Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I03
         (423 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q62097 Cluster: Mus musculus ORFs (putative primordial ...    40   0.021
UniRef50_UPI000069ED88 Cluster: UPI000069ED88 related cluster; n...    34   1.4  
UniRef50_Q23WU5 Cluster: Putative uncharacterized protein; n=1; ...    33   1.8  
UniRef50_UPI00015A4429 Cluster: UPI00015A4429 related cluster; n...    32   4.2  
UniRef50_Q4E624 Cluster: Putative uncharacterized protein; n=1; ...    32   5.6  
UniRef50_A6SPI2 Cluster: Putative uncharacterized protein; n=1; ...    31   7.4  
UniRef50_Q7NII7 Cluster: HlyB/MsbA family ABC transporter; n=1; ...    31   9.7  

>UniRef50_Q62097 Cluster: Mus musculus ORFs (putative primordial
           protein), complete cds; n=6; Eukaryota|Rep: Mus musculus
           ORFs (putative primordial protein), complete cds - Mus
           musculus (Mouse)
          Length = 250

 Score = 39.9 bits (89), Expect = 0.021
 Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
 Frame = -1

Query: 423 LS*CM*YHCILAQVAKLYLSVCRYTTRIS*CMQLTLYLS---VSRYTVS*CM*LHCILML 253
           LS C+ Y C+   ++ + LSV  Y + I  C+ L++YLS   +S   +S  + ++   + 
Sbjct: 123 LSICLSYVCLSIYLSIICLSV--YLS-IYLCIYLSIYLSYVCLSSICLSIYLSIYLSYVC 179

Query: 252 VATIYLSTCSYIVS*RKSLHCILVYVATLYLSVCSYTVS*RKSLQCILVYV 100
           +++IYLS   YI+    S  C+L+Y+  +YLS+   ++S      C+ +Y+
Sbjct: 180 LSSIYLSYAVYIIY--LSYVCLLIYLPIIYLSMYLSSIS-----LCVCMYI 223



 Score = 39.5 bits (88), Expect = 0.028
 Identities = 30/106 (28%), Positives = 54/106 (50%)
 Frame = -2

Query: 380 LNCILVYVATLLGYLSVCS*HFILA*VATLYLSACSYTVS*CLSLQYILVHAVTLYLSVS 201
           L+  L YV     YLS+      L+   ++YLS     +S CLS+  + +     Y+ +S
Sbjct: 74  LSIYLSYVCLSSIYLSIYHLSIYLSIYLSIYLSIYLSIMSDCLSIMSVCLSICLSYVCLS 133

Query: 200 RFTVS*CMWLHYILVYAVTLYLSVSRFNVS*CMSLHCILVYVA*YL 63
            +    C+ + Y+ +Y + +YLS+    V  C+S  C+ +Y++ YL
Sbjct: 134 IYLSIICLSV-YLSIY-LCIYLSIYLSYV--CLSSICLSIYLSIYL 175



 Score = 35.1 bits (77), Expect = 0.60
 Identities = 32/123 (26%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
 Frame = -2

Query: 419 LSACSITVS*RKSLNCILVYVAT--LLGYLSVCS*HFILA*VATLYLSACSYTVS*CLSL 246
           LS  S+ +S   S  C+ +Y++   L  YLS+    ++   ++ + LS+   ++   + L
Sbjct: 116 LSIMSVCLSICLSYVCLSIYLSIICLSVYLSIYLCIYLSIYLSYVCLSSICLSIYLSIYL 175

Query: 245 QYILVHAVTLYLSVSRFTVS*CMWLHYI--LVYAVTLYLSVSRFNVS*CMSLHCILVYVA 72
            Y+ + ++  YLS + + +    +L Y+  L+Y   +YLS+   ++S C+ ++ I +YV 
Sbjct: 176 SYVCLSSI--YLSYAVYII----YLSYVCLLIYLPIIYLSMYLSSISLCVCMY-ICMYVC 228

Query: 71  *YL 63
            YL
Sbjct: 229 MYL 231



 Score = 34.3 bits (75), Expect = 1.0
 Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
 Frame = -1

Query: 375 LYLSVCRYTTRI-S*CMQLTL-YLSVSRYTVS*CM*LH-----CILMLVATIYLSTCSYI 217
           +YLS+      I S C+ + L Y+ +S Y    C+ ++     CI + +   Y+   S  
Sbjct: 107 IYLSIMSDCLSIMSVCLSICLSYVCLSIYLSIICLSVYLSIYLCIYLSIYLSYVCLSSIC 166

Query: 216 VS*RKSLHCILVYVATLYLSVCSYTVS*RKSLQCILVYVASLYFSV 79
           +S   S++   V ++++YLS   Y +    S  C+L+Y+  +Y S+
Sbjct: 167 LSIYLSIYLSYVCLSSIYLSYAVYII--YLSYVCLLIYLPIIYLSM 210


>UniRef50_UPI000069ED88 Cluster: UPI000069ED88 related cluster; n=1;
           Xenopus tropicalis|Rep: UPI000069ED88 UniRef100 entry -
           Xenopus tropicalis
          Length = 367

 Score = 33.9 bits (74), Expect = 1.4
 Identities = 23/87 (26%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
 Frame = -2

Query: 320 HFILA*VATLYLSACSYTVS*CLSLQYILVHAVTLYLSVSRFTVS*CMWLHYILVYAVTL 141
           H I+A    L +   S  +S CLS+ ++ ++  ++YLS+   ++   + L   L  +++L
Sbjct: 250 HHIVAPAIYLSIYLSSIYLSICLSIYHLSIYLSSIYLSI-YLSIYLSLSLSLSLSLSLSL 308

Query: 140 YLSV-SRFNVS*CMSLHCILVYVA*YL 63
           YLS+     +S  +S++  ++Y++ YL
Sbjct: 309 YLSIYPSIYLSIYLSVYLSIIYLSIYL 335


>UniRef50_Q23WU5 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 3101

 Score = 33.5 bits (73), Expect = 1.8
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = -1

Query: 201  SLHCILVYVATLYLSVCSYTVS*RKSLQCILVYVASLYF 85
            SL   ++Y+  +YL + SY V  R+S+Q +L+Y AS  F
Sbjct: 2420 SLTIPIIYLIFIYLIIISYGVYRRRSVQVLLIYGASYLF 2458


>UniRef50_UPI00015A4429 Cluster: UPI00015A4429 related cluster; n=1;
           Danio rerio|Rep: UPI00015A4429 UniRef100 entry - Danio
           rerio
          Length = 1023

 Score = 32.3 bits (70), Expect = 4.2
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = -2

Query: 254 LSLQYILVHAVTLYLSVSRFTVS*CMWLHYILVYAVTLYLSVSRFNVS*CM 102
           ++L YIL+ ++ L+  +  + +   + L+YI++Y V LY   S F ++ C+
Sbjct: 271 INLSYILLFSILLFSIILYYIILNYIILYYIVLYYVLLYYVGSFFMINLCL 321


>UniRef50_Q4E624 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 109

 Score = 31.9 bits (69), Expect = 5.6
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = -3

Query: 280 HVATLYLNACRYNIS*YMQLHCILA*VASLYLSVCGYTIS*CMQLHCILA*VASMYLSVC 101
           H+ +LY++AC Y +   M +   +   A +Y+  C Y +  CM +   +   A MY+  C
Sbjct: 10  HLPSLYMDACMY-MDACMYVDACMYVDACMYMDACMY-MDACMYMDACMYMDACMYMDAC 67

Query: 100 RF 95
            +
Sbjct: 68  MY 69


>UniRef50_A6SPI2 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 475

 Score = 31.5 bits (68), Expect = 7.4
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +2

Query: 38  LKVVKNFDQDTKRRTLKYSEATYTKIH*SDL 130
           +K +K + QD +  T  Y+EA Y+KIH S+L
Sbjct: 411 IKCLKIYSQDNEGLTALYAEALYSKIHVSNL 441


>UniRef50_Q7NII7 Cluster: HlyB/MsbA family ABC transporter; n=1;
           Gloeobacter violaceus|Rep: HlyB/MsbA family ABC
           transporter - Gloeobacter violaceus
          Length = 607

 Score = 31.1 bits (67), Expect = 9.7
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
 Frame = -2

Query: 383 SLNCILVYVATLLGYLSVC--S*HFILA*VATLYLSACSYTVS*CLSLQYILVHAVTLYL 210
           +L   +VYV   LGY SVC  S   +LA +ATL + +   T+   + L  ++ +A++LYL
Sbjct: 151 NLQMEVVYVGNTLGYASVCMISVLTLLAYIATLLVVSWKLTLV-IVVLISVIAYAMSLYL 209


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 322,342,650
Number of Sequences: 1657284
Number of extensions: 5141079
Number of successful extensions: 6202
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6155
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)