Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I07
         (441 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   1.1  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              22   2.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.9  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 10  TKETKWQKHQQLVSIWAQPTLVWVCSS 90
           T+  K+ KH+    +W    LVW  S+
Sbjct: 289 TQPIKYAKHKNNRRVWLTILLVWAISA 315


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +1

Query: 61  QPTLVWVCSSMGKLRSSPMTRATELRPRTLRSPTLS 168
           QPTL  +CS  G    S     T   P T  + T+S
Sbjct: 74  QPTLRLLCSIAGGTSESQWEDVTGSTPLTFVNDTVS 109


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 93  HAGTHPHKSRLC 58
           H G  PHK  +C
Sbjct: 170 HTGERPHKCTVC 181


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,375
Number of Sequences: 438
Number of extensions: 2663
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)