Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_I02
(601 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 328 3e-90
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 326 8e-90
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 325 2e-89
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 324 3e-89
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 324 4e-89
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 316 9e-87
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 313 6e-86
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 273 6e-74
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 238 2e-63
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 176 1e-44
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 163 1e-40
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 2e-40
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 160 7e-40
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 154 6e-38
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 142 2e-34
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 138 4e-33
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 137 6e-33
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-26
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 5e-23
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 102 2e-22
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 93 2e-19
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 85 3e-17
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 5e-16
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 60 1e-09
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 56 2e-08
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 50 2e-06
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 33 0.18
SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_33002| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_51769| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_34069| Best HMM Match : ARID (HMM E-Value=4.8e-14) 30 1.6
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 29 2.2
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32) 29 2.9
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_47730| Best HMM Match : Ion_trans (HMM E-Value=1e-14) 29 3.8
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028) 28 6.6
SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 8.8
SB_48462| Best HMM Match : zf-C2H2 (HMM E-Value=1.1e-18) 27 8.8
SB_3316| Best HMM Match : Keratin_B2 (HMM E-Value=0.32) 27 8.8
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 328 bits (805), Expect = 3e-90
Identities = 150/167 (89%), Positives = 154/167 (92%)
Frame = +1
Query: 100 YKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 279
Y+ RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 280 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 459
GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEIVDLV
Sbjct: 492 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLV 551
Query: 460 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
LDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKS
Sbjct: 552 LDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKS 598
Score = 327 bits (803), Expect = 5e-90
Identities = 149/165 (90%), Positives = 153/165 (92%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHYT+GKEIVDLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
RIRKLADQCTGLQGFLIFH LLMERLSVDYGKKS
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKS 165
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 326 bits (801), Expect = 8e-90
Identities = 151/164 (92%), Positives = 152/164 (92%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 288
RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 289 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 468
VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 185
Query: 469 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
IRKLADQCTGLQGFLIFH LLMERLSVDYGKKS
Sbjct: 186 IRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKS 229
Score = 324 bits (797), Expect = 3e-89
Identities = 147/165 (89%), Positives = 153/165 (92%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
RIRKLADQCTGLQGFLIFH LLMERLSVDYGKKS
Sbjct: 706 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKS 750
Score = 165 bits (401), Expect = 2e-41
Identities = 73/81 (90%), Positives = 78/81 (96%)
Frame = +1
Query: 85 VQKTQYKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 264
V + +Y+ RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFF
Sbjct: 507 VPRVEYQ-RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFF 565
Query: 265 SETGAGKHVPRAVFVDLEPTV 327
SETGAGKHVPRAVFVDLEPTV
Sbjct: 566 SETGAGKHVPRAVFVDLEPTV 586
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 325 bits (798), Expect = 2e-89
Identities = 148/164 (90%), Positives = 152/164 (92%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 288
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 289 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 468
VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLDR
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 469 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
IRKLADQCTGLQGFLIFH LLMERLSVDYGKKS
Sbjct: 121 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKS 164
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 324 bits (796), Expect = 3e-89
Identities = 148/165 (89%), Positives = 152/165 (92%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
R RKLADQCTGLQGFLIFH LLMERLSVDYGKKS
Sbjct: 121 RCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKS 165
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 324 bits (795), Expect = 4e-89
Identities = 147/167 (88%), Positives = 153/167 (91%)
Frame = +1
Query: 100 YKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 279
Y+ RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 280 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 459
GKHVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLV
Sbjct: 863 GKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLV 922
Query: 460 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
LDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKS
Sbjct: 923 LDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKS 969
Score = 315 bits (773), Expect = 2e-86
Identities = 141/164 (85%), Positives = 150/164 (91%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 288
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAGKH
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 289 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 468
VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE +D+VLDR
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 469 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
+RKLAD CTGLQGFLIFH LLMERLSVDYGKKS
Sbjct: 493 LRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKS 536
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 316 bits (776), Expect = 9e-87
Identities = 143/165 (86%), Positives = 150/165 (90%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
HVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
R+RKLAD CTGLQGFLIFH LLMERLSVDYGKKS
Sbjct: 121 RLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKS 165
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 313 bits (769), Expect = 6e-86
Identities = 138/167 (82%), Positives = 152/167 (91%)
Frame = +1
Query: 100 YKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 279
Y+ REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 280 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 459
GKHVPRAVFVDLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK+ +D V
Sbjct: 477 GKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNV 536
Query: 460 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
LDRIRKLADQC+GLQGFL+FH LL+ERLSVDYGKKS
Sbjct: 537 LDRIRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDYGKKS 583
Score = 287 bits (705), Expect = 4e-78
Identities = 128/150 (85%), Positives = 137/150 (91%)
Frame = +1
Query: 151 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 330
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVF DLEPTVV
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 331 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 510
DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK+++++VLDR+RKLADQCTGLQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 511 LIFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
LIFH LLMERLSVDYGKKS
Sbjct: 121 LIFHSFGGGTGSGFSSLLMERLSVDYGKKS 150
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 273 bits (670), Expect = 6e-74
Identities = 131/165 (79%), Positives = 136/165 (82%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
HVPRAVFVDLEPTVV PEQLITGKEDAANNYARGHYTIGK+ VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
R+RKLADQC+GLQGF IFH LLMERLSVDYGKKS
Sbjct: 111 RLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVDYGKKS 155
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 238 bits (583), Expect = 2e-63
Identities = 108/130 (83%), Positives = 116/130 (89%)
Frame = +1
Query: 211 MPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG 390
MP+DKTIGGGDDSFNTFF+ETGAGKHVPRAVFVDLEPTV+DE+RTGTYRQLFHPEQL++G
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSG 60
Query: 391 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 570
KEDAANNYARGHYT+GKE +DL LDRIRKLADQCTGLQGFLIFH LLME
Sbjct: 61 KEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLME 120
Query: 571 RLSVDYGKKS 600
RLSVDYGKKS
Sbjct: 121 RLSVDYGKKS 130
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 176 bits (428), Expect = 1e-44
Identities = 79/112 (70%), Positives = 92/112 (82%)
Frame = +1
Query: 265 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 444
SE AGK+VPRAV VDLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHYTIGKE
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 445 IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
+V++V+D+IRK+ DQC+GLQGFLIFH L+ E LSVDYGKKS
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLSVDYGKKS 1076
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 163 bits (396), Expect = 1e-40
Identities = 75/92 (81%), Positives = 79/92 (85%)
Frame = +1
Query: 325 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 504
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQ
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQ 70
Query: 505 GFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
GFLIFH LLMERLSVDYGKKS
Sbjct: 71 GFLIFHSFGGGTGSGFSSLLMERLSVDYGKKS 102
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 162 bits (394), Expect = 2e-40
Identities = 71/79 (89%), Positives = 75/79 (94%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 286 HVPRAVFVDLEPTVVDEVR 342
HVPRAVFVDLEP+VV ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 160 bits (389), Expect = 7e-40
Identities = 74/89 (83%), Positives = 77/89 (86%)
Frame = +1
Query: 334 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 513
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQGFL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFL 61
Query: 514 IFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
IFH LLMERLSVDYGKKS
Sbjct: 62 IFHSFGGGTGSGFSSLLMERLSVDYGKKS 90
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 154 bits (373), Expect = 6e-38
Identities = 70/89 (78%), Positives = 75/89 (84%)
Frame = +1
Query: 334 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 513
E+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE +DL LDRIRKLADQCTGLQGFL
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFL 61
Query: 514 IFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
IFH LLMERLSVDYGKKS
Sbjct: 62 IFHSFGGGTGSGFSSLLMERLSVDYGKKS 90
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 142 bits (344), Expect = 2e-34
Identities = 69/166 (41%), Positives = 95/166 (57%)
Frame = +1
Query: 91 KTQYKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 270
K +KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNE 266
Query: 271 TGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIV 450
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+V
Sbjct: 267 ATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELV 326
Query: 451 DLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 588
D VLD +RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 327 DSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 372
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 138 bits (333), Expect = 4e-33
Identities = 66/161 (40%), Positives = 92/161 (57%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 588
+RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 119 VVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 137 bits (332), Expect = 6e-33
Identities = 64/161 (39%), Positives = 94/161 (58%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
+VPR+V +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLD 118
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 588
+RK A+ C +QGF + H LL+ ++ +Y
Sbjct: 119 VVRKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 116 bits (279), Expect = 1e-26
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 286 H 288
H
Sbjct: 256 H 256
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/42 (64%), Positives = 29/42 (69%)
Frame = +1
Query: 475 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
K ADQCTGLQGFL+FH LLMERLSVDYGK+S
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDYGKRS 296
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 104 bits (250), Expect = 5e-23
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +1
Query: 334 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 480
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 102 bits (245), Expect = 2e-22
Identities = 46/103 (44%), Positives = 65/103 (63%)
Frame = +1
Query: 280 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 459
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 460 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 588
LD +RK A+ C +QGF + H LL+ ++ +Y
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEY 104
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = +1
Query: 334 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 480
EVR GTYR LFHP+QLITGKEDAANNYARGHYT+GKE +DL L++IRKL
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 85.4 bits (202), Expect = 3e-17
Identities = 35/103 (33%), Positives = 59/103 (57%)
Frame = +1
Query: 280 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 459
G++VPR++ VDLEP +D VR G +F P+ + + AANN+A+GHY+ G E++D +
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNI 72
Query: 460 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 588
D +RK A+ C +QG + L++ ++ +Y
Sbjct: 73 FDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEY 115
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 81.4 bits (192), Expect = 5e-16
Identities = 38/93 (40%), Positives = 53/93 (56%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 384
+VPRA+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/40 (70%), Positives = 28/40 (70%)
Frame = +1
Query: 481 ADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 600
ADQCTGLQGFLIFH LLMERLSVDYGKKS
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKS 40
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +1
Query: 391 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 570
+ AANN+A+G YT G E++D +D IRKLA+ C +QGF I H LL+
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 571 RLSVDY 588
++ +Y
Sbjct: 62 KIREEY 67
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 49.6 bits (113), Expect = 2e-06
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Frame = +1
Query: 118 ISVHVGQAGVQIGNACWELYCLEHGIQPDG-----QMPTDKTIGGGDDSFNTFFSETGAG 282
+++ +GQ G QIG ++L +E + + ++ T ++S FF+
Sbjct: 4 VTLQLGQCGNQIGRELFDLI-VEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 283 KHVPRAVFVDLEPTVVDEV-----RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 447
RAV +D+E V+ + ++GT+R + Q + K + NN+A G G +
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWR--YPKGQQFSQKRGSGNNWAHGFSEHGPKS 120
Query: 448 VDLVLDRIRKLADQCTGLQGFL 513
+D VLD +++ ++C L GFL
Sbjct: 121 IDKVLDLVQREVEKCDRLDGFL 142
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 295 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 414
RAV +D+E VV+ + G +F +QLIT NN+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +2
Query: 113 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF 292
SAS A + + + + S + ++ A + QL + ETTP+T +SA A+T
Sbjct: 196 SASSVIQASSSTSAVVASSSAVIMTNAPKITTTEQLATTTAAETTPTTTTSASTTTATTT 255
Query: 293 PVPSSSI 313
++S+
Sbjct: 256 KATTTSV 262
>SB_33002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 55
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = -2
Query: 426 VTTSIVVCGILLTSDKLFWMKQLSVCASADLV 331
++T IVV IL SDKL +++L+V +SA+L+
Sbjct: 1 MSTGIVVSSILFASDKLLRVEKLAVSSSANLI 32
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 32.3 bits (70), Expect = 0.31
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 230 SGVETTPSTRSSARPELASTFPVPSSS-ILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQ 406
S VETTPST S +P + FPV +SS ++P+ T + ++ +S + P+
Sbjct: 871 SSVETTPST-VSTKPR--TIFPVAASSRTISPVETTPETIPPVET--KSTTISAIESSPR 925
Query: 407 TTMLVVTTP 433
T V TTP
Sbjct: 926 TASTVETTP 934
>SB_51769| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = -2
Query: 426 VTTSIVVCGILLTSDKLFWMKQLSVC 349
++TS++V IL SD+LF M++L++C
Sbjct: 1 MSTSVIVGSILFASDELFRMEELAIC 26
>SB_34069| Best HMM Match : ARID (HMM E-Value=4.8e-14)
Length = 1774
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -2
Query: 600 RLLAVVNGESLHEERSETRTGATTERVEDEESLEACALV 484
RL V++G EER R+ + ER E E E CA V
Sbjct: 1339 RLNHVLHGAKKREERHRLRSSSCNEREERESPCEMCAPV 1377
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG-QMPTDKT-IGGGDDSFNTFFSETGAG 282
+ C S + +GV+ G W L + GIQP P+D + D +NT +
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSDDSDCNVLCDQYNTVLNHF-IE 295
Query: 283 KHVP-RAVFVDLEP 321
KH P R V L P
Sbjct: 296 KHAPVRTFSVTLRP 309
>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
Length = 1027
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 292 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 441
P V+ L T VD+V+TG PEQL+ K++A+ RG + + K
Sbjct: 126 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMERGGFQLHK 171
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 166 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 270
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_47730| Best HMM Match : Ion_trans (HMM E-Value=1e-14)
Length = 904
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 143 ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSI 313
E S+ +C S A+N + L+ P+ + T+ +RSS+ + P+P+SSI
Sbjct: 605 EGGSQQWPHTCTPTSDATNGLP-ASLSLPTVIHTSARSRSSSSSSASLLTPIPTSSI 660
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 187 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 303
+GI+PDGQ D+ +NT F G P A+
Sbjct: 708 NGIRPDGQGLVDEGFKTASGIYNTCFERLGMNFQTPEAI 746
>SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2722
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -2
Query: 579 GESLHEERSETRTGATTERVEDEESLEACALVSEFADAVEDQVYDFLSNGVVT 421
GESL ++ R ATT ++E+C L E ++ + + +++GVVT
Sbjct: 634 GESLLICKTSERAKATTLMKSSLNAVESCLLDKERTGGLKRALLEVIASGVVT 686
>SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028)
Length = 302
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +3
Query: 336 GPHWHIQTVVSSRTTYHW*GGCRKQLCSWSLHHWKGN 446
G HW+ T + HW G + W HW GN
Sbjct: 48 GKHWYGNTGTKTLIWKHWYGNTGTKTLIWK--HWYGN 82
>SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1041
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +3
Query: 462 RPHPQTR*PMHRPP-GIPH 515
RPHP + P RPP G+PH
Sbjct: 436 RPHPPPQQPSPRPPMGVPH 454
>SB_48462| Best HMM Match : zf-C2H2 (HMM E-Value=1.1e-18)
Length = 536
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/38 (28%), Positives = 25/38 (65%)
Frame = -2
Query: 570 LHEERSETRTGATTERVEDEESLEACALVSEFADAVED 457
++EE +++ ++ E + DEES+E+ S F+D +++
Sbjct: 1 MNEEPTDSEGDSSEEDLSDEESIESDGNCSNFSDELQN 38
>SB_3316| Best HMM Match : Keratin_B2 (HMM E-Value=0.32)
Length = 355
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 116 ASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARP 274
A+LYT+ RS + I S+ + +V + RPS ++T T + RP
Sbjct: 245 ATLYTIRPSSHRSTLVTSCTIRPSSHRSTLVTSCIIRPSSHKSTLVTLCTIRP 297
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,276,112
Number of Sequences: 59808
Number of extensions: 478577
Number of successful extensions: 1469
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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