Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I02
         (601 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    26   0.21 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    25   0.49 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.0  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   2.0  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   2.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   7.9  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   7.9  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   7.9  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +2

Query: 98  NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTR 226
           N +C+   L+   KP+ + E    SC  + T  N  + C  T+
Sbjct: 118 NGECIDKELFCNGKPDCKDESDENSC-TVETDPNRALDCDPTQ 159


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +2

Query: 98  NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTR 226
           N +C+   L+   KP+ + E    SC  + T  N    C  T+
Sbjct: 125 NGECIDKELFCNGKPDCKDESDENSC-TVETDPNRAPDCDPTQ 166


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 12/46 (26%), Positives = 24/46 (52%)
 Frame = -2

Query: 303 DGTGNVLASSGLAEERVEGVVSTPDGLVSWHLTIRLDAVLKAIQLP 166
           D   N L  S + ++ ++G+ ++   ++ WH+T      L+  QLP
Sbjct: 223 DTARNFLTVSKI-KKHIDGMAASKLNVLHWHITDSQSFPLELPQLP 267


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
 Frame = +3

Query: 513 HLPLVR--WWHRFWFHFSPH 566
           HL + R  WWH     F+PH
Sbjct: 87  HLMIHRPNWWHELETKFNPH 106


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 409 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 498
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
 Frame = -3

Query: 296 RGTCLPAPVSLKNVLKESSPPPMV-LSVGI*PSGWMPCSRQYSSQQAFPIWTPAWPTCT 123
           RGT L    +  N L   SPPP+   +VG     W    +   S  + P   P   T T
Sbjct: 33  RGTPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPWKKSPQGAPSPSSTPSSLPTQRTST 91


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 209  RCQLTRPSGVETTPSTRSSARPELASTFPVPS 304
            R   TRP+   TT    ++  P   +T P P+
Sbjct: 1059 RTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPA 1090


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 489 MHRPPGIP 512
           MHRPPG P
Sbjct: 431 MHRPPGDP 438


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 423 SLHHWKGNRRLGPRPHPQTR*PMHRPPGIPH 515
           +L H  G+   G    PQ   P   P  +PH
Sbjct: 73  ALPHLSGDMTHGASISPQNTPPAGYPMDVPH 103


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 423 SLHHWKGNRRLGPRPHPQTR*PMHRPPGIPH 515
           +L H  G+   G    PQ   P   P  +PH
Sbjct: 73  ALPHLSGDMTHGASISPQNTPPAGYPMDVPH 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,976
Number of Sequences: 336
Number of extensions: 3560
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)