Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H23
         (475 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    45   2e-06
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    40   4e-05
AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related ...    36   5e-04
AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection...    23   5.4  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   9.5  

>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
           protein protein.
          Length = 257

 Score = 44.8 bits (101), Expect = 2e-06
 Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 2/112 (1%)
 Frame = +1

Query: 145 HNYRRQLLAKGQVSGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTG 324
           HN RR  LA GQ+     A  M  + WDEEL           +  H+  +      +  G
Sbjct: 71  HNTRRSQLALGQLKPFLPAVRMPTLTWDEELAKQAGNNARSCQYQHDSCRNTPVYAW-AG 129

Query: 325 EN--LYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGH 474
           +N  L  +S   +T    +   + SW+NEY   K   L       S P +GH
Sbjct: 130 QNIALAQFSRMTNTISQLISTNIASWWNEYSFTKQEQLNFYPSSNSGPAMGH 181


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 39.9 bits (89), Expect = 4e-05
 Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
 Frame = +1

Query: 145 HNYRRQLLAKGQVSGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRF-QT 321
           HN  R  +A G++  +P+A +M  + WD EL              H  D+   + +F   
Sbjct: 73  HNLNRSNIALGRIRPYPSAVKMPTLTWDPELASLADANARSCNYGH--DRCRATKKFPYA 130

Query: 322 GEN--LYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGH 474
           G+N  +  +     T K  +   + SW++EY D +   +++     S   IGH
Sbjct: 131 GQNIAITQFFGYRFTEKDLIHKFVSSWWSEYLDARPEHVRKYPSSYSGKPIGH 183


>AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related 1
           protein protein.
          Length = 178

 Score = 36.3 bits (80), Expect = 5e-04
 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
 Frame = +1

Query: 145 HNYRRQLLAKGQVSGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRF-QT 321
           HN  R  +A G++  +P+A +M  + WD EL              H  D+   + +F   
Sbjct: 73  HNLNRSNIALGRIRPYPSAVKMPTLTWDPELASLADANARSCNYGH--DRCRATKKFPYA 130

Query: 322 GEN--LYWYSTTDSTYKLNVDNAMESWFNEYKD 414
           G+N  +  +     T K  +   + SW++EY D
Sbjct: 131 GQNIAITQFFGYRFTEKDLIHKFVSSWWSEYLD 163


>AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection
           responsive shortpeptide protein.
          Length = 81

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 87  DVSNTYDHCQNKKRAYGHCS 28
           D   T + C++ KR +G CS
Sbjct: 53  DGQTTINSCEDCKRKFGRCS 72


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = -1

Query: 442  HSVSREHICNLYIH*TNSP--*RCP 374
            H   REH+C + +  T+SP   RCP
Sbjct: 998  HGFFREHLCGMQL--TSSPDCTRCP 1020


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,623
Number of Sequences: 2352
Number of extensions: 9699
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)