Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I05
         (579 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       22   5.0  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   6.7  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    21   8.8  
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    21   8.8  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    21   8.8  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   8.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   8.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   8.8  

>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 397 PGAGLGVWLDSLRTGMP 347
           P AG+G  L  L TG+P
Sbjct: 41  PEAGIGAVLKVLTTGLP 57


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +2

Query: 209 FIIDDKQNLRQITVNDLPVGRSVEETLRLVQAFQ 310
           FI+  + N   +  NDL + RS      L   FQ
Sbjct: 335 FILVAENNTTMVFCNDLSIDRSTNTMYVLSDNFQ 368


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +1

Query: 16  AGIRHEGDRRLHGLALHPLGLDQ 84
           AGI   G  R H L    LG+ Q
Sbjct: 125 AGISKNGQTREHALLAFTLGVKQ 147


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +1

Query: 16  AGIRHEGDRRLHGLALHPLGLDQ 84
           AGI   G  R H L    LG+ Q
Sbjct: 52  AGISKNGQTREHALLAFTLGVKQ 74


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +1

Query: 16  AGIRHEGDRRLHGLALHPLGLDQ 84
           AGI   G  R H L    LG+ Q
Sbjct: 68  AGISKNGQTREHALLAFTLGVKQ 90


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +1

Query: 16  AGIRHEGDRRLHGLALHPLGLDQ 84
           AGI   G  R H L    LG+ Q
Sbjct: 125 AGISKNGQTREHALLAFTLGVKQ 147


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -3

Query: 382 GVWLDSLRTGMPVSGAD 332
           G WLD   TG P    D
Sbjct: 47  GAWLDCTATGSPPLNID 63


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -3

Query: 382 GVWLDSLRTGMPVSGAD 332
           G WLD   TG P    D
Sbjct: 47  GAWLDCTATGSPPLNID 63


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 229 EPPPDHRQRSAGRTVSRGDPEA 294
           + PP    RS  + VS G P A
Sbjct: 611 QEPPQWHTRSTEKRVSAGTPAA 632


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,314
Number of Sequences: 438
Number of extensions: 3556
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)