Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H24
         (560 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089641-1|AAL90379.1|  322|Drosophila melanogaster RE65335p pro...    32   0.61 
AE014298-98|AAF45542.2|  322|Drosophila melanogaster CG13362-PA ...    32   0.61 
AY122170-1|AAM52682.1| 1517|Drosophila melanogaster LD28815p pro...    29   4.3  
AE014296-151|AAF47426.2| 1517|Drosophila melanogaster CG32479-PA...    29   4.3  

>AY089641-1|AAL90379.1|  322|Drosophila melanogaster RE65335p
           protein.
          Length = 322

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +3

Query: 36  PKYGSYT-YQYSCRSEPYPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGPYVAQTYSQPS 212
           P Y +Y   Q +  SE    S   +Q VPCMCPV+          S A    +Q  +  +
Sbjct: 193 PDYFNYQPQQQTVVSEQGVSSNSRIQFVPCMCPVS---MPSFVSSSTAATLPSQLSTSST 249

Query: 213 YTVSQPVA 236
             VSQP A
Sbjct: 250 SFVSQPAA 257


>AE014298-98|AAF45542.2|  322|Drosophila melanogaster CG13362-PA
           protein.
          Length = 322

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +3

Query: 36  PKYGSYT-YQYSCRSEPYPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGPYVAQTYSQPS 212
           P Y +Y   Q +  SE    S   +Q VPCMCPV+          S A    +Q  +  +
Sbjct: 193 PDYFNYQPQQQTVVSEQGVSSNSRIQFVPCMCPVS---MPSFVSSSTAATLPSQLSTSST 249

Query: 213 YTVSQPVA 236
             VSQP A
Sbjct: 250 SFVSQPAA 257


>AY122170-1|AAM52682.1| 1517|Drosophila melanogaster LD28815p protein.
          Length = 1517

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 132  VAPEEAEKLQEQSGAGPYVAQTYSQPS-YTVSQPVAVASDPSKN 260
            VAP EA K+ +Q  + P +     QP+    + PVA  S P +N
Sbjct: 977  VAPYEASKIAQQQPSHPVLQLAPPQPAQVAAAAPVAQLSSPPQN 1020


>AE014296-151|AAF47426.2| 1517|Drosophila melanogaster CG32479-PA
            protein.
          Length = 1517

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 132  VAPEEAEKLQEQSGAGPYVAQTYSQPS-YTVSQPVAVASDPSKN 260
            VAP EA K+ +Q  + P +     QP+    + PVA  S P +N
Sbjct: 977  VAPYEASKIAQQQPSHPVLQLAPPQPAQVAAAAPVAQLSSPPQN 1020


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,534,675
Number of Sequences: 53049
Number of extensions: 458931
Number of successful extensions: 1252
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)