Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I03
         (423 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   2.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   8.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    20   8.6  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -3

Query: 181 VCGYTIS*CMQLHCILA*VASMYLSVCRFTVF*CTSLSILIEI 53
           V   TI     LH IL  V      +  F V  CTS++ ++ I
Sbjct: 128 VTSTTIKKLFNLHKILVKVVREINGIFAFQVLMCTSMNFVLLI 170



 Score = 21.4 bits (43), Expect = 3.7
 Identities = 13/58 (22%), Positives = 27/58 (46%)
 Frame = -2

Query: 254 LSLQYILVHAVTLYLSVSRFTVS*CMWLHYILVYAVTLYLSVSRFNVS*CMSLHCILV 81
           +  ++ +++ +     V+  T+     LH ILV  V     +  F V  C S++ +L+
Sbjct: 112 IQTRFEMINNIITRGDVTSTTIKKLFNLHKILVKVVREINGIFAFQVLMCTSMNFVLL 169


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 228 CSYIVS*RKSLHCILVYVATL 166
           C++I+    S+  ILVY A+L
Sbjct: 322 CNFIILFYLSVFVILVYYASL 342


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 217 CILA*VASLYLSVCGY 170
           CI + ++SLY  + GY
Sbjct: 235 CITSSLSSLYTCIAGY 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,411
Number of Sequences: 336
Number of extensions: 1696
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)