Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I04
(481 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O97159 Cluster: Chromodomain-helicase-DNA-binding prote... 219 2e-56
UniRef50_Q8TDI0 Cluster: Chromodomain-helicase-DNA-binding prote... 184 7e-46
UniRef50_Q4SNF1 Cluster: Chromosome 8 SCAF14543, whole genome sh... 183 2e-45
UniRef50_Q14839-2 Cluster: Isoform 2 of Q14839 ; n=19; Euteleost... 182 3e-45
UniRef50_Q12873 Cluster: Chromodomain-helicase-DNA-binding prote... 182 4e-45
UniRef50_Q22516 Cluster: Chromodomain-helicase-DNA-binding prote... 149 3e-35
UniRef50_Q4RBP9 Cluster: Chromosome undetermined SCAF20953, whol... 106 3e-22
UniRef50_Q9S775 Cluster: CHD3-type chromatin-remodeling factor P... 41 0.017
UniRef50_A7P5Y1 Cluster: Chromosome chr4 scaffold_6, whole genom... 40 0.038
UniRef50_A5BRA6 Cluster: Putative uncharacterized protein; n=2; ... 40 0.038
UniRef50_A7EMR9 Cluster: Putative uncharacterized protein; n=1; ... 36 0.62
UniRef50_A6RVJ8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.62
UniRef50_O14139 Cluster: Chromodomain helicase hrp3; n=2; Schizo... 36 0.62
UniRef50_Q8JGS4 Cluster: Telomere repeat factor a; n=5; Danio re... 35 0.82
UniRef50_A2YA18 Cluster: Putative uncharacterized protein; n=2; ... 35 0.82
UniRef50_P32657 Cluster: Chromo domain-containing protein 1; n=1... 35 1.1
UniRef50_A2ELC4 Cluster: Putative uncharacterized protein; n=1; ... 34 1.9
UniRef50_A7PQX9 Cluster: Chromosome chr6 scaffold_25, whole geno... 33 2.5
UniRef50_Q5KBX3 Cluster: Transcription regulator, putative; n=2;... 33 2.5
UniRef50_A7PE46 Cluster: Chromosome chr11 scaffold_13, whole gen... 33 3.3
UniRef50_Q6CSV4 Cluster: Similar to sp|P32657 Saccharomyces cere... 33 3.3
UniRef50_Q8VX38 Cluster: Telomere repeat binding factor 2; n=2; ... 33 4.4
UniRef50_Q4P477 Cluster: Putative uncharacterized protein; n=1; ... 32 5.8
UniRef50_Q6ZAY7 Cluster: Putative uncharacterized protein OJ1540... 32 7.7
UniRef50_Q54UZ8 Cluster: CHD gene family protein containing chro... 32 7.7
UniRef50_O17909 Cluster: Putative uncharacterized protein; n=2; ... 32 7.7
UniRef50_A1D352 Cluster: Chromodomain helicase (Chd1), putative;... 32 7.7
>UniRef50_O97159 Cluster: Chromodomain-helicase-DNA-binding protein
Mi-2 homolog; n=9; Coelomata|Rep:
Chromodomain-helicase-DNA-binding protein Mi-2 homolog -
Drosophila melanogaster (Fruit fly)
Length = 1982
Score = 219 bits (536), Expect = 2e-56
Identities = 97/102 (95%), Positives = 100/102 (98%)
Frame = +2
Query: 176 RRKFMFNIADGGFTELHTLWLNEERAAAPGREYEIWHRRHDYWLLAGIVTHGYGRWQDIQ 355
+RKFMFNIADGGFTELHTLWLNEE+AA PGREYEIWHRRHDYWLLAGIVTHGYGRWQDIQ
Sbjct: 1724 KRKFMFNIADGGFTELHTLWLNEEKAAVPGREYEIWHRRHDYWLLAGIVTHGYGRWQDIQ 1783
Query: 356 NDLRFAIINEPFKMDVGNGNFLEIKNKFLARRFKLLEQALVI 481
ND+RFAIINEPFKMDVG GNFLEIKNKFLARRFKLLEQALVI
Sbjct: 1784 NDIRFAIINEPFKMDVGKGNFLEIKNKFLARRFKLLEQALVI 1825
>UniRef50_Q8TDI0 Cluster: Chromodomain-helicase-DNA-binding protein 5;
n=30; Deuterostomia|Rep:
Chromodomain-helicase-DNA-binding protein 5 - Homo
sapiens (Human)
Length = 1954
Score = 184 bits (449), Expect = 7e-46
Identities = 83/101 (82%), Positives = 91/101 (90%), Gaps = 1/101 (0%)
Frame = +2
Query: 182 KFMFNIADGGFTELHTLWLNEERAA-APGREYEIWHRRHDYWLLAGIVTHGYGRWQDIQN 358
KFMFNIADGGFTELHTLW NEERAA + G+ Y+IWHRRHDYWLLAGIVTHGY RWQDIQN
Sbjct: 1702 KFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQN 1761
Query: 359 DLRFAIINEPFKMDVGNGNFLEIKNKFLARRFKLLEQALVI 481
D R+ I+NEPFK +V GN+LE+KNKFLARRFKLLEQALVI
Sbjct: 1762 DPRYMILNEPFKSEVHKGNYLEMKNKFLARRFKLLEQALVI 1802
>UniRef50_Q4SNF1 Cluster: Chromosome 8 SCAF14543, whole genome shotgun
sequence; n=2; Euteleostomi|Rep: Chromosome 8 SCAF14543,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1989
Score = 183 bits (445), Expect = 2e-45
Identities = 80/103 (77%), Positives = 93/103 (90%), Gaps = 1/103 (0%)
Frame = +2
Query: 176 RRKFMFNIADGGFTELHTLWLNEERAAAPGRE-YEIWHRRHDYWLLAGIVTHGYGRWQDI 352
+++FMFNIADGGFTELH+LW NEERAA ++ +EIWHRRHDYWLLAGI+ HGY RWQD+
Sbjct: 1739 KQRFMFNIADGGFTELHSLWQNEERAATVTKKTFEIWHRRHDYWLLAGIIQHGYARWQDV 1798
Query: 353 QNDLRFAIINEPFKMDVGNGNFLEIKNKFLARRFKLLEQALVI 481
QND+RFAI+NEPFK ++ GNFLEIKNKFLARRFKLLEQALVI
Sbjct: 1799 QNDVRFAILNEPFKGEMSRGNFLEIKNKFLARRFKLLEQALVI 1841
>UniRef50_Q14839-2 Cluster: Isoform 2 of Q14839 ; n=19;
Euteleostomi|Rep: Isoform 2 of Q14839 - Homo sapiens
(Human)
Length = 1940
Score = 182 bits (444), Expect = 3e-45
Identities = 81/103 (78%), Positives = 92/103 (89%), Gaps = 1/103 (0%)
Frame = +2
Query: 176 RRKFMFNIADGGFTELHTLWLNEERAAAPGRE-YEIWHRRHDYWLLAGIVTHGYGRWQDI 352
+++FMFNIADGGFTELH+LW NEERAA ++ YEIWHRRHDYWLLAGI+ HGY RWQDI
Sbjct: 1721 KQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGIINHGYARWQDI 1780
Query: 353 QNDLRFAIINEPFKMDVGNGNFLEIKNKFLARRFKLLEQALVI 481
QND R+AI+NEPFK ++ GNFLEIKNKFLARRFKLLEQALVI
Sbjct: 1781 QNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVI 1823
>UniRef50_Q12873 Cluster: Chromodomain-helicase-DNA-binding protein 3;
n=124; Eumetazoa|Rep: Chromodomain-helicase-DNA-binding
protein 3 - Homo sapiens (Human)
Length = 2000
Score = 182 bits (443), Expect = 4e-45
Identities = 83/101 (82%), Positives = 89/101 (88%), Gaps = 1/101 (0%)
Frame = +2
Query: 182 KFMFNIADGGFTELHTLWLNEERAA-APGREYEIWHRRHDYWLLAGIVTHGYGRWQDIQN 358
+FMFNIADGGFTELHTLW NEERAA + G+ EIWHRRHDYWLLAGIV HGY RWQDIQN
Sbjct: 1706 RFMFNIADGGFTELHTLWQNEERAAISSGKLNEIWHRRHDYWLLAGIVLHGYARWQDIQN 1765
Query: 359 DLRFAIINEPFKMDVGNGNFLEIKNKFLARRFKLLEQALVI 481
D +FAIINEPFK + GNFLE+KNKFLARRFKLLEQALVI
Sbjct: 1766 DAQFAIINEPFKTEANKGNFLEMKNKFLARRFKLLEQALVI 1806
>UniRef50_Q22516 Cluster: Chromodomain-helicase-DNA-binding protein 3
homolog; n=3; Caenorhabditis|Rep:
Chromodomain-helicase-DNA-binding protein 3 homolog -
Caenorhabditis elegans
Length = 1787
Score = 149 bits (361), Expect = 3e-35
Identities = 67/108 (62%), Positives = 84/108 (77%), Gaps = 6/108 (5%)
Frame = +2
Query: 176 RRKFMFNIADGGFTELHTLWLNEERAAAPGREYEIWHRRHDYWLLAGIVTHGYGRW---- 343
R + FNI DGG+TELH+LW+NEE+ A G+EYEIWHRRHD+WLLA + +GYGR+
Sbjct: 1480 RLPYKFNICDGGYTELHSLWINEEKVARNGKEYEIWHRRHDFWLLAAVAVYGYGRYQINF 1539
Query: 344 QDIQNDLRFAIINEPFKMDVGN--GNFLEIKNKFLARRFKLLEQALVI 481
QDI ND +F+I+NEPFK + NF ++KNKFLARRFKLLEQ+LVI
Sbjct: 1540 QDIMNDPKFSIVNEPFKQTGADPATNFADVKNKFLARRFKLLEQSLVI 1587
>UniRef50_Q4RBP9 Cluster: Chromosome undetermined SCAF20953, whole
genome shotgun sequence; n=3; Euteleostomi|Rep:
Chromosome undetermined SCAF20953, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 559
Score = 106 bits (254), Expect = 3e-22
Identities = 62/130 (47%), Positives = 77/130 (59%), Gaps = 28/130 (21%)
Frame = +2
Query: 176 RRKFMFNIADGGFTELHTLW-LNEERAAAPG-------REYEIW---------------- 283
+ +FMFNIADGGFTELHTLW E A + G R ++ W
Sbjct: 242 KARFMFNIADGGFTELHTLWQTEERAALSSGKMNDIWHRRHDYWLLAGIVTYPLPVAAGA 301
Query: 284 ---HRRHDYWLLAGIV-THGYGRWQDIQNDLRFAIINEPFKMDVGNGNFLEIKNKFLARR 451
+R G + HGY RWQD+QND R+ ++NEPFK ++ GN+LE+KNKFLARR
Sbjct: 302 SWCAQRPSLLSFDGALGRHGYARWQDLQNDPRYGLLNEPFKSEMHKGNYLEMKNKFLARR 361
Query: 452 FKLLEQALVI 481
FKLLEQALVI
Sbjct: 362 FKLLEQALVI 371
>UniRef50_Q9S775 Cluster: CHD3-type chromatin-remodeling factor
PICKLE; n=9; Magnoliophyta|Rep: CHD3-type
chromatin-remodeling factor PICKLE - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1384
Score = 40.7 bits (91), Expect = 0.017
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 260 PG-REYEIWHRRHDYWLLAGIVTHGYGRWQDIQNDLRFAI 376
PG R +IW HD ++ ++ HGYGRWQ I +D I
Sbjct: 1061 PGLRSGKIWKEEHDKIMIRAVLKHGYGRWQAIVDDKELGI 1100
>UniRef50_A7P5Y1 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 891
Score = 39.5 bits (88), Expect = 0.038
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 281 WHRRHDYWLLAGIVTHGYGRWQDIQND 361
W HD LL ++ HGYGRWQ I +D
Sbjct: 503 WKEEHDLLLLRAVIKHGYGRWQAIVDD 529
>UniRef50_A5BRA6 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 755
Score = 39.5 bits (88), Expect = 0.038
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 281 WHRRHDYWLLAGIVTHGYGRWQDIQND 361
W HD LL ++ HGYGRWQ I +D
Sbjct: 367 WKEEHDLLLLRAVIKHGYGRWQAIVDD 393
>UniRef50_A7EMR9 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1505
Score = 35.5 bits (78), Expect = 0.62
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 254 AAPGREYEI-WHRRHDYWLLAGIVTHGYGRWQDIQND 361
A+ G Y W + D LL GI HGYG W I++D
Sbjct: 1198 ASKGAHYSCEWGAKEDGMLLVGIHRHGYGAWTQIRDD 1234
>UniRef50_A6RVJ8 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1357
Score = 35.5 bits (78), Expect = 0.62
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 254 AAPGREYEI-WHRRHDYWLLAGIVTHGYGRWQDIQND 361
A+ G Y W + D LL GI HGYG W I++D
Sbjct: 1053 ASKGAHYSCDWGAKEDGMLLVGIHRHGYGAWTQIRDD 1089
>UniRef50_O14139 Cluster: Chromodomain helicase hrp3; n=2;
Schizosaccharomyces pombe|Rep: Chromodomain helicase hrp3
- Schizosaccharomyces pombe (Fission yeast)
Length = 1388
Score = 35.5 bits (78), Expect = 0.62
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 281 WHRRHDYWLLAGIVTHGYGRWQDIQNDLRFAIINEPFKMD 400
W R D LL+GI HG+G W +I++D + ++ F D
Sbjct: 1123 WGPREDSMLLSGICKHGFGAWLEIRDDPELKMKDKIFLED 1162
>UniRef50_Q8JGS4 Cluster: Telomere repeat factor a; n=5; Danio
rerio|Rep: Telomere repeat factor a - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 575
Score = 35.1 bits (77), Expect = 0.82
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 251 AAAPGREY--EIWHRRHDYWLLAGIVTHGYGRWQDIQNDLRFA 373
+ AP ++Y ++W + WL G+V +G G W+ I++ FA
Sbjct: 513 STAPAKKYTRKMWSVQESEWLKQGVVRYGVGHWERIRSAFPFA 555
>UniRef50_A2YA18 Cluster: Putative uncharacterized protein; n=2; Oryza
sativa|Rep: Putative uncharacterized protein - Oryza
sativa subsp. indica (Rice)
Length = 1364
Score = 35.1 bits (77), Expect = 0.82
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +2
Query: 206 GGFTELHTLWLNEERAAAPGREYEIWHRRHDYWLLAGIVTHGYGRWQDIQND 361
G T+L +L E + G +W D LL ++ HGY RWQ I +D
Sbjct: 1063 GKITKLFPSYLLYEFPSLVGGR--VWKAEQDLLLLKALIKHGYARWQYISDD 1112
>UniRef50_P32657 Cluster: Chromo domain-containing protein 1; n=13;
Saccharomycetales|Rep: Chromo domain-containing protein 1
- Saccharomyces cerevisiae (Baker's yeast)
Length = 1468
Score = 34.7 bits (76), Expect = 1.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 281 WHRRHDYWLLAGIVTHGYGRWQDIQNDLRFAIINEPFKMDVGN 409
W + D LL G+ +GYG W I++D I ++ F +V N
Sbjct: 1175 WTKEEDEKLLIGVFKYGYGSWTQIRDDPFLGITDKIFLNEVHN 1217
>UniRef50_A2ELC4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1041
Score = 33.9 bits (74), Expect = 1.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 272 YEIWHRRHDYWLLAGIVTHGYGRWQDIQND 361
+E W + D LL + THG+G W+DI D
Sbjct: 670 FETWSPKSDASLLHLVYTHGWGNWRDILRD 699
>UniRef50_A7PQX9 Cluster: Chromosome chr6 scaffold_25, whole genome
shotgun sequence; n=4; core eudicotyledons|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 1719
Score = 33.5 bits (73), Expect = 2.5
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 281 WHRRHDYWLLAGIVTHGYGRWQDIQNDLRFAIINEPFKMDV-GNGNFLEIKNKFLARRFK 457
W++ D LL GI HG+G W+ I+ D R + + +++ + FL R
Sbjct: 1367 WNQIDDARLLLGIHYHGFGNWEKIRLDERLGLTKKIAPVELQHHETFLPRAPNLKDRASA 1426
Query: 458 LLEQALV 478
LLE LV
Sbjct: 1427 LLEMELV 1433
>UniRef50_Q5KBX3 Cluster: Transcription regulator, putative; n=2;
Filobasidiella neoformans|Rep: Transcription regulator,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1519
Score = 33.5 bits (73), Expect = 2.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 281 WHRRHDYWLLAGIVTHGYGRWQDIQNDLRFAIINEPFKMD 400
W R D LL GI HG+G W+ I +D + ++ F D
Sbjct: 1228 WTAREDSQLLVGIWKHGFGSWEAIAHDPELHLNDKIFLED 1267
>UniRef50_A7PE46 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 300
Score = 33.1 bits (72), Expect = 3.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 263 GREYEIWHRRHDYWLLAGIVTHGYGRWQDIQNDLRF 370
G + W + L AG+ HG G+W++IQ D F
Sbjct: 2 GNPKQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEF 37
>UniRef50_Q6CSV4 Cluster: Similar to sp|P32657 Saccharomyces
cerevisiae YER164w CHD1 transcriptional regulator; n=2;
Saccharomycetaceae|Rep: Similar to sp|P32657
Saccharomyces cerevisiae YER164w CHD1 transcriptional
regulator - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 1525
Score = 33.1 bits (72), Expect = 3.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 278 IWHRRHDYWLLAGIVTHGYGRWQDIQND 361
+W + D LL GI +GYG W I++D
Sbjct: 1186 VWGKEDDEKLLIGIYKYGYGAWMQIRDD 1213
>UniRef50_Q8VX38 Cluster: Telomere repeat binding factor 2; n=2;
Arabidopsis thaliana|Rep: Telomere repeat binding factor
2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 299
Score = 32.7 bits (71), Expect = 4.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 263 GREYEIWHRRHDYWLLAGIVTHGYGRWQDIQNDLRFAII 379
G + W + L AG++ HG G+W+ I +D F++I
Sbjct: 2 GAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDSEFSLI 40
>UniRef50_Q4P477 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1834
Score = 32.3 bits (70), Expect = 5.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 281 WHRRHDYWLLAGIVTHGYGRWQDIQNDLRFAIINEPF 391
W + D LL GI +G+G W+ I+ D F + + F
Sbjct: 1347 WDAKDDAMLLVGIWKYGFGAWEQIEADPDFGMAGKFF 1383
>UniRef50_Q6ZAY7 Cluster: Putative uncharacterized protein
OJ1540_G08.6; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1540_G08.6 - Oryza sativa subsp. japonica (Rice)
Length = 240
Score = 31.9 bits (69), Expect = 7.7
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 295 RLLAAGRHRDARLRALAGHTKRPAVRYHQRTVQNGRRQW 411
RL AA RHR R R L+ +R R R ++ RR+W
Sbjct: 106 RLHAAPRHRTTRHRLLSATPRRQTTRPRLRLLRAARRRW 144
>UniRef50_Q54UZ8 Cluster: CHD gene family protein containing
chromodomain, helicase domain, and DNA-binding domain;
n=1; Dictyostelium discoideum AX4|Rep: CHD gene family
protein containing chromodomain, helicase domain, and
DNA-binding domain - Dictyostelium discoideum AX4
Length = 2373
Score = 31.9 bits (69), Expect = 7.7
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 293 HDYWLLAGIVTHGYGRWQDIQND--LRFAIINEPFKMD 400
HD LL G+ HGY +++DI ND L F + + ++D
Sbjct: 1765 HDISLLQGVSKHGYSQYEDICNDQSLPFHELAQSLRLD 1802
>UniRef50_O17909 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1461
Score = 31.9 bits (69), Expect = 7.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 281 WHRRHDYWLLAGIVTHGYGRWQDIQNDLRFAIINEPFKMD 400
W R D LL G+ +GYG W+ I+ D + ++ F D
Sbjct: 1156 WSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKD 1195
>UniRef50_A1D352 Cluster: Chromodomain helicase (Chd1), putative;
n=10; Pezizomycotina|Rep: Chromodomain helicase (Chd1),
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 1523
Score = 31.9 bits (69), Expect = 7.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 281 WHRRHDYWLLAGIVTHGYGRWQDIQND 361
W R D L G+ HG+G W I++D
Sbjct: 1221 WGAREDGMLCVGVARHGWGAWTQIRDD 1247
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 265,523,955
Number of Sequences: 1657284
Number of extensions: 4398023
Number of successful extensions: 13888
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 13590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13875
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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