/135 (1%)
Frame = +3
Query: 42 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVAMNPN 215
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 216 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 395
NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+MVL
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVL 155
Query: 396 TKMKETAEAYLGKTV 440
KMKE AE+YLGK V
Sbjct: 156 VKMKEIAESYLGKEV 170
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 199 bits (485), Expect = 8e-52
Identities = 92/135 (68%), Positives = 111/135 (82%), Gaps = 2/135 (1%)
Frame = +3
Query: 42 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVAMNPN 215
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 216 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 395
NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+MVL
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVL 155
Query: 396 TKMKETAEAYLGKTV 440
KMKE AE+YLGK V
Sbjct: 156 VKMKEIAESYLGKEV 170
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 196 bits (477), Expect = 8e-51
Identities = 92/135 (68%), Positives = 109/135 (80%), Gaps = 2/135 (1%)
Frame = +3
Query: 42 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT--ERLIGDAAKNQVAMNPN 215
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 216 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 395
NTIFDAKRLIGR + + TVQ D+KHWPF++V KP ++V E K F PEEVS+MVL
Sbjct: 93 NTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAMVL 152
Query: 396 TKMKETAEAYLGKTV 440
TKMK+ AE+YLG V
Sbjct: 153 TKMKQIAESYLGHEV 167
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 125 bits (302), Expect = 1e-29
Identities = 67/139 (48%), Positives = 89/139 (64%), Gaps = 2/139 (1%)
Frame = +3
Query: 30 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 206
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 207 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVS 383
N NT+F KRLIGR++ED VQ D+K P+++V + G + + + K + P +V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWV----EAQGKVYSPSQVG 145
Query: 384 SMVLTKMKETAEAYLGKTV 440
+ VL KMKETAE+YLG TV
Sbjct: 146 AFVLMKMKETAESYLGTTV 164
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 124 bits (299), Expect = 3e-29
Identities = 67/139 (48%), Positives = 89/139 (64%), Gaps = 2/139 (1%)
Frame = +3
Query: 30 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 206
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 207 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVS 383
N NT+F KRLIGR++ED VQ D+K P+++V + G + + + K + P +V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWV----EAQGKEYPPSQVG 145
Query: 384 SMVLTKMKETAEAYLGKTV 440
+ VL KMKETAE+YLG TV
Sbjct: 146 AFVLMKMKETAESYLGTTV 164
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 110 bits (265), Expect = 4e-25
Identities = 58/136 (42%), Positives = 85/136 (62%), Gaps = 2/136 (1%)
Frame = +3
Query: 39 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 215
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 216 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPEEVSSMV 392
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 393 LTKMKETAEAYLGKTV 440
L +K AE LG V
Sbjct: 121 LRCLKYNAERKLGLEV 136
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 110 bits (265), Expect = 4e-25
Identities = 58/136 (42%), Positives = 85/136 (62%), Gaps = 2/136 (1%)
Frame = +3
Query: 39 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 215
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 216 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPEEVSSMV 392
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 393 LTKMKETAEAYLGKTV 440
L +K AE LG V
Sbjct: 121 LRCLKYNAERKLGLEV 136
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 97.1 bits (231), Expect = 5e-21
Identities = 54/138 (39%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Frame = +3
Query: 45 GIDLGTTYSCVGVFQH--GKVEIIANDQGNRTTPSYVAFTDTER-LIGDAAKNQVAMNPN 215
GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG A Q NP
Sbjct: 37 GIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHNPK 96
Query: 216 NTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSS 386
TI+DAKR IGR FE + +D K +PF++ D GK ++ K +PEE+ S
Sbjct: 97 RTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEIGS 156
Query: 387 MVLTKMKETAEAYLGKTV 440
+++ +K A +LG T+
Sbjct: 157 LIIGYLKSAAAKHLGVTL 174
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 90.6 bits (215), Expect = 4e-19
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Frame = +3
Query: 42 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 221
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N NT
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Query: 222 IFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLT 398
+ + K LIGRKF D Q + P +VV ++V+Y GE TF PE+V + +LT
Sbjct: 64 VINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLT 123
Query: 399 KMKETAEAYL 428
K++ E+ L
Sbjct: 124 KLRTIVESQL 133
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 59.3 bits (137), Expect = 1e-09
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Frame = +3
Query: 27 AKAPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 203
A A+ IDLG+ + +G+ + G ++I+ N + R TP+ ++F + ER +AA +
Sbjct: 8 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 67
Query: 204 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 380
+P ++ +I RK D K +PF D + + YK E+K + E +
Sbjct: 68 SHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETL 125
Query: 381 SSMVLTKMKETAEAYLGKTV 440
+M+L K+ EAY +TV
Sbjct: 126 LAMILWNAKKVTEAYADQTV 145
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 59.3 bits (137), Expect = 1e-09
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Frame = +3
Query: 27 AKAPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 203
A A+ IDLG+ + +G+ + G ++I+ N + R TP+ ++F + ER +AA +
Sbjct: 24 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 83
Query: 204 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 380
+P ++ +I RK D K +PF D + + YK E+K + E +
Sbjct: 84 SHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETL 141
Query: 381 SSMVLTKMKETAEAYLGKTV 440
+M+L K+ EAY +TV
Sbjct: 142 LAMILWNAKKVTEAYADQTV 161
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 52.8 bits (121), Expect = 1e-07
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Frame = +3
Query: 39 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 215
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA P+
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYPH 85
Query: 216 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 395
L+G+ + + + + F V D K + +K +++ E +++M+L
Sbjct: 86 LVHGQLNDLVGKSTQHPSFELFKRRNTFFEVDDAPKNASSINFKLGGESYTVEALTAMIL 145
Query: 396 TKMKETAEAY 425
K+ E Y
Sbjct: 146 ANAKKFTEEY 155
>U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical
protein W01C8.5b protein.
Length = 323
Score = 29.9 bits (64), Expect = 0.86
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 12 KRNKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 149
K+N K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 92 KKNTDGKPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 137
>U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical
protein W01C8.5a protein.
Length = 511
Score = 29.9 bits (64), Expect = 0.86
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 12 KRNKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 149
K+N K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 280 KKNTDGKPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 325
>AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein.
Length = 511
Score = 29.9 bits (64), Expect = 0.86
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 12 KRNKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 149
K+N K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 280 KKNTDGKPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 325
>Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical
protein H03G16.2 protein.
Length = 377
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 346 RVRTRPSSLRRSARWCSQK*RKLP 417
RV RP S+RR WCS+ ++ P
Sbjct: 132 RVCIRPPSMRRRYSWCSENVKRKP 155
>U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam
protein 6, isoform b protein.
Length = 1227
Score = 27.5 bits (58), Expect = 4.6
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = -2
Query: 401 FCEHHRADLLREEGLVLTLVCHLDLWFTSITDNLERPVFHVGLYGGIFKFASDKTFGI 228
+C HH L + + L L +DL + L P FHVG G D + I
Sbjct: 84 YC-HHEGGELMDTSVTLLLEDVMDLLKNLHENGLSEPTFHVGGMGQALNRTEDGNYKI 140
>U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam
protein 6, isoform d protein.
Length = 1196
Score = 27.5 bits (58), Expect = 4.6
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = -2
Query: 401 FCEHHRADLLREEGLVLTLVCHLDLWFTSITDNLERPVFHVGLYGGIFKFASDKTFGI 228
+C HH L + + L L +DL + L P FHVG G D + I
Sbjct: 53 YC-HHEGGELMDTSVTLLLEDVMDLLKNLHENGLSEPTFHVGGMGQALNRTEDGNYKI 109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,075,430
Number of Sequences: 27780
Number of extensions: 235400
Number of successful extensions: 752
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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