Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I05
(579 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin ... 197 5e-51
Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical pr... 170 5e-43
AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical... 44 1e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 33 0.19
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 30 1.0
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 4.2
Z66515-8|CAD59154.1| 488|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z66515-7|CAA91351.1| 460|Caenorhabditis elegans Hypothetical pr... 27 7.3
AF039711-5|AAB96708.1| 430|Caenorhabditis elegans Hypothetical ... 27 7.3
AF039041-8|AAB94189.2| 448|Caenorhabditis elegans Hypothetical ... 27 9.6
>U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin
protein 2 protein.
Length = 195
Score = 197 bits (480), Expect = 5e-51
Identities = 90/119 (75%), Positives = 101/119 (84%)
Frame = +2
Query: 29 TRVIAASTDSHFTHLAWINTSRKQGGLGPMNIPIISDKSHRISRDYGVLDEETGIPFRGL 208
T V+AASTDS F+HLAWIN RK GGLG MNIP+++D +H+ISRDYGVL E+ GI FRGL
Sbjct: 68 TVVLAASTDSVFSHLAWINQPRKHGGLGEMNIPVLADTNHQISRDYGVLKEDEGIAFRGL 127
Query: 209 FIIDDKQNLRQITVNDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWHPGSKTIKPDTK 385
FIID QNLRQIT+NDLPVGRSV+ETLRLVQAFQF +KHGEVCPA W PGS TIKP K
Sbjct: 128 FIIDPSQNLRQITINDLPVGRSVDETLRLVQAFQFVEKHGEVCPAGWTPGSDTIKPGVK 186
>Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical
protein R07E5.2 protein.
Length = 226
Score = 170 bits (414), Expect = 5e-43
Identities = 72/120 (60%), Positives = 96/120 (80%)
Frame = +2
Query: 17 QEFGTRVIAASTDSHFTHLAWINTSRKQGGLGPMNIPIISDKSHRISRDYGVLDEETGIP 196
+ G V+A S DSHF+HLAW+NT RK GGLG M+IP+++D + +I+ +GVLD+E+G+
Sbjct: 93 RSLGAEVVACSCDSHFSHLAWVNTPRKDGGLGDMDIPLLADFNKKIADSFGVLDKESGLS 152
Query: 197 FRGLFIIDDKQNLRQITVNDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWHPGSKTIKP 376
+RGLF+ID +R T NDLPVGRSV+ETLR+++AFQF+DKHGEVCPA+WH S TIKP
Sbjct: 153 YRGLFLIDPSGTVRHTTCNDLPVGRSVDETLRVLKAFQFSDKHGEVCPADWHEDSPTIKP 212
>AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical
protein Y38C1AA.11 protein.
Length = 231
Score = 43.6 bits (98), Expect = 1e-04
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 10/140 (7%)
Frame = +2
Query: 8 PVLQEFGTRVIAASTDSHFTHLAW---INTSRKQGGLGP-MNIPIISDKSHRISRDYGVL 175
P ++ +++A S DS TH W IN+ + G + II+D I + G++
Sbjct: 56 PEFRKRHVQILAISIDSSETHRDWAKDINSVAQLSNCGSHLPFEIIADTDRSICTELGMI 115
Query: 176 DEET----GIPF--RGLFIIDDKQNLRQITVNDLPVGRSVEETLRLVQAFQFTDKHGEVC 337
D + GI R + + + L+ + GR+ E LR+V Q K
Sbjct: 116 DPDEMNSEGICLSARAVMLFGPDKKLKSKILYPATFGRNFVEILRMVDGVQLGTKAPVAT 175
Query: 338 PANWHPGSKTIKPDTKARAR 397
PANW G I + ++ R
Sbjct: 176 PANWIAGDNVIAQPSLSQER 195
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 32.7 bits (71), Expect = 0.19
Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -3
Query: 214 DEESAEGDAGLLVE--DAVIARDAVRLVAYYRYVHGTETALFTGGVDPSQVGEVRVRGGG 41
D +S G A VE D A DAVR Y + FT GV P G ++ GG
Sbjct: 39 DIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGG 98
Query: 40 DHPRAEFLQHRG 5
DH +F RG
Sbjct: 99 DHRGGDFRGGRG 110
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 30.3 bits (65), Expect = 1.0
Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = -3
Query: 214 DEESAEGDAGLLVE--DAVIARDAVRLVAYYRYVHGTETALFTGGVDPSQVGEVRVRGGG 41
D +S G A VE D A DAVR Y + FT GV P ++ GG
Sbjct: 39 DIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPSGRPLQDGG 98
Query: 40 DHPRAEFLQHRG 5
DH +F RG
Sbjct: 99 DHRGGDFRGGRG 110
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 235 PPDHRQRSAGRTVSRGDPEAGPGVPVHGQARRGLPR 342
PP +Q+ G +G P+ G G P G + G P+
Sbjct: 310 PPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPPQ 345
>Z66515-8|CAD59154.1| 488|Caenorhabditis elegans Hypothetical
protein R53.7b protein.
Length = 488
Score = 27.5 bits (58), Expect = 7.3
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Frame = +2
Query: 32 RVIAA-STDSHFTHLA-WINTSRKQGGLGPM-NIPIISDKSHRISRDYGVLDEETGIPFR 202
RVIAA + H A W++ S +G N+ +IS Y +++ G +
Sbjct: 299 RVIAAIHKQNRSLHFAQWLSKSIGMSAIGTWENVAVISQNE----TVYRAMEDMLGFHYS 354
Query: 203 GLFIIDDKQN-LRQITVNDL--PVGRSVEETLRLVQAFQFTD 319
L ++D KQN + IT D+ + R+ E R +Q + +D
Sbjct: 355 ALPVVDSKQNVIGVITKTDICKALPRNFIEPKRWLQETKVSD 396
>Z66515-7|CAA91351.1| 460|Caenorhabditis elegans Hypothetical
protein R53.7a protein.
Length = 460
Score = 27.5 bits (58), Expect = 7.3
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Frame = +2
Query: 32 RVIAA-STDSHFTHLA-WINTSRKQGGLGPM-NIPIISDKSHRISRDYGVLDEETGIPFR 202
RVIAA + H A W++ S +G N+ +IS Y +++ G +
Sbjct: 271 RVIAAIHKQNRSLHFAQWLSKSIGMSAIGTWENVAVISQNE----TVYRAMEDMLGFHYS 326
Query: 203 GLFIIDDKQN-LRQITVNDL--PVGRSVEETLRLVQAFQFTD 319
L ++D KQN + IT D+ + R+ E R +Q + +D
Sbjct: 327 ALPVVDSKQNVIGVITKTDICKALPRNFIEPKRWLQETKVSD 368
>AF039711-5|AAB96708.1| 430|Caenorhabditis elegans Hypothetical
protein F49D11.2 protein.
Length = 430
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 385 GPRQEYFVDANYFIIATYSTNRQLRLDITI*AVSYQLSRMAN*SNASLWY 534
G R+ FV+ + I+ + + L+LDI++ V + +M N + S+ Y
Sbjct: 234 GVREREFVEDAHKILEMMESLKNLKLDISLRKVEFFSPKMCNIDHLSITY 283
>AF039041-8|AAB94189.2| 448|Caenorhabditis elegans Hypothetical
protein W03F8.2 protein.
Length = 448
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 218 DDKQNLRQITVNDLPVGRSVEETLRL-VQAFQFTDKHGEVCPANWHPGSKTIK 373
DDK+ + + N+ PV VEE + + V+A Q TD E+ P K K
Sbjct: 94 DDKKEVEEKKENEKPVDVKVEEKVMVKVEATQNTDNSQELKAPEEKPKKKKKK 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,930,862
Number of Sequences: 27780
Number of extensions: 263056
Number of successful extensions: 777
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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