Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I06
         (510 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   2.6  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   3.4  
AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative odorant-b...    23   4.5  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 137  SQPGASRYPFLTRQRLPCCCDIPVEIN 57
            S PG S+ P L R+  P  C +  +I+
Sbjct: 1147 SGPGGSKTPILNRKEKPKSCSVCRQIS 1173


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +2

Query: 65  RPEYRNNMAAAVVSGKDIEKPQAEISPIHRIRITLTSRNVRSLEK 199
           R E  N    A    KD+EKP+ E     +   TLT    + ++K
Sbjct: 269 RTEKHNRCKLAEREMKDLEKPKTEAVEYLKQENTLTRTRNQQIQK 313


>AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative
          odorant-binding protein OBPjj16 protein.
          Length = 198

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 83 CCDIPVEINNFQIKNCSALN 24
          CC IP  I+N  ++ C A N
Sbjct: 37 CCKIPKPIDNAIMEKCRAEN 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,999
Number of Sequences: 2352
Number of extensions: 11574
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)