Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_I01
         (583 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    25   0.35 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    25   0.35 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.5  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.4  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   5.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.6  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +1

Query: 451 LTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNKQ 561
           L  +LP  L  +C +CTD  K  A   V Q    NKQ
Sbjct: 62  LKRVLPDALKTSCAKCTDKQKQGA-KTVIQHLYKNKQ 97


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = +1

Query: 409 HQACDLARGYA---ALALTGLLPAVLPDACVRCTDADKPHAIGDVYQLK 546
           + AC L++G      + L  +LP  L   C +CT+  +  A   + +LK
Sbjct: 43  YAACLLSKGPCPPQGVDLKRVLPEALQTNCAKCTEKQRTAAYRSIKRLK 91


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 552 WHFELINVSDGVRL 511
           W +E +NV+DG++L
Sbjct: 238 WAYEKLNVNDGLQL 251


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 371 STRCPEQTPLRTCTRPVTWREDTRRWPSRD 460
           +T CPEQ    T T  V   + T  W + +
Sbjct: 124 TTNCPEQKNTVTVTFTVQSDDTTLNWGTNE 153


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/43 (27%), Positives = 15/43 (34%)
 Frame = +1

Query: 190 SEFGNAYSLARSCPKVQTPEHSHHQMHAALPPACEQVFGGISP 318
           S F N+Y        V + EH H   H        Q  G + P
Sbjct: 3   SYFANSYMPDMRNGGVVSAEHPHQHQHYGAAVQVPQGGGAVQP 45


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +2

Query: 389  QTPLRTCTRPVTWREDTRRWP 451
            Q  L+ C   + W +D   WP
Sbjct: 2259 QLQLQVCPNGLFWNKDHCDWP 2279


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,530
Number of Sequences: 336
Number of extensions: 2835
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)