Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I06
         (510 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    24   0.68 
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            22   2.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   2.8  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    22   3.7  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   4.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.4  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.4  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 24.2 bits (50), Expect = 0.68
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -1

Query: 360 TRLWMRIWNLSQVLEPSPQGVLRVVMRRTLV 268
           TRLW R   L +VL   P    R   +R LV
Sbjct: 533 TRLWPRAAALGEVLWSEPTNTWREAEQRILV 563


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 239 LRVKGPVRMPTNVL 280
           +RVK P+RMPT  L
Sbjct: 1   MRVKHPLRMPTGHL 14


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 239 LRVKGPVRMPTNVL 280
           +RVK P+RMPT  L
Sbjct: 1   MRVKHPLRMPTGHL 14


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 365 RSHACGCASGICPKSWN 315
           R+H   C   ICPK+++
Sbjct: 2   RTHTLPCKCTICPKAFS 18


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 5/20 (25%), Positives = 15/20 (75%)
 Frame = +2

Query: 110 KDIEKPQAEISPIHRIRITL 169
           +++EK + ++S +H+  +T+
Sbjct: 92  REVEKAKRDLSSVHKTTLTI 111


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 142 TDPSYQDHADVTQCTL 189
           TDP+     D TQC L
Sbjct: 154 TDPNRAPDCDPTQCVL 169


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 462 CAYASAMVTSTSTPGSILIEVICFTIS 382
           C  ASA++ ST    +   +++CF  S
Sbjct: 6   CLLASALLISTHQTEAKTDKILCFFAS 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,873
Number of Sequences: 336
Number of extensions: 2597
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)